RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ANKHD1Q8IWZ3 2542 aaKnown RBP11.86□□□□□ -0.51
DDX41-208ENST00000507955 LYNX1G3V0Z9 82 aa11.86□□□□□ -0.51
DDX41-208ENST00000507955 TMEM250H0YL14 139 aa11.86□□□□□ -0.51
DDX41-208ENST00000507955 LYNX1P0DP58 116 aa11.86□□□□□ -0.51
DDX41-208ENST00000507955 GALR1P47211 349 aa11.86□□□□□ -0.51
DDX41-208ENST00000507955 RAB7AP51149 207 aa11.86□□□□□ -0.51
DDX41-208ENST00000507955 C14orf144Q96I85 54 aa11.86□□□□□ -0.51
DDX41-208ENST00000507955 PCGF1Q9BSM1 259 aa11.86□□□□□ -0.51
DDX41-208ENST00000507955 AURKAIP1Q9NWT8 199 aaPredicted RBP11.86□□□□□ -0.51
DDX41-208ENST00000507955 PITPNC1Q9UKF7 332 aa11.86□□□□□ -0.51
DDX41-208ENST00000507955 TGOLN2O43493 480 aa11.85□□□□□ -0.51
DDX41-208ENST00000507955 TEX36Q5VZQ5 186 aa11.85□□□□□ -0.51
DDX41-208ENST00000507955 OR5T1Q8NG75 326 aa11.85□□□□□ -0.51
DDX41-208ENST00000507955 MGST2Q99735 147 aa11.85□□□□□ -0.51
DDX41-208ENST00000507955 COL25A1Q9BXS0 654 aaPredicted RBP11.85□□□□□ -0.51
DDX41-208ENST00000507955 TRGV8A0A0C4DH27 118 aa11.85□□□□□ -0.51
DDX41-208ENST00000507955 PRSS46E5RG02 174 aa11.85□□□□□ -0.51
DDX41-208ENST00000507955 K7ENP7 123 aa11.85□□□□□ -0.51
DDX41-208ENST00000507955 RBFOX2O43251 390 aaKnown RBP eCLIP11.85□□□□□ -0.516e-7■■■■□ 21.9
DDX41-208ENST00000507955 AMBPP02760 352 aa11.85□□□□□ -0.51
DDX41-208ENST00000507955 TNFRSF1AP19438 455 aa11.85□□□□□ -0.51
DDX41-208ENST00000507955 TMEM200BQ69YZ2 307 aa11.85□□□□□ -0.51
DDX41-208ENST00000507955 TMEM183AQ8IXX5 376 aa11.85□□□□□ -0.51
DDX41-208ENST00000507955 LINC01560Q8TB33 94 aa11.85□□□□□ -0.51
DDX41-208ENST00000507955 ELOVL5Q9NYP7 299 aa11.85□□□□□ -0.51
DDX41-208ENST00000507955 JKAMPQ9P055 326 aa11.85□□□□□ -0.51
DDX41-208ENST00000507955 RPUSD1Q9UJJ7 312 aaKnown RBP11.85□□□□□ -0.51
DDX41-208ENST00000507955 WDR83OSQ9Y284 106 aa11.85□□□□□ -0.51
DDX41-208ENST00000507955 SSUH2Q9Y2M2 353 aa11.85□□□□□ -0.51
DDX41-208ENST00000507955 C15orf61A6NNL5 157 aa11.84□□□□□ -0.51
DDX41-208ENST00000507955 E7EQL1 145 aa11.84□□□□□ -0.51
DDX41-208ENST00000507955 H7BYZ3 331 aa11.84□□□□□ -0.51
DDX41-208ENST00000507955 DEFA6Q01524 100 aa11.84□□□□□ -0.51
DDX41-208ENST00000507955 MLANAQ16655 118 aa11.84□□□□□ -0.51
DDX41-208ENST00000507955 ARSJQ5FYB0 599 aaPredicted RBP11.84□□□□□ -0.51
DDX41-208ENST00000507955 ACTR3CQ9C0K3 210 aaPredicted RBP11.84□□□□□ -0.51
DDX41-208ENST00000507955 ZNF835Q9Y2P0 537 aa11.84□□□□□ -0.51
DDX41-208ENST00000507955 NAV3Q8IVL0 2385 aa11.84□□□□□ -0.51
DDX41-208ENST00000507955 A0A1W2PPQ1 181 aa11.84□□□□□ -0.51
DDX41-208ENST00000507955 CA2P00918 260 aa11.84□□□□□ -0.51
DDX41-208ENST00000507955 CDC34P49427 236 aaPredicted RBP11.84□□□□□ -0.51
DDX41-208ENST00000507955 AARDQ4LEZ3 155 aa11.84□□□□□ -0.51
DDX41-208ENST00000507955 SLC25A48Q6ZT89 311 aaKnown RBP11.84□□□□□ -0.51
DDX41-208ENST00000507955 CTSZQ9UBR2 303 aa11.84□□□□□ -0.51
DDX41-208ENST00000507955 PPIAL4EA0A075B759 164 aa11.83□□□□□ -0.52
DDX41-208ENST00000507955 SHISA9B4DS77 424 aa11.83□□□□□ -0.52
DDX41-208ENST00000507955 PPIAL4DF5H284 164 aa11.83□□□□□ -0.52
DDX41-208ENST00000507955 TMEM178BH3BS89 294 aa11.83□□□□□ -0.52
DDX41-208ENST00000507955 PPIAL4FP0DN26 164 aa11.83□□□□□ -0.52
DDX41-208ENST00000507955 DMRTC2Q8IXT2 367 aaPredicted RBP11.83□□□□□ -0.52
DDX41-208ENST00000507955 OR10W1Q8NGF6 305 aa11.83□□□□□ -0.52
DDX41-208ENST00000507955 OR1P1Q8NH06 330 aa11.83□□□□□ -0.52
DDX41-208ENST00000507955 PPIAL4AQ9Y536 164 aa11.83□□□□□ -0.52
DDX41-208ENST00000507955 hADV38S2A0JD32 116 aa11.83□□□□□ -0.52
DDX41-208ENST00000507955 THBS3P49746 956 aa11.83□□□□□ -0.52
DDX41-208ENST00000507955 RNASE6Q93091 150 aaKnown RBP11.83□□□□□ -0.52
DDX41-208ENST00000507955 MRPL20Q9BYC9 149 aaKnown RBP11.83□□□□□ -0.52
DDX41-208ENST00000507955 MANBALQ9NQG1 85 aa11.83□□□□□ -0.52
DDX41-208ENST00000507955 SLC35D1Q9NTN3 355 aa11.83□□□□□ -0.52
DDX41-208ENST00000507955 TMEM14BQ9NUH8 114 aa11.83□□□□□ -0.52
DDX41-208ENST00000507955 OR51B2Q9Y5P1 312 aa11.83□□□□□ -0.52
DDX41-208ENST00000507955 SPTBN1Q01082 2364 aaKnown RBP11.83□□□□□ -0.52
DDX41-208ENST00000507955 HRASP01112 189 aa11.82□□□□□ -0.52
DDX41-208ENST00000507955 ATP5G3P48201 142 aa11.82□□□□□ -0.52
DDX41-208ENST00000507955 DERL1Q9BUN8 251 aa11.82□□□□□ -0.52
DDX41-208ENST00000507955 TMEM106BQ9NUM4 274 aa11.82□□□□□ -0.52
DDX41-208ENST00000507955 RALYQ9UKM9 306 aaKnown RBP11.82□□□□□ -0.52
DDX41-208ENST00000507955 MALRD1Q5VYJ5 2156 aa11.82□□□□□ -0.52
DDX41-208ENST00000507955 XKRY2A2RUG3 117 aa11.82□□□□□ -0.52
DDX41-208ENST00000507955 E7EUB6 86 aa11.82□□□□□ -0.52
DDX41-208ENST00000507955 C17orf112F2Z3M2 114 aa11.82□□□□□ -0.52
DDX41-208ENST00000507955 MBP02144 154 aa11.82□□□□□ -0.52
DDX41-208ENST00000507955 GZMBP10144 247 aa11.82□□□□□ -0.52
DDX41-208ENST00000507955 HSPE1P61604 102 aaKnown RBP11.82□□□□□ -0.52
DDX41-208ENST00000507955 CDSNQ15517 529 aa11.82□□□□□ -0.52
DDX41-208ENST00000507955 SPATA31B1PQ5VZV4 182 aa11.82□□□□□ -0.52
DDX41-208ENST00000507955 GGTLC1Q9BX51 225 aa11.82□□□□□ -0.52
DDX41-208ENST00000507955 DYNLRB1Q9NP97 96 aa11.82□□□□□ -0.52
DDX41-208ENST00000507955 LINC00312Q9Y6C7 94 aa11.82□□□□□ -0.52
DDX41-208ENST00000507955 PXMP4Q9Y6I8 212 aa11.82□□□□□ -0.52
DDX41-208ENST00000507955 PGPEP1LA6NFU8 196 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 FAM90A27PA6NNH2 459 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 C11orf94C9JXX5 98 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 PPP5D1E7EU14 171 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 DVL1O14640 695 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 GATA2P23769 480 aaPredicted RBP11.81□□□□□ -0.52
DDX41-208ENST00000507955 PDLIM3Q53GG5 364 aaPredicted RBP11.81□□□□□ -0.52
DDX41-208ENST00000507955 CST9LP1Q5W188 147 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 ZNF600Q6ZNG1 722 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 SLC24A4Q8NFF2 622 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 OR52E5Q8NH55 327 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 NEIL1Q96FI4 390 aaPredicted RBP11.81□□□□□ -0.52
DDX41-208ENST00000507955 SEPSECSQ9HD40 501 aaKnown RBP11.81□□□□□ -0.52
DDX41-208ENST00000507955 FUT9Q9Y231 359 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 RAXQ9Y2V3 346 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 NKX6-3A6NJ46 265 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 J3QR06 171 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 SAA1P0DJI8 122 aaPredicted RBP11.81□□□□□ -0.52
DDX41-208ENST00000507955 NPY1RP25929 384 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 CHRNA7P36544 502 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms