RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 AKAIN1P0CW23 69 aa13.43□□□□□ -0.26
RHBDD3-207ENST00000496342 WT1-ASQ06250 92 aa13.43□□□□□ -0.26
RHBDD3-207ENST00000496342 ZNF486Q96H40 463 aaPredicted RBP13.43□□□□□ -0.26
RHBDD3-207ENST00000496342 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.42□□□□□ -0.26
RHBDD3-207ENST00000496342 DISC1C4P0D8 188 aa13.42□□□□□ -0.26
RHBDD3-207ENST00000496342 H0Y980 276 aa13.42□□□□□ -0.26
RHBDD3-207ENST00000496342 IGKV1-5P01602 117 aa13.42□□□□□ -0.26
RHBDD3-207ENST00000496342 TRAPPC2P0DI81 140 aa13.42□□□□□ -0.26
RHBDD3-207ENST00000496342 TRAPPC2BP0DI82 140 aa13.42□□□□□ -0.26
RHBDD3-207ENST00000496342 DEFA4P12838 97 aa13.42□□□□□ -0.26
RHBDD3-207ENST00000496342 EDN2P20800 178 aa13.42□□□□□ -0.26
RHBDD3-207ENST00000496342 KLF5Q13887 457 aaPredicted RBP13.42□□□□□ -0.26
RHBDD3-207ENST00000496342 MEF2DQ14814 521 aa13.42□□□□□ -0.26
RHBDD3-207ENST00000496342 ZNF79Q15937 498 aa13.42□□□□□ -0.26
RHBDD3-207ENST00000496342 RPEL1Q2QD12 228 aa13.42□□□□□ -0.26
RHBDD3-207ENST00000496342 OR51S1Q8NGJ8 323 aa13.42□□□□□ -0.26
RHBDD3-207ENST00000496342 OR1L8Q8NGR8 309 aa13.42□□□□□ -0.26
RHBDD3-207ENST00000496342 COPZ2Q9P299 210 aa13.42□□□□□ -0.26
RHBDD3-207ENST00000496342 ZNF256Q9Y2P7 627 aaPredicted RBP13.42□□□□□ -0.26
RHBDD3-207ENST00000496342 C3orf85A0A1B0GTC6 90 aa13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 C15orf61A6NNL5 157 aa13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 SNAPC5O75971 98 aa13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 SERPINE2P07093 398 aa13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 CTSDP07339 412 aaPredicted RBP13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 OR13C7P0DN81 318 aa13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 SPNP16150 400 aa13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 PTBP1P26599 531 aaKnown RBP eCLIP13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 MFAP2P55001 183 aa13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 PYDC2Q56P42 97 aa13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 SPINK9Q5DT21 86 aa13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 CLEC19AQ6UXS0 136 aa13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 IL34Q6ZMJ4 242 aa13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 H2BFWTQ7Z2G1 175 aa13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 ZNF429Q86V71 674 aa13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 TRIM63Q969Q1 353 aa13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 RTBDNQ9BSG5 229 aaPredicted RBP13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 C5orf66Q9H5L9 145 aa13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 ZC4H2Q9NQZ6 224 aa13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 NDUFA4L2Q9NRX3 87 aa13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 FAM212BQ9NTI7 297 aaPredicted RBP13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 RABL2AQ9UBK7 228 aaPredicted RBP13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 RABL2BQ9UNT1 228 aa13.41□□□□□ -0.26
RHBDD3-207ENST00000496342 IGHV3-21A0A0B4J1V1 117 aa13.4□□□□□ -0.26
RHBDD3-207ENST00000496342 A0A0G2JRQ6 117 aa13.4□□□□□ -0.26
RHBDD3-207ENST00000496342 INSL3P51460 131 aa13.4□□□□□ -0.26
RHBDD3-207ENST00000496342 CCDC71LQ8N9Z2 235 aa13.4□□□□□ -0.26
RHBDD3-207ENST00000496342 OR9G4Q8NGQ1 327 aa13.4□□□□□ -0.26
RHBDD3-207ENST00000496342 ZFAND1Q8TCF1 268 aa13.4□□□□□ -0.26
RHBDD3-207ENST00000496342 OR4C12Q96R67 309 aa13.4□□□□□ -0.26
RHBDD3-207ENST00000496342 THAP7Q9BT49 309 aaPredicted RBP13.4□□□□□ -0.26
RHBDD3-207ENST00000496342 TMEM14BQ9NUH8 114 aa13.4□□□□□ -0.26
RHBDD3-207ENST00000496342 PRNDQ9UKY0 176 aa13.4□□□□□ -0.26
RHBDD3-207ENST00000496342 FGF2P09038 288 aa13.39□□□□□ -0.27
RHBDD3-207ENST00000496342 OR5AC1P0C628 307 aa13.39□□□□□ -0.27
RHBDD3-207ENST00000496342 MECP2P51608 486 aaKnown RBP13.39□□□□□ -0.27
RHBDD3-207ENST00000496342 KLK9Q2XQG4 91 aa13.39□□□□□ -0.27
RHBDD3-207ENST00000496342 TRIM16LQ309B1 348 aa13.39□□□□□ -0.27
RHBDD3-207ENST00000496342 CCDC190Q86UF4 302 aa13.39□□□□□ -0.27
RHBDD3-207ENST00000496342 GDPD1Q8N9F7 314 aa13.39□□□□□ -0.27
RHBDD3-207ENST00000496342 LHFPL5Q8TAF8 219 aa13.39□□□□□ -0.27
RHBDD3-207ENST00000496342 LSM10Q969L4 123 aaKnown RBP13.39□□□□□ -0.27
RHBDD3-207ENST00000496342 MCUBQ9NWR8 336 aa13.39□□□□□ -0.27
RHBDD3-207ENST00000496342 PRR13Q9NZ81 148 aa13.39□□□□□ -0.27
RHBDD3-207ENST00000496342 KLK9Q9UKQ9 250 aa13.39□□□□□ -0.27
RHBDD3-207ENST00000496342 C14orf166Q9Y224 244 aaKnown RBP13.39□□□□□ -0.27
RHBDD3-207ENST00000496342 SELENOKQ9Y6D0 94 aa13.39□□□□□ -0.27
RHBDD3-207ENST00000496342 ZNF701M0R085 212 aaPredicted RBP13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 OR2C1O95371 312 aa13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 DHFRP00374 187 aa13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 CSN3P07498 182 aa13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 P0C879 139 aa13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 HIST1H1BP16401 226 aaKnown RBP13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 S100A5P33763 92 aa13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 ARL3P36405 182 aa13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 AKR1C2P52895 323 aa13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 KLF9Q13886 244 aaPredicted RBP13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 OR4A16Q8NH70 328 aa13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 TMEM230Q96A57 120 aa13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 EEF1AKMT3Q96AZ1 226 aa13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 TSC22D3Q99576 134 aa13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 SRSF8Q9BRL6 282 aaKnown RBP13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 ELOVL1Q9BW60 279 aa13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 NAA60Q9H7X0 242 aa13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 GPR132Q9UNW8 380 aa13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 LSM4Q9Y4Z0 139 aaKnown RBP13.38□□□□□ -0.27
RHBDD3-207ENST00000496342 IGLV1-51P01701 117 aa13.37□□□□□ -0.27
RHBDD3-207ENST00000496342 UCP1P25874 307 aa13.37□□□□□ -0.27
RHBDD3-207ENST00000496342 THOC7Q6I9Y2 204 aaKnown RBP13.37□□□□□ -0.27
RHBDD3-207ENST00000496342 SLC25A24Q6NUK1 477 aa13.37□□□□□ -0.27
RHBDD3-207ENST00000496342 ADAMTSL5Q6ZMM2 481 aa13.37□□□□□ -0.27
RHBDD3-207ENST00000496342 CADM3Q8N126 398 aa13.37□□□□□ -0.27
RHBDD3-207ENST00000496342 Q8N402 240 aa13.37□□□□□ -0.27
RHBDD3-207ENST00000496342 OR6Q1Q8NGQ2 317 aa13.37□□□□□ -0.27
RHBDD3-207ENST00000496342 OR5B3Q8NH48 314 aa13.37□□□□□ -0.27
RHBDD3-207ENST00000496342 PRRT1Q99946 306 aa13.37□□□□□ -0.27
RHBDD3-207ENST00000496342 F11RQ9Y624 299 aaKnown RBP13.37□□□□□ -0.27
RHBDD3-207ENST00000496342 IGHV3-35A0A0C4DH35 117 aa13.36□□□□□ -0.27
RHBDD3-207ENST00000496342 TEX13DA0A0J9YY54 714 aaPredicted RBP13.36□□□□□ -0.27
RHBDD3-207ENST00000496342 GP9P14770 177 aa13.36□□□□□ -0.27
RHBDD3-207ENST00000496342 GPR183P32249 361 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms