RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 TRIQKQ629K1 86 aa12.89□□□□□ -0.35
SNCA-209ENST00000506244 CTRB2Q6GPI1 263 aa12.89□□□□□ -0.35
SNCA-209ENST00000506244 GDPD1Q8N9F7 314 aa12.89□□□□□ -0.35
SNCA-209ENST00000506244 OR4A16Q8NH70 328 aa12.89□□□□□ -0.35
SNCA-209ENST00000506244 LSM10Q969L4 123 aaKnown RBP12.89□□□□□ -0.35
SNCA-209ENST00000506244 TMEM56Q96MV1 263 aa12.89□□□□□ -0.35
SNCA-209ENST00000506244 C5orf66Q9H5L9 145 aa12.89□□□□□ -0.35
SNCA-209ENST00000506244 NAA60Q9H7X0 242 aa12.89□□□□□ -0.35
SNCA-209ENST00000506244 AKIP1Q9NQ31 210 aa12.89□□□□□ -0.35
SNCA-209ENST00000506244 TMEM14BQ9NUH8 114 aa12.89□□□□□ -0.35
SNCA-209ENST00000506244 A0A1B0GW64 132 aa12.88□□□□□ -0.35
SNCA-209ENST00000506244 IGLC7A0M8Q6 106 aa12.88□□□□□ -0.35
SNCA-209ENST00000506244 SEC14L6B5MCN3 397 aa12.88□□□□□ -0.35
SNCA-209ENST00000506244 E7EUB6 86 aa12.88□□□□□ -0.35
SNCA-209ENST00000506244 OVOL1O14753 267 aa12.88□□□□□ -0.35
SNCA-209ENST00000506244 RBMXL2O75526 392 aaKnown RBP12.88□□□□□ -0.35
SNCA-209ENST00000506244 IGKV1-39P01597 117 aa12.88□□□□□ -0.35
SNCA-209ENST00000506244 IGKV1D-39P04432 117 aa12.88□□□□□ -0.35
SNCA-209ENST00000506244 MYOD1P15172 320 aa12.88□□□□□ -0.35
SNCA-209ENST00000506244 UCP1P25874 307 aa12.88□□□□□ -0.35
SNCA-209ENST00000506244 INSL3P51460 131 aa12.88□□□□□ -0.35
SNCA-209ENST00000506244 ZNF45Q02386 682 aa12.88□□□□□ -0.35
SNCA-209ENST00000506244 ZNF343Q6P1L6 599 aa12.88□□□□□ -0.35
SNCA-209ENST00000506244 RNASE11Q8TAA1 199 aaKnown RBP12.88□□□□□ -0.35
SNCA-209ENST00000506244 SRRQ9GZT4 340 aa12.88□□□□□ -0.35
SNCA-209ENST00000506244 PEF1Q9UBV8 284 aaKnown RBP12.88□□□□□ -0.35
SNCA-209ENST00000506244 GPR132Q9UNW8 380 aa12.88□□□□□ -0.35
SNCA-209ENST00000506244 TEX50A0A1B0GTY4 177 aa12.87□□□□□ -0.35
SNCA-209ENST00000506244 CRYM-AS1A6NIL9 109 aa12.87□□□□□ -0.35
SNCA-209ENST00000506244 WIPF1O43516 503 aa12.87□□□□□ -0.35
SNCA-209ENST00000506244 OR2J3O76001 311 aa12.87□□□□□ -0.35
SNCA-209ENST00000506244 PRH1P02810 166 aa12.87□□□□□ -0.35
SNCA-209ENST00000506244 HOXD3P31249 432 aaPredicted RBP12.87□□□□□ -0.35
SNCA-209ENST00000506244 SLURP1P55000 103 aa12.87□□□□□ -0.35
SNCA-209ENST00000506244 DEFA5Q01523 94 aa12.87□□□□□ -0.35
SNCA-209ENST00000506244 DHODHQ02127 395 aa12.87□□□□□ -0.35
SNCA-209ENST00000506244 C15orf32Q32M92 178 aa12.87□□□□□ -0.35
SNCA-209ENST00000506244 ZNF57Q68EA5 555 aaPredicted RBP12.87□□□□□ -0.35
SNCA-209ENST00000506244 SGPP2Q8IWX5 399 aa12.87□□□□□ -0.35
SNCA-209ENST00000506244 RRNAD1Q96FB5 475 aaKnown RBP12.87□□□□□ -0.35
SNCA-209ENST00000506244 RTBDNQ9BSG5 229 aaPredicted RBP12.87□□□□□ -0.35
SNCA-209ENST00000506244 HINT2Q9BX68 163 aa12.87□□□□□ -0.35
SNCA-209ENST00000506244 TMEM222Q9H0R3 208 aa12.87□□□□□ -0.35
SNCA-209ENST00000506244 NDUFA4L2Q9NRX3 87 aa12.87□□□□□ -0.35
SNCA-209ENST00000506244 THYN1Q9P016 225 aa12.87□□□□□ -0.35
SNCA-209ENST00000506244 NSG2Q9Y328 171 aa12.87□□□□□ -0.35
SNCA-209ENST00000506244 PIGBOS1A0A0B4J2F0 54 aa12.86□□□□□ -0.35
SNCA-209ENST00000506244 ANKRD34BA5PLL1 514 aa12.86□□□□□ -0.35
SNCA-209ENST00000506244 CGB1A6NKQ9 187 aa12.86□□□□□ -0.35
SNCA-209ENST00000506244 REG1AP05451 166 aa12.86□□□□□ -0.35
SNCA-209ENST00000506244 OR5AC1P0C628 307 aa12.86□□□□□ -0.35
SNCA-209ENST00000506244 MECP2P51608 486 aaKnown RBP12.86□□□□□ -0.35
SNCA-209ENST00000506244 EGFEM1PQ0D2K5 195 aa12.86□□□□□ -0.35
SNCA-209ENST00000506244 KLK9Q2XQG4 91 aa12.86□□□□□ -0.35
SNCA-209ENST00000506244 PDLIM3Q53GG5 364 aaPredicted RBP12.86□□□□□ -0.35
SNCA-209ENST00000506244 FAM219AQ8IW50 185 aa12.86□□□□□ -0.35
SNCA-209ENST00000506244 DCUN1D4Q92564 292 aa12.86□□□□□ -0.35
SNCA-209ENST00000506244 FBXL7Q9UJT9 491 aa12.86□□□□□ -0.35
SNCA-209ENST00000506244 KLK9Q9UKQ9 250 aa12.86□□□□□ -0.35
SNCA-209ENST00000506244 KCNIP3Q9Y2W7 256 aa12.86□□□□□ -0.35
SNCA-209ENST00000506244 OR13C7P0DN81 318 aa12.85□□□□□ -0.35
SNCA-209ENST00000506244 ANXA3P12429 323 aa12.85□□□□□ -0.35
SNCA-209ENST00000506244 RPEL1Q2QD12 228 aa12.85□□□□□ -0.35
SNCA-209ENST00000506244 SP6Q3SY56 376 aa12.85□□□□□ -0.35
SNCA-209ENST00000506244 ZNF429Q86V71 674 aa12.85□□□□□ -0.35
SNCA-209ENST00000506244 OR1L6Q8NGR2 347 aa12.85□□□□□ -0.35
SNCA-209ENST00000506244 DLX4Q92988 240 aaPredicted RBP12.85□□□□□ -0.35
SNCA-209ENST00000506244 RBPMSQ93062 196 aaKnown RBP12.85□□□□□ -0.35
SNCA-209ENST00000506244 EEF1AKMT3Q96AZ1 226 aa12.85□□□□□ -0.35
SNCA-209ENST00000506244 CXorf58Q96LI9 332 aa12.85□□□□□ -0.35
SNCA-209ENST00000506244 SLC25A21Q9BQT8 299 aaPredicted RBP12.85□□□□□ -0.35
SNCA-209ENST00000506244 PDCD10Q9BUL8 212 aa12.85□□□□□ -0.35
SNCA-209ENST00000506244 IGLV11-55A0A075B6I3 123 aa12.84□□□□□ -0.35
SNCA-209ENST00000506244 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.84□□□□□ -0.35
SNCA-209ENST00000506244 NAP1L6A6NFF2 107 aa12.84□□□□□ -0.35
SNCA-209ENST00000506244 CDS2O95674 445 aa12.84□□□□□ -0.35
SNCA-209ENST00000506244 IGKV1-5P01602 117 aa12.84□□□□□ -0.35
SNCA-209ENST00000506244 SRPXP78539 464 aa12.84□□□□□ -0.35
SNCA-209ENST00000506244 PRCDQ00LT1 54 aa12.84□□□□□ -0.35
SNCA-209ENST00000506244 TATDN3Q17R31 274 aa12.84□□□□□ -0.35
SNCA-209ENST00000506244 OR10W1Q8NGF6 305 aa12.84□□□□□ -0.35
SNCA-209ENST00000506244 GALNT14Q96FL9 552 aa12.84□□□□□ -0.35
SNCA-209ENST00000506244 FANCD2OSQ96PS1 177 aa12.84□□□□□ -0.35
SNCA-209ENST00000506244 ELOVL1Q9BW60 279 aa12.84□□□□□ -0.35
SNCA-209ENST00000506244 TRBV7-1A0A0A6YYK4 115 aa12.83□□□□□ -0.36
SNCA-209ENST00000506244 SAP30O75446 220 aa12.83□□□□□ -0.36
SNCA-209ENST00000506244 P0C879 139 aa12.83□□□□□ -0.36
SNCA-209ENST00000506244 HSPE1P61604 102 aaKnown RBP12.83□□□□□ -0.36
SNCA-209ENST00000506244 WT1-ASQ06250 92 aa12.83□□□□□ -0.36
SNCA-209ENST00000506244 C19orf35Q6ZS72 473 aa12.83□□□□□ -0.36
SNCA-209ENST00000506244 LINC00299Q6ZSB3 139 aa12.83□□□□□ -0.36
SNCA-209ENST00000506244 SLC35G3Q8N808 338 aa12.83□□□□□ -0.36
SNCA-209ENST00000506244 GLYATL2Q8WU03 294 aa12.83□□□□□ -0.36
SNCA-209ENST00000506244 IL22RA2Q969J5 263 aa12.83□□□□□ -0.36
SNCA-209ENST00000506244 PLEKHA3Q9HB20 300 aa12.83□□□□□ -0.36
SNCA-209ENST00000506244 AURKAIP1Q9NWT8 199 aaPredicted RBP12.83□□□□□ -0.36
SNCA-209ENST00000506244 F11RQ9Y624 299 aaKnown RBP12.83□□□□□ -0.36
SNCA-209ENST00000506244 CENPXA8MT69 81 aa12.82□□□□□ -0.36
SNCA-209ENST00000506244 AKR1C4P17516 323 aa12.82□□□□□ -0.36
SNCA-209ENST00000506244 DCTN2Q13561 401 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 360.3 ms