RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 MARCH1Q8TCQ1 289 aa11.22□□□□□ -0.61
ATG4B-224ENST00000494132 SEC22AQ96IW7 307 aa11.22□□□□□ -0.61
ATG4B-224ENST00000494132 CCDC140Q96MF4 163 aa11.22□□□□□ -0.61
ATG4B-224ENST00000494132 ZC4H2Q9NQZ6 224 aa11.22□□□□□ -0.61
ATG4B-224ENST00000494132 OR51B2Q9Y5P1 312 aa11.22□□□□□ -0.61
ATG4B-224ENST00000494132 IGHV3-21A0A0B4J1V1 117 aa11.21□□□□□ -0.61
ATG4B-224ENST00000494132 SNAPC5O75971 98 aa11.21□□□□□ -0.61
ATG4B-224ENST00000494132 DHFRP00374 187 aa11.21□□□□□ -0.61
ATG4B-224ENST00000494132 TRAPPC2P0DI81 140 aa11.21□□□□□ -0.61
ATG4B-224ENST00000494132 TRAPPC2BP0DI82 140 aa11.21□□□□□ -0.61
ATG4B-224ENST00000494132 GP9P14770 177 aa11.21□□□□□ -0.61
ATG4B-224ENST00000494132 TBPP20226 339 aa11.21□□□□□ -0.61
ATG4B-224ENST00000494132 TNFSF8P32971 234 aa11.21□□□□□ -0.61
ATG4B-224ENST00000494132 SP6Q3SY56 376 aa11.21□□□□□ -0.61
ATG4B-224ENST00000494132 IL34Q6ZMJ4 242 aa11.21□□□□□ -0.61
ATG4B-224ENST00000494132 OR4C16Q8NGL9 310 aa11.21□□□□□ -0.61
ATG4B-224ENST00000494132 OR1L8Q8NGR8 309 aa11.21□□□□□ -0.61
ATG4B-224ENST00000494132 TP53RKQ96S44 253 aa11.21□□□□□ -0.61
ATG4B-224ENST00000494132 SELENOKQ9Y6D0 94 aa11.21□□□□□ -0.61
ATG4B-224ENST00000494132 C15orf61A6NNL5 157 aa11.2□□□□□ -0.62
ATG4B-224ENST00000494132 CTDSPLO15194 276 aa11.2□□□□□ -0.62
ATG4B-224ENST00000494132 OR2C1O95371 312 aa11.2□□□□□ -0.62
ATG4B-224ENST00000494132 IGLV1-51P01701 117 aa11.2□□□□□ -0.62
ATG4B-224ENST00000494132 MECP2P51608 486 aaKnown RBP11.2□□□□□ -0.62
ATG4B-224ENST00000494132 SPINK9Q5DT21 86 aa11.2□□□□□ -0.62
ATG4B-224ENST00000494132 H2BFWTQ7Z2G1 175 aa11.2□□□□□ -0.62
ATG4B-224ENST00000494132 TERB2Q8NHR7 220 aa11.2□□□□□ -0.62
ATG4B-224ENST00000494132 EEF1AKMT3Q96AZ1 226 aa11.2□□□□□ -0.62
ATG4B-224ENST00000494132 ZNF486Q96H40 463 aaPredicted RBP11.2□□□□□ -0.62
ATG4B-224ENST00000494132 ASCL2Q99929 193 aa11.2□□□□□ -0.62
ATG4B-224ENST00000494132 B9D2Q9BPU9 175 aa11.2□□□□□ -0.62
ATG4B-224ENST00000494132 NXF2Q9GZY0 626 aaKnown RBP11.2□□□□□ -0.62
ATG4B-224ENST00000494132 NDUFA4L2Q9NRX3 87 aa11.2□□□□□ -0.62
ATG4B-224ENST00000494132 COPZ2Q9P299 210 aa11.2□□□□□ -0.62
ATG4B-224ENST00000494132 C3orf85A0A1B0GTC6 90 aa11.19□□□□□ -0.62
ATG4B-224ENST00000494132 FABP12A6NFH5 140 aa11.19□□□□□ -0.62
ATG4B-224ENST00000494132 H0Y980 276 aa11.19□□□□□ -0.62
ATG4B-224ENST00000494132 SERPINE2P07093 398 aa11.19□□□□□ -0.62
ATG4B-224ENST00000494132 CSN3P07498 182 aa11.19□□□□□ -0.62
ATG4B-224ENST00000494132 AKAIN1P0CW23 69 aa11.19□□□□□ -0.62
ATG4B-224ENST00000494132 HIST1H1BP16401 226 aaKnown RBP11.19□□□□□ -0.62
ATG4B-224ENST00000494132 ARL3P36405 182 aa11.19□□□□□ -0.62
ATG4B-224ENST00000494132 MFAP2P55001 183 aa11.19□□□□□ -0.62
ATG4B-224ENST00000494132 RND3P61587 244 aa11.19□□□□□ -0.62
ATG4B-224ENST00000494132 SSBP1Q04837 148 aaKnown RBP11.19□□□□□ -0.62
ATG4B-224ENST00000494132 TATDN3Q17R31 274 aa11.19□□□□□ -0.62
ATG4B-224ENST00000494132 SLC25A24Q6NUK1 477 aa11.19□□□□□ -0.62
ATG4B-224ENST00000494132 GDPD1Q8N9F7 314 aa11.19□□□□□ -0.62
ATG4B-224ENST00000494132 OR4A16Q8NH70 328 aa11.19□□□□□ -0.62
ATG4B-224ENST00000494132 LSM10Q969L4 123 aaKnown RBP11.19□□□□□ -0.62
ATG4B-224ENST00000494132 RBM38Q9H0Z9 239 aaKnown RBP11.19□□□□□ -0.62
ATG4B-224ENST00000494132 PRNDQ9UKY0 176 aa11.19□□□□□ -0.62
ATG4B-224ENST00000494132 IGHV3-35A0A0C4DH35 117 aa11.18□□□□□ -0.62
ATG4B-224ENST00000494132 IZUMO1RA6ND01 250 aa11.18□□□□□ -0.62
ATG4B-224ENST00000494132 DISC1C4P0D8 188 aa11.18□□□□□ -0.62
ATG4B-224ENST00000494132 GGCTO75223 188 aaKnown RBP11.18□□□□□ -0.62
ATG4B-224ENST00000494132 IGKV1-5P01602 117 aa11.18□□□□□ -0.62
ATG4B-224ENST00000494132 PTBP1P26599 531 aaKnown RBP eCLIP11.18□□□□□ -0.62
ATG4B-224ENST00000494132 GPR183P32249 361 aa11.18□□□□□ -0.62
ATG4B-224ENST00000494132 AKR1C2P52895 323 aa11.18□□□□□ -0.62
ATG4B-224ENST00000494132 DCTN2Q13561 401 aaKnown RBP11.18□□□□□ -0.62
ATG4B-224ENST00000494132 MEF2DQ14814 521 aa11.18□□□□□ -0.62
ATG4B-224ENST00000494132 TRIM16LQ309B1 348 aa11.18□□□□□ -0.62
ATG4B-224ENST00000494132 CCDC71LQ8N9Z2 235 aa11.18□□□□□ -0.62
ATG4B-224ENST00000494132 OR51S1Q8NGJ8 323 aa11.18□□□□□ -0.62
ATG4B-224ENST00000494132 ZFAND1Q8TCF1 268 aa11.18□□□□□ -0.62
ATG4B-224ENST00000494132 TSC22D3Q99576 134 aa11.18□□□□□ -0.62
ATG4B-224ENST00000494132 FAM212BQ9NTI7 297 aaPredicted RBP11.18□□□□□ -0.62
ATG4B-224ENST00000494132 TMEM14BQ9NUH8 114 aa11.18□□□□□ -0.62
ATG4B-224ENST00000494132 RSL24D1Q9UHA3 163 aaKnown RBP11.18□□□□□ -0.62
ATG4B-224ENST00000494132 ANKRD20A5PA0PJZ0 165 aa11.17□□□□□ -0.62
ATG4B-224ENST00000494132 CTSDP07339 412 aaPredicted RBP11.17□□□□□ -0.62
ATG4B-224ENST00000494132 FGF2P09038 288 aa11.17□□□□□ -0.62
ATG4B-224ENST00000494132 KLK9Q2XQG4 91 aa11.17□□□□□ -0.62
ATG4B-224ENST00000494132 THOC7Q6I9Y2 204 aaKnown RBP11.17□□□□□ -0.62
ATG4B-224ENST00000494132 ADAMTSL5Q6ZMM2 481 aa11.17□□□□□ -0.62
ATG4B-224ENST00000494132 CACNG8Q8WXS5 425 aa11.17□□□□□ -0.62
ATG4B-224ENST00000494132 SOSTQ9BQB4 213 aa11.17□□□□□ -0.62
ATG4B-224ENST00000494132 SRSF8Q9BRL6 282 aaKnown RBP11.17□□□□□ -0.62
ATG4B-224ENST00000494132 RTBDNQ9BSG5 229 aaPredicted RBP11.17□□□□□ -0.62
ATG4B-224ENST00000494132 C5orf66Q9H5L9 145 aa11.17□□□□□ -0.62
ATG4B-224ENST00000494132 MCUBQ9NWR8 336 aa11.17□□□□□ -0.62
ATG4B-224ENST00000494132 PEMTQ9UBM1 199 aa11.17□□□□□ -0.62
ATG4B-224ENST00000494132 KLK9Q9UKQ9 250 aa11.17□□□□□ -0.62
ATG4B-224ENST00000494132 C14orf166Q9Y224 244 aaKnown RBP11.17□□□□□ -0.62
ATG4B-224ENST00000494132 F11RQ9Y624 299 aaKnown RBP11.17□□□□□ -0.62
ATG4B-224ENST00000494132 SMAD5-AS1Q9Y6J3 95 aa11.17□□□□□ -0.62
ATG4B-224ENST00000494132 A0A0G2JRQ6 117 aa11.16□□□□□ -0.62
ATG4B-224ENST00000494132 GSTZ1O43708 216 aaPredicted RBP11.16□□□□□ -0.62
ATG4B-224ENST00000494132 CLEC3BP05452 202 aa11.16□□□□□ -0.62
ATG4B-224ENST00000494132 OR5AC1P0C628 307 aa11.16□□□□□ -0.62
ATG4B-224ENST00000494132 OR5B3Q8NH48 314 aa11.16□□□□□ -0.62
ATG4B-224ENST00000494132 ZNF502Q8TBZ5 544 aa11.16□□□□□ -0.62
ATG4B-224ENST00000494132 CXorf58Q96LI9 332 aa11.16□□□□□ -0.62
ATG4B-224ENST00000494132 TMEM56Q96MV1 263 aa11.16□□□□□ -0.62
ATG4B-224ENST00000494132 FKBP11Q9NYL4 201 aa11.16□□□□□ -0.62
ATG4B-224ENST00000494132 RABL2AQ9UBK7 228 aaPredicted RBP11.16□□□□□ -0.62
ATG4B-224ENST00000494132 RABL2BQ9UNT1 228 aa11.16□□□□□ -0.62
ATG4B-224ENST00000494132 V9GYH0 126 aa11.16□□□□□ -0.62
ATG4B-224ENST00000494132 TRBV7-1A0A0A6YYK4 115 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms