RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 TEX22C9J3V5 150 aa17.11■□□□□ 0.33
C9orf3-222ENST00000496567 SPCS3P61009 180 aa17.11■□□□□ 0.33
C9orf3-222ENST00000496567 PRCDQ00LT1 54 aa17.11■□□□□ 0.33
C9orf3-222ENST00000496567 IAH1Q2TAA2 248 aaPredicted RBP17.11■□□□□ 0.33
C9orf3-222ENST00000496567 CENPVQ7Z7K6 275 aaPredicted RBP17.11■□□□□ 0.33
C9orf3-222ENST00000496567 MRPL41Q8IXM3 137 aaKnown RBP17.11■□□□□ 0.33
C9orf3-222ENST00000496567 ATRQ13535 2644 aa17.1■□□□□ 0.33
C9orf3-222ENST00000496567 C13orf42A0A1B0GVH6 325 aa17.1■□□□□ 0.33
C9orf3-222ENST00000496567 A0A1W2PN81 502 aa17.1■□□□□ 0.33
C9orf3-222ENST00000496567 C5orf51A6NDU8 294 aa17.1■□□□□ 0.33
C9orf3-222ENST00000496567 CGB1A6NKQ9 187 aa17.1■□□□□ 0.33
C9orf3-222ENST00000496567 FAM25EA8MYX2 175 aa17.1■□□□□ 0.33
C9orf3-222ENST00000496567 G3V318 75 aa17.1■□□□□ 0.33
C9orf3-222ENST00000496567 CCSO14618 274 aa17.1■□□□□ 0.33
C9orf3-222ENST00000496567 PITX3O75364 302 aa17.1■□□□□ 0.33
C9orf3-222ENST00000496567 CHRNA7P36544 502 aa17.1■□□□□ 0.33
C9orf3-222ENST00000496567 GSG1LQ6UXU4 331 aa17.1■□□□□ 0.33
C9orf3-222ENST00000496567 CHAC2Q8WUX2 184 aa17.1■□□□□ 0.33
C9orf3-222ENST00000496567 A0A1B0GW64 132 aa17.09■□□□□ 0.33
C9orf3-222ENST00000496567 PSMB11A5LHX3 300 aa17.09■□□□□ 0.33
C9orf3-222ENST00000496567 HMX3A6NHT5 357 aa17.09■□□□□ 0.33
C9orf3-222ENST00000496567 FAM90A26D6RGX4 464 aa17.09■□□□□ 0.33
C9orf3-222ENST00000496567 PFDN1O60925 122 aa17.09■□□□□ 0.33
C9orf3-222ENST00000496567 RRAS2P62070 204 aaPredicted RBP17.09■□□□□ 0.33
C9orf3-222ENST00000496567 PDLIM3Q53GG5 364 aaPredicted RBP17.09■□□□□ 0.33
C9orf3-222ENST00000496567 KLHDC1Q8N7A1 406 aa17.09■□□□□ 0.33
C9orf3-222ENST00000496567 OR10C1Q96KK4 312 aa17.09■□□□□ 0.33
C9orf3-222ENST00000496567 MED28Q9H204 178 aa17.09■□□□□ 0.33
C9orf3-222ENST00000496567 PLEKHA3Q9HB20 300 aa17.09■□□□□ 0.33
C9orf3-222ENST00000496567 GOSR2O14653 212 aa17.08■□□□□ 0.32
C9orf3-222ENST00000496567 APELAP0DMC3 54 aa17.08■□□□□ 0.32
C9orf3-222ENST00000496567 PROK1P58294 105 aa17.08■□□□□ 0.32
C9orf3-222ENST00000496567 C19orf54Q5BKX5 351 aa17.08■□□□□ 0.32
C9orf3-222ENST00000496567 OR5M8Q8NGP6 311 aa17.08■□□□□ 0.32
C9orf3-222ENST00000496567 ENY2Q9NPA8 101 aa17.08■□□□□ 0.32
C9orf3-222ENST00000496567 HSPB7Q9UBY9 170 aa17.08■□□□□ 0.32
C9orf3-222ENST00000496567 TET2Q6N021 2002 aaPredicted RBP17.08■□□□□ 0.32
C9orf3-222ENST00000496567 PPIFP30405 207 aaKnown RBP17.07■□□□□ 0.32
C9orf3-222ENST00000496567 CFHR3Q02985 330 aa17.07■□□□□ 0.32
C9orf3-222ENST00000496567 TNFRSF9Q07011 255 aa17.07■□□□□ 0.32
C9orf3-222ENST00000496567 FCN2Q15485 313 aa17.07■□□□□ 0.32
C9orf3-222ENST00000496567 C2orf68Q2NKX9 166 aa17.07■□□□□ 0.32
C9orf3-222ENST00000496567 AWAT1Q58HT5 328 aa17.07■□□□□ 0.32
C9orf3-222ENST00000496567 ASPHD1Q5U4P2 390 aa17.07■□□□□ 0.32
C9orf3-222ENST00000496567 TTC9CQ8N5M4 171 aa17.07■□□□□ 0.32
C9orf3-222ENST00000496567 ZBTB8BQ8NAP8 495 aaPredicted RBP17.07■□□□□ 0.32
C9orf3-222ENST00000496567 OR10W1Q8NGF6 305 aa17.07■□□□□ 0.32
C9orf3-222ENST00000496567 C2orf50Q96LR7 162 aa17.07■□□□□ 0.32
C9orf3-222ENST00000496567 GSKIPQ9P0R6 139 aa17.07■□□□□ 0.32
C9orf3-222ENST00000496567 IGLC7A0M8Q6 106 aa17.06■□□□□ 0.32
C9orf3-222ENST00000496567 HAX1O00165 279 aa17.06■□□□□ 0.32
C9orf3-222ENST00000496567 NXPH3O95157 252 aa17.06■□□□□ 0.32
C9orf3-222ENST00000496567 ZNF329Q86UD4 541 aa17.06■□□□□ 0.32
C9orf3-222ENST00000496567 COMMD1Q8N668 190 aa17.06■□□□□ 0.32
C9orf3-222ENST00000496567 OR4D5Q8NGN0 318 aa17.06■□□□□ 0.32
C9orf3-222ENST00000496567 NEURL2Q9BR09 285 aa17.06■□□□□ 0.32
C9orf3-222ENST00000496567 NPIPB5A8MRT5 1133 aa17.06■□□□□ 0.32
C9orf3-222ENST00000496567 CEBPZOSA8MTT3 80 aa17.06■□□□□ 0.32
C9orf3-222ENST00000496567 INS-IGF2F8WCM5 200 aa17.06■□□□□ 0.32
C9orf3-222ENST00000496567 MED6O75586 246 aa17.06■□□□□ 0.32
C9orf3-222ENST00000496567 OR13C7P0DN81 318 aa17.06■□□□□ 0.32
C9orf3-222ENST00000496567 AREGP15514 252 aa17.06■□□□□ 0.32
C9orf3-222ENST00000496567 HOXA1P49639 335 aaPredicted RBP17.06■□□□□ 0.32
C9orf3-222ENST00000496567 ERHP84090 104 aaKnown RBP17.06■□□□□ 0.32
C9orf3-222ENST00000496567 SPINK9Q5DT21 86 aa17.06■□□□□ 0.32
C9orf3-222ENST00000496567 TEX38Q6PEX7 206 aa17.06■□□□□ 0.32
C9orf3-222ENST00000496567 OR5T1Q8NG75 326 aa17.06■□□□□ 0.32
C9orf3-222ENST00000496567 FAM110DQ8TAY7 271 aaPredicted RBP17.06■□□□□ 0.32
C9orf3-222ENST00000496567 MGAT4CQ9UBM8 478 aa17.06■□□□□ 0.32
C9orf3-222ENST00000496567 IGHG4P01861 327 aa17.05■□□□□ 0.32
C9orf3-222ENST00000496567 PSMB6P28072 239 aa17.05■□□□□ 0.32
C9orf3-222ENST00000496567 NKX2-1P43699 371 aaPredicted RBP17.05■□□□□ 0.32
C9orf3-222ENST00000496567 WT1-ASQ06250 92 aa17.05■□□□□ 0.32
C9orf3-222ENST00000496567 CXorf66Q5JRM2 361 aaPredicted RBP17.05■□□□□ 0.32
C9orf3-222ENST00000496567 OR5AU1Q8NGC0 362 aa17.05■□□□□ 0.32
C9orf3-222ENST00000496567 OR11H7Q8NGC8 314 aa17.05■□□□□ 0.32
C9orf3-222ENST00000496567 CRYGCP07315 174 aa17.04■□□□□ 0.32
C9orf3-222ENST00000496567 CYCSP99999 105 aaKnown RBP17.04■□□□□ 0.32
C9orf3-222ENST00000496567 ID3Q02535 119 aa17.04■□□□□ 0.32
C9orf3-222ENST00000496567 OR4X2Q8NGF9 303 aa17.04■□□□□ 0.32
C9orf3-222ENST00000496567 WIPF2Q8TF74 440 aaPredicted RBP17.04■□□□□ 0.32
C9orf3-222ENST00000496567 RBKSQ9H477 322 aa17.04■□□□□ 0.32
C9orf3-222ENST00000496567 H3BUA1 57 aa17.03■□□□□ 0.32
C9orf3-222ENST00000496567 SIX6O95475 246 aa17.03■□□□□ 0.32
C9orf3-222ENST00000496567 IGLV1-40P01703 118 aa17.03■□□□□ 0.32
C9orf3-222ENST00000496567 ELANEP08246 267 aa17.03■□□□□ 0.32
C9orf3-222ENST00000496567 CTRB1P17538 263 aa17.03■□□□□ 0.32
C9orf3-222ENST00000496567 CD300CQ08708 224 aa17.03■□□□□ 0.32
C9orf3-222ENST00000496567 CTRB2Q6GPI1 263 aa17.03■□□□□ 0.32
C9orf3-222ENST00000496567 AKAP14Q86UN6 197 aa17.03■□□□□ 0.32
C9orf3-222ENST00000496567 OR2C3Q8N628 320 aa17.03■□□□□ 0.32
C9orf3-222ENST00000496567 DTD1Q8TEA8 209 aa17.03■□□□□ 0.32
C9orf3-222ENST00000496567 HIPK2Q9H2X6 1198 aa17.03■□□□□ 0.32
C9orf3-222ENST00000496567 HEYLQ9NQ87 328 aaPredicted RBP17.03■□□□□ 0.32
C9orf3-222ENST00000496567 FBN1P35555 2871 aaKnown RBP17.03■□□□□ 0.32
C9orf3-222ENST00000496567 WRBO00258 174 aa17.02■□□□□ 0.32
C9orf3-222ENST00000496567 SYNGR2O43760 224 aa17.02■□□□□ 0.32
C9orf3-222ENST00000496567 SOX15O60248 233 aa17.02■□□□□ 0.32
C9orf3-222ENST00000496567 FBXO24O75426 580 aa17.02■□□□□ 0.32
C9orf3-222ENST00000496567 REG1AP05451 166 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms