RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TMEM140Q9NV12 185 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 COX11Q9Y6N1 276 aa14.64□□□□□ -0.07
NUP54-205ENST00000507257 WNT9BO14905 357 aa14.63□□□□□ -0.07
NUP54-205ENST00000507257 CRYBB3P26998 211 aa14.63□□□□□ -0.07
NUP54-205ENST00000507257 PPOXP50336 477 aa14.63□□□□□ -0.07
NUP54-205ENST00000507257 SMIM21Q3B7S5 101 aa14.63□□□□□ -0.07
NUP54-205ENST00000507257 SAPCD1Q5SSQ6 148 aa14.63□□□□□ -0.07
NUP54-205ENST00000507257 STUMQ69YW2 141 aa14.63□□□□□ -0.07
NUP54-205ENST00000507257 TMEM251Q8N6I4 163 aa14.63□□□□□ -0.07
NUP54-205ENST00000507257 ZNF738Q8NE65 137 aa14.63□□□□□ -0.07
NUP54-205ENST00000507257 CT55Q8WUE5 264 aa14.63□□□□□ -0.07
NUP54-205ENST00000507257 IGF2BP2-AS1Q96M15 143 aa14.63□□□□□ -0.07
NUP54-205ENST00000507257 TECRQ9NZ01 308 aaKnown RBP14.63□□□□□ -0.07
NUP54-205ENST00000507257 FOXA2Q9Y261 457 aaPredicted RBP14.63□□□□□ -0.07
NUP54-205ENST00000507257 MYO15AQ9UKN7 3530 aa14.63□□□□□ -0.07
NUP54-205ENST00000507257 IGHV3-43A0A0B4J1X8 118 aa14.62□□□□□ -0.07
NUP54-205ENST00000507257 A0A1W2PRE2 83 aa14.62□□□□□ -0.07
NUP54-205ENST00000507257 IGLV2-8P01709 118 aa14.62□□□□□ -0.07
NUP54-205ENST00000507257 IGHV3-43DP0DP04 118 aa14.62□□□□□ -0.07
NUP54-205ENST00000507257 VASH2Q86V25 355 aa14.62□□□□□ -0.07
NUP54-205ENST00000507257 APCSP02743 223 aa14.62□□□□□ -0.07
NUP54-205ENST00000507257 CDKN1BP46527 198 aa14.62□□□□□ -0.07
NUP54-205ENST00000507257 HSPE1P61604 102 aaKnown RBP14.62□□□□□ -0.07
NUP54-205ENST00000507257 KLF5Q13887 457 aaPredicted RBP14.62□□□□□ -0.07
NUP54-205ENST00000507257 PSG5Q15238 335 aa14.62□□□□□ -0.07
NUP54-205ENST00000507257 IBA57Q5T440 356 aaKnown RBP14.62□□□□□ -0.07
NUP54-205ENST00000507257 WDR82Q6UXN9 313 aa14.62□□□□□ -0.07
NUP54-205ENST00000507257 MIR17HGQ75NE6 70 aa14.62□□□□□ -0.07
NUP54-205ENST00000507257 C18orf32Q8TCD1 76 aa14.62□□□□□ -0.07
NUP54-205ENST00000507257 C22orf15Q8WYQ4 148 aa14.62□□□□□ -0.07
NUP54-205ENST00000507257 DDB2Q92466 427 aa14.62□□□□□ -0.07
NUP54-205ENST00000507257 RNASE7Q9H1E1 156 aaKnown RBP14.62□□□□□ -0.07
NUP54-205ENST00000507257 ZNF576Q9H609 170 aa14.62□□□□□ -0.07
NUP54-205ENST00000507257 FSCN3Q9NQT6 498 aa14.62□□□□□ -0.07
NUP54-205ENST00000507257 TMEM14BQ9NUH8 114 aa14.62□□□□□ -0.07
NUP54-205ENST00000507257 TRAV9-2A0A087WT02 112 aa14.61□□□□□ -0.07
NUP54-205ENST00000507257 IGHV1-69-2A0A0G2JMI3 117 aa14.61□□□□□ -0.07
NUP54-205ENST00000507257 M0R1X1 148 aa14.61□□□□□ -0.07
NUP54-205ENST00000507257 ATP5IP56385 69 aaPredicted RBP14.61□□□□□ -0.07
NUP54-205ENST00000507257 TBR1Q16650 682 aa14.61□□□□□ -0.07
NUP54-205ENST00000507257 ABHD17BQ5VST6 288 aa14.61□□□□□ -0.07
NUP54-205ENST00000507257 PMS2CLQ68D20 193 aa14.61□□□□□ -0.07
NUP54-205ENST00000507257 C6orf15Q6UXA7 325 aaPredicted RBP14.61□□□□□ -0.07
NUP54-205ENST00000507257 FAM231DQ6ZW35 169 aa14.61□□□□□ -0.07
NUP54-205ENST00000507257 DOLPP1Q86YN1 238 aa14.61□□□□□ -0.07
NUP54-205ENST00000507257 OR4S2Q8NH73 311 aa14.61□□□□□ -0.07
NUP54-205ENST00000507257 S1PR3Q99500 378 aa14.61□□□□□ -0.07
NUP54-205ENST00000507257 OBP2BQ9NPH6 170 aa14.61□□□□□ -0.07
NUP54-205ENST00000507257 TUBG2Q9NRH3 451 aa14.61□□□□□ -0.07
NUP54-205ENST00000507257 ABI3Q9P2A4 366 aa14.61□□□□□ -0.07
NUP54-205ENST00000507257 R4GN57 208 aa14.61□□□□□ -0.07
NUP54-205ENST00000507257 CACNA1DQ01668 2161 aa14.61□□□□□ -0.07
NUP54-205ENST00000507257 CELA3BP08861 270 aa14.6□□□□□ -0.07
NUP54-205ENST00000507257 GNG10P50151 68 aa14.6□□□□□ -0.07
NUP54-205ENST00000507257 TAS2R45P59539 299 aa14.6□□□□□ -0.07
NUP54-205ENST00000507257 KIAA1644Q3SXP7 199 aa14.6□□□□□ -0.07
NUP54-205ENST00000507257 ZNF826PQ6ZT77 177 aa14.6□□□□□ -0.07
NUP54-205ENST00000507257 KLF14Q8TD94 323 aaPredicted RBP14.6□□□□□ -0.07
NUP54-205ENST00000507257 NABP2Q9BQ15 211 aa14.6□□□□□ -0.07
NUP54-205ENST00000507257 ZNF331Q9NQX6 463 aaPredicted RBP14.6□□□□□ -0.07
NUP54-205ENST00000507257 TRAV3A0A0B4J244 114 aa14.6□□□□□ -0.07
NUP54-205ENST00000507257 IGHV2OR16-5A0A0B4J2B6 119 aa14.6□□□□□ -0.07
NUP54-205ENST00000507257 DEFB108AA8MXU0 73 aa14.6□□□□□ -0.07
NUP54-205ENST00000507257 F2RL2O00254 374 aa14.6□□□□□ -0.07
NUP54-205ENST00000507257 IGFBP2P18065 325 aa14.6□□□□□ -0.07
NUP54-205ENST00000507257 OR8B3Q8NGG8 313 aa14.6□□□□□ -0.07
NUP54-205ENST00000507257 RFESDQ8TAC1 157 aa14.6□□□□□ -0.07
NUP54-205ENST00000507257 OR8B2Q96RD0 313 aa14.6□□□□□ -0.07
NUP54-205ENST00000507257 CLEC7AQ9BXN2 247 aa14.6□□□□□ -0.07
NUP54-205ENST00000507257 C12orf49Q9H741 205 aa14.6□□□□□ -0.07
NUP54-205ENST00000507257 H0YJW9 148 aa14.59□□□□□ -0.07
NUP54-205ENST00000507257 RPS20P60866 119 aaKnown RBP14.59□□□□□ -0.07
NUP54-205ENST00000507257 POU2AF1Q16633 256 aa14.59□□□□□ -0.07
NUP54-205ENST00000507257 INO80CQ6PI98 192 aaPredicted RBP14.59□□□□□ -0.07
NUP54-205ENST00000507257 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.59□□□□□ -0.07
NUP54-205ENST00000507257 RNASE8Q8TDE3 154 aaKnown RBP14.59□□□□□ -0.07
NUP54-205ENST00000507257 MBD6Q96DN6 1003 aa14.59□□□□□ -0.07
NUP54-205ENST00000507257 ZNF503Q96F45 646 aa14.59□□□□□ -0.07
NUP54-205ENST00000507257 IFI27L2Q9H2X8 130 aa14.59□□□□□ -0.07
NUP54-205ENST00000507257 METRNQ9UJH8 293 aa14.59□□□□□ -0.07
NUP54-205ENST00000507257 PPIAL4AQ9Y536 164 aa14.59□□□□□ -0.07
NUP54-205ENST00000507257 IGHV2-70DA0A0C4DH43 119 aa14.58□□□□□ -0.07
NUP54-205ENST00000507257 IGLC7A0M8Q6 106 aa14.58□□□□□ -0.07
NUP54-205ENST00000507257 GGTLC3B5MD39 225 aa14.58□□□□□ -0.07
NUP54-205ENST00000507257 OR2J3O76001 311 aa14.58□□□□□ -0.07
NUP54-205ENST00000507257 USF1P22415 310 aaPredicted RBP14.58□□□□□ -0.07
NUP54-205ENST00000507257 FAM214BQ7L5A3 538 aa14.58□□□□□ -0.07
NUP54-205ENST00000507257 MUC15Q8N387 334 aa14.58□□□□□ -0.07
NUP54-205ENST00000507257 OR4F17Q8NGA8 305 aa14.58□□□□□ -0.07
NUP54-205ENST00000507257 ZPBPQ9BS86 351 aa14.58□□□□□ -0.07
NUP54-205ENST00000507257 HES7Q9BYE0 225 aa14.58□□□□□ -0.07
NUP54-205ENST00000507257 WNT10AQ9GZT5 417 aa14.58□□□□□ -0.07
NUP54-205ENST00000507257 ENY2Q9NPA8 101 aa14.58□□□□□ -0.07
NUP54-205ENST00000507257 C1RLQ9NZP8 487 aa14.58□□□□□ -0.07
NUP54-205ENST00000507257 GNG12Q9UBI6 72 aa14.58□□□□□ -0.07
NUP54-205ENST00000507257 MPV17P39210 176 aa14.58□□□□□ -0.08
NUP54-205ENST00000507257 FXYD3Q14802 87 aa14.58□□□□□ -0.08
NUP54-205ENST00000507257 SAP30LQ9HAJ7 183 aa14.58□□□□□ -0.08
NUP54-205ENST00000507257 DOCK7Q96N67 2140 aa14.58□□□□□ -0.08
NUP54-205ENST00000507257 IGHV3-64DA0A0J9YX35 117 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms