RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	UPK1B	O75841	260 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	SNAPC5	O75971	98 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	CRYGC	P07315	174 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	LGALS1	P09382	135 aa	Known RBP	6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	PSMB6	P28072	239 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	SLC6A1	P30531	599 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	RUNX1	Q01196	453 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	DHODH	Q02127	395 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	WT1-AS	Q06250	92 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	PPP1R1A	Q13522	171 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	FHL3	Q13643	280 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	ZNF846	Q147U1	533 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	TMEM128	Q5BJH2	165 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	TMEM268	Q5VZI3	342 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282		Q6ZRM9	215 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	MRPL41	Q8IXM3	137 aa	Known RBP	6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	CENPS	Q8N2Z9	138 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	SLC35G3	Q8N808	338 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	OR1L8	Q8NGR8	309 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	TMEM56	Q96MV1	263 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	FANCD2OS	Q96PS1	177 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	TSC22D3	Q99576	134 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	WDR12	Q9GZL7	423 aa	Known RBP	6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	PRND	Q9UKY0	176 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	ZNF257	Q9Y2Q1	563 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	OR51B2	Q9Y5P1	312 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	TMEM56-RWDD3	S4R434	201 aa		6.22	□□□□□ -1.41
EFNA1-205	ENST00000497282	IGHV4OR15-8	A0A075B7B6	117 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282		A0A087WW49	117 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	CENPX	A8MT69	81 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	ST8SIA3	O43173	380 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	OR2J3	O76001	311 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	TRBV12-3	P01733	135 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	TRAPPC2	P0DI81	140 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	TRAPPC2B	P0DI82	140 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	ANXA7	P20073	488 aa	Known RBP	6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	VAMP1	P23763	118 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	MYCNOS	P40205	109 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	MFAP2	P55001	183 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	RHOG	P84095	191 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	KLK9	Q2XQG4	91 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	ANKRD55	Q3KP44	614 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	SPINK9	Q5DT21	86 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	THOC7	Q6I9Y2	204 aa	Known RBP	6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	LYZL2	Q7Z4W2	148 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	ZNF429	Q86V71	674 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	SLC25A42	Q86VD7	318 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	OR11H1	Q8NG94	326 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	OR5B3	Q8NH48	314 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	OR4A16	Q8NH70	328 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	RNASE11	Q8TAA1	199 aa	Known RBP	6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	IL22RA2	Q969J5	263 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	LSM10	Q969L4	123 aa	Known RBP	6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	GPR146	Q96CH1	333 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	SRSF8	Q9BRL6	282 aa	Known RBP	6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	HINT2	Q9BX68	163 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	C20orf85	Q9H1P6	137 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	KLK9	Q9UKQ9	250 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	KCNIP3	Q9Y2W7	256 aa		6.21	□□□□□ -1.42
EFNA1-205	ENST00000497282	IGLV11-55	A0A075B6I3	123 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	MFSD2B	A6NFX1	497 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	FAM223B	A6NKX1	122 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282		G3V4G9	280 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	ATG12	O94817	140 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	NDUFB8	O95169	186 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	SFT2D2	O95562	160 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	OR13C7	P0DN81	318 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	SLURP1	P55000	103 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	PRCD	Q00LT1	54 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	ZNF616	Q08AN1	781 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	ASAH1	Q13510	395 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	EXOSC2	Q13868	293 aa	Known RBP	6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	AARD	Q4LEZ3	155 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	NMS	Q5H8A3	153 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	SAMD5	Q5TGI4	173 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	C11orf87	Q6NUJ2	197 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	ZNF343	Q6P1L6	599 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	C1QL4	Q86Z23	238 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	FAM219A	Q8IW50	185 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	FAM223A	Q8IWN6	122 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	WFDC9	Q8NEX5	89 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	RRNAD1	Q96FB5	475 aa	Known RBP	6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	FKBP11	Q9NYL4	201 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282	CACNG5	Q9UF02	275 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282		S4R3C0	116 aa		6.2	□□□□□ -1.42
EFNA1-205	ENST00000497282		A0A0B4J2A0	478 aa		6.19	□□□□□ -1.42
EFNA1-205	ENST00000497282	C13orf42	A0A1B0GVH6	325 aa		6.19	□□□□□ -1.42
EFNA1-205	ENST00000497282	C9orf170	A2RU37	121 aa		6.19	□□□□□ -1.42
EFNA1-205	ENST00000497282	ANKRD34B	A5PLL1	514 aa		6.19	□□□□□ -1.42
EFNA1-205	ENST00000497282	NXPH3	O95157	252 aa		6.19	□□□□□ -1.42
EFNA1-205	ENST00000497282	HLA-A	P01891	365 aa	Known RBP	6.19	□□□□□ -1.42
EFNA1-205	ENST00000497282	TCRB	P04435	133 aa		6.19	□□□□□ -1.42
EFNA1-205	ENST00000497282	OR4E1	P0C645	316 aa		6.19	□□□□□ -1.42
EFNA1-205	ENST00000497282	ANXA3	P12429	323 aa		6.19	□□□□□ -1.42
EFNA1-205	ENST00000497282	IGLL1	P15814	213 aa		6.19	□□□□□ -1.42
EFNA1-205	ENST00000497282	CD33	P20138	364 aa		6.19	□□□□□ -1.42
EFNA1-205	ENST00000497282	MECP2	P51608	486 aa	Known RBP	6.19	□□□□□ -1.42
EFNA1-205	ENST00000497282	RAB25	P57735	213 aa		6.19	□□□□□ -1.42
EFNA1-205	ENST00000497282	UBE2M	P61081	183 aa	Known RBP	6.19	□□□□□ -1.42
EFNA1-205	ENST00000497282	HSPE1	P61604	102 aa	Known RBP	6.19	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms