RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 C1QCP02747 245 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 PRM2P04554 102 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 HLA-DMBP28068 263 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 FLT4P35916 1363 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 CCL20P78556 96 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 IFITM2Q01629 132 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 GUK1Q16774 197 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 SYPL2Q5VXT5 272 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 ALKAL1Q6UXT8 129 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 Q6ZS49 121 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 TRAPPC5Q8IUR0 188 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 CPAMD8Q8IZJ3 1885 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 LRRC25Q8N386 305 aaPredicted RBP1.53□□□□□ -2.16
SMC4-225ENST00000497203 SPACA4Q8TDM5 124 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 PPP1R14BQ96C90 147 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 DISP1Q96F81 1524 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 DCUN1D1Q96GG9 259 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 WDR61Q9GZS3 305 aaKnown RBP1.53□□□□□ -2.16
SMC4-225ENST00000497203 PRTFDC1Q9NRG1 225 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 IL36BQ9NZH7 164 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 TIMM22Q9Y584 194 aa1.53□□□□□ -2.16
SMC4-225ENST00000497203 V9GYY5 206 aaPredicted RBP1.53□□□□□ -2.16
SMC4-225ENST00000497203 TRGV2A0A075B6R0 118 aa1.52□□□□□ -2.17
SMC4-225ENST00000497203 A0A0D9SEW6 157 aa1.52□□□□□ -2.17
SMC4-225ENST00000497203 GGT3PA6NGU5 568 aa1.52□□□□□ -2.17
SMC4-225ENST00000497203 IGHV3-7P01780 117 aa1.52□□□□□ -2.17
SMC4-225ENST00000497203 PPBPP02775 128 aa1.52□□□□□ -2.17
SMC4-225ENST00000497203 NDUFA5Q16718 116 aa1.52□□□□□ -2.17
SMC4-225ENST00000497203 KRTAP21-3Q3LHN1 58 aa1.52□□□□□ -2.17
SMC4-225ENST00000497203 IBA57Q5T440 356 aaKnown RBP1.52□□□□□ -2.17
SMC4-225ENST00000497203 COA5Q86WW8 74 aa1.52□□□□□ -2.17
SMC4-225ENST00000497203 OR2T4Q8NH00 348 aa1.52□□□□□ -2.17
SMC4-225ENST00000497203 MRPL30Q8TCC3 161 aaKnown RBP1.52□□□□□ -2.17
SMC4-225ENST00000497203 COMMD5Q9GZQ3 224 aa1.52□□□□□ -2.17
SMC4-225ENST00000497203 CST9LQ9H4G1 147 aa1.52□□□□□ -2.17
SMC4-225ENST00000497203 HEATR5AQ86XA9 2040 aa1.52□□□□□ -2.17
SMC4-225ENST00000497203 MEIS3P1A6NDR6 274 aa1.51□□□□□ -2.17
SMC4-225ENST00000497203 OR51F1A6NGY5 319 aa1.51□□□□□ -2.17
SMC4-225ENST00000497203 CLDN24A6NM45 220 aa1.51□□□□□ -2.17
SMC4-225ENST00000497203 FABP5P3A8MUU1 101 aa1.51□□□□□ -2.17
SMC4-225ENST00000497203 HLA-DRB1P01911 266 aa1.51□□□□□ -2.17
SMC4-225ENST00000497203 S100A6P06703 90 aa1.51□□□□□ -2.17
SMC4-225ENST00000497203 HIST1H1TP22492 207 aaPredicted RBP1.51□□□□□ -2.17
SMC4-225ENST00000497203 ANP32AP39687 249 aaKnown RBP1.51□□□□□ -2.17
SMC4-225ENST00000497203 EVX1P49640 407 aa1.51□□□□□ -2.17
SMC4-225ENST00000497203 FXYD2P54710 66 aa1.51□□□□□ -2.17
SMC4-225ENST00000497203 MYL6P60660 151 aa1.51□□□□□ -2.17
SMC4-225ENST00000497203 ACOT6Q3I5F7 207 aaPredicted RBP1.51□□□□□ -2.17
SMC4-225ENST00000497203 TMEM155Q4W5P6 130 aa1.51□□□□□ -2.17
SMC4-225ENST00000497203 SPOPLQ6IQ16 392 aa1.51□□□□□ -2.17
SMC4-225ENST00000497203 RPL22L1Q6P5R6 122 aaKnown RBP1.51□□□□□ -2.17
SMC4-225ENST00000497203 SLC36A1Q7Z2H8 476 aa1.51□□□□□ -2.17
SMC4-225ENST00000497203 CLDN22Q8N7P3 220 aa1.51□□□□□ -2.17
SMC4-225ENST00000497203 MCFD2Q8NI22 146 aa1.51□□□□□ -2.17
SMC4-225ENST00000497203 ZNF625Q96I27 306 aaPredicted RBP1.51□□□□□ -2.17
SMC4-225ENST00000497203 OR8D2Q9GZM6 311 aa1.51□□□□□ -2.17
SMC4-225ENST00000497203 UCK1Q9HA47 277 aa1.51□□□□□ -2.17
SMC4-225ENST00000497203 CISHQ9NSE2 258 aa1.51□□□□□ -2.17
SMC4-225ENST00000497203 CUL9Q8IWT3 2517 aa1.5□□□□□ -2.17
SMC4-225ENST00000497203 SCAF11Q99590 1463 aaKnown RBP1.5□□□□□ -2.17
SMC4-225ENST00000497203 TRBV10-2A0A0K0K1G8 114 aa1.5□□□□□ -2.17
SMC4-225ENST00000497203 PQLC2LA1A4F0 135 aa1.5□□□□□ -2.17
SMC4-225ENST00000497203 KPNA3O00505 521 aaPredicted RBP1.5□□□□□ -2.17
SMC4-225ENST00000497203 CHP2O43745 196 aa1.5□□□□□ -2.17
SMC4-225ENST00000497203 ZNF737O75373 536 aa1.5□□□□□ -2.17
SMC4-225ENST00000497203 RPS17P08708 135 aaKnown RBP1.5□□□□□ -2.17
SMC4-225ENST00000497203 TRGC1P0CF51 173 aa1.5□□□□□ -2.17
SMC4-225ENST00000497203 DEFA4P12838 97 aa1.5□□□□□ -2.17
SMC4-225ENST00000497203 AKR1C3P42330 323 aa1.5□□□□□ -2.17
SMC4-225ENST00000497203 CDKN2CP42773 168 aa1.5□□□□□ -2.17
SMC4-225ENST00000497203 SNRPD2P62316 118 aaKnown RBP1.5□□□□□ -2.17
SMC4-225ENST00000497203 FAM27BQ5VT28 67 aa1.5□□□□□ -2.17
SMC4-225ENST00000497203 LPCAT3Q6P1A2 487 aa1.5□□□□□ -2.17
SMC4-225ENST00000497203 Q6ZRN7 208 aaPredicted RBP1.5□□□□□ -2.17
SMC4-225ENST00000497203 ULBP3Q9BZM4 244 aa1.5□□□□□ -2.17
SMC4-225ENST00000497203 ZFHX2Q9C0A1 2572 aaPredicted RBP1.5□□□□□ -2.17
SMC4-225ENST00000497203 RGS12O14924 1447 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 MAST2Q6P0Q8 1798 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 ORC5O43913 435 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 LYPLA2O95372 231 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 METTL15P1P0C7V9 234 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 HIST1H2BOP23527 126 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 HIST1H2BBP33778 126 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 AQP4P55087 323 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 HIST1H2BDP58876 126 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 HIST1H2BCP62807 126 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 AESQ08117 197 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 STX5Q13190 355 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 HIST2H2BEQ16778 126 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.49□□□□□ -2.17
SMC4-225ENST00000497203 AADACL3Q5VUY0 350 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 ANKRD29Q8N6D5 301 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 ZNF563Q8TA94 476 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 MBD3L1Q8WWY6 194 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 C11orf40Q8WZ69 217 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 HIST1H2BHQ93079 126 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 PPP1R2P1Q96PQ5 205 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 HIST1H2BNQ99877 126 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 HIST1H2BMQ99879 126 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 HSPB9Q9BQS6 159 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms