RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 UAP1Q16222 522 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 KLHL12Q53G59 568 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 MPV17L2Q567V2 206 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 GLYATL3Q5SZD4 288 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 HIST2H3PS2Q5TEC6 136 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 MINOS1Q5TGZ0 78 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 LCN8Q6JVE9 175 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 SMARCD3Q6STE5 483 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 HIST2H3AQ71DI3 136 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 ZNF767PQ75MW2 155 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 CCNYL1Q8N7R7 359 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 OR4D11Q8NGI4 311 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 CDKL2Q92772 493 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 MAL2Q969L2 176 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 APOBEC3DQ96AK3 386 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 C12orf43Q96C57 262 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 KCTD7Q96MP8 289 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 SHANK2-AS3Q9BTD1 123 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 TOLLIPQ9H0E2 274 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 RRAGDQ9NQL2 400 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 USE1Q9NZ43 259 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 ING4Q9UNL4 249 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 SNX24Q9Y343 169 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 DNAJC15Q9Y5T4 150 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 LHFPL6Q9Y693 200 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 MINOS1-NBL1R4GNA1 71 aa1.98□□□□□ -2.09
TOPBP1-206ENST00000508524 OR11H12B2RN74 326 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 LINC01619G3V211 115 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 BHLHE40O14503 412 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 GMDSO60547 372 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 OR5F1O95221 314 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 IGHV3-11P01762 117 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 TPM1P09493 284 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 CD3GP09693 182 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 TSPAN19P0C672 248 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 ZNF728P0DKX0 622 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 TAS2R31P59538 309 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 PCBD1P61457 104 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 SLC35B1P78383 322 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 CASP8Q14790 479 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 TPTE2P1Q5T6R2 138 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 C1orf134Q5TEV5 83 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 PRAMEF5Q5TYX0 476 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 ULK3Q6PHR2 472 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 C5orf46Q6UWT4 87 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 RBM45Q8IUH3 476 aaKnown RBP1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 LRRC75AQ8NAA5 344 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 OR13D1Q8NGV5 346 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 OR2T27Q8NH04 317 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 PFN4Q8NHR9 129 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 CAPSLQ8WWF8 208 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 UBE2E2Q96LR5 201 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 OR4C12Q96R67 309 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 ZNF426Q9BUY5 554 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 NDEL1Q9GZM8 345 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 ZNF286AQ9HBT8 521 aa1.97□□□□□ -2.09
TOPBP1-206ENST00000508524 IGHV3-72A0A0B4J1Y9 119 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 RFPL4AA6NLU0 287 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 CENPBD1B2RD01 187 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 ZNF736B4DX44 427 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 ZNF878C9JN71 531 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 F5H5K5 113 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 RFPL4AL1F8VTS6 287 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 M0QZK8 103 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 PGRMC1O00264 195 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 FGF16O43320 207 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 S1PR2O95136 353 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 TRBV12-3P01733 135 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 IGHV3-7P01780 117 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 SLC2A1P11166 492 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 PRPS1L1P21108 318 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 F2RP25116 425 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 HTR1DP28221 377 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 RPS27P42677 84 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 ADARB1P78563 741 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 CDK5Q00535 292 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 GNA13Q14344 377 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 MESTQ5EB52 335 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 FAM222AQ5U5X8 452 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 TMEM136Q6ZRR5 245 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 MRPL21Q7Z2W9 205 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 NANOGNBQ7Z5D8 188 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 Q8N6K4 173 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 OR8J2Q8NGG1 315 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 OR5L1Q8NGL2 311 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 OR1S2Q8NGQ3 325 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 AGR3Q8TD06 166 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 TWIST2Q8WVJ9 160 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 PRSS27Q9BQR3 290 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 GGTLC1Q9BX51 225 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 ABCG5Q9H222 651 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 TMEM133Q9H2Q1 129 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 EXOSC4Q9NPD3 245 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 LZTFL1Q9NQ48 299 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 INIPQ9NRY2 104 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 PYCARDQ9ULZ3 195 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 RHBDD3Q9Y3P4 386 aa1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 FCGBPQ9Y6R7 5405 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-206ENST00000508524 A0A1W2PRG6 482 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 GGT3PA6NGU5 568 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms