RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 IRF2P14316 349 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 AREGP15514 252 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 MDKP21741 143 aaPredicted RBP4.9□□□□□ -1.63
CPSF7-213ENST00000494016 CA7P43166 264 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 NPBWR1P48145 328 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 KLRB1Q12918 225 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 PEA15Q15121 130 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 SPANXN5Q5MJ07 72 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 DHRS7BQ6IAN0 325 aaPredicted RBP4.9□□□□□ -1.63
CPSF7-213ENST00000494016 ADAM5Q6NVV9 412 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 LYPD2Q6UXB3 125 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 H2BFWTQ7Z2G1 175 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 CENPVQ7Z7K6 275 aaPredicted RBP4.9□□□□□ -1.63
CPSF7-213ENST00000494016 STX12Q86Y82 276 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.9□□□□□ -1.63
CPSF7-213ENST00000494016 ZNF383Q8NA42 475 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 ST6GALNAC3Q8NDV1 305 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 SLC24A4Q8NFF2 622 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 LINC01560Q8TB33 94 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 FAM213BQ8TBF2 198 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 CD300LFQ8TDQ1 290 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 GLMPQ8WWB7 406 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 LEAP2Q969E1 77 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 TMEM186Q96B77 213 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 R3HDM4Q96D70 268 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 RARRES2Q99969 163 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 SRSF8Q9BRL6 282 aaKnown RBP4.9□□□□□ -1.63
CPSF7-213ENST00000494016 QTRT1Q9BXR0 403 aaKnown RBP4.9□□□□□ -1.63
CPSF7-213ENST00000494016 PARD6GQ9BYG4 376 aaPredicted RBP4.9□□□□□ -1.63
CPSF7-213ENST00000494016 NKX6-2Q9C056 277 aaPredicted RBP4.9□□□□□ -1.63
CPSF7-213ENST00000494016 DIDO1Q9BTC0 2240 aaKnown RBP4.9□□□□□ -1.63
CPSF7-213ENST00000494016 HCFC1P51610 2035 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 TET2Q6N021 2002 aaPredicted RBP4.9□□□□□ -1.63
CPSF7-213ENST00000494016 ICE1Q9Y2F5 2266 aa4.9□□□□□ -1.63
CPSF7-213ENST00000494016 USF3Q68DE3 2245 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 SPTBN1Q01082 2364 aaKnown RBP4.89□□□□□ -1.63
CPSF7-213ENST00000494016 PPIAL4EA0A075B759 164 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 TRGV10A0A0A0MS01 117 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 TRAV3A0A0B4J244 114 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 TRAV1-1A0A0B4J248 108 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 TRAV38-1A0A0B4J264 116 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 SERTM2A0A1B0GWG4 89 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 RBFOX3A6NFN3 312 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 TEX22C9J3V5 150 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 PPIAL4DF5H284 164 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 F8WDY8 70 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 IFNA5P01569 189 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 LIPFP07098 398 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 IL6RP08887 468 aaPredicted RBP4.89□□□□□ -1.63
CPSF7-213ENST00000494016 STAG3L3P0CL85 134 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 CT45A6P0DMU7 189 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 CT45A5P0DMU8 189 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 CT45A7P0DMV0 189 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 PPIAL4FP0DN26 164 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 EGR2P11161 476 aaPredicted RBP4.89□□□□□ -1.63
CPSF7-213ENST00000494016 NFYBP25208 207 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 LOXP28300 417 aaPredicted RBP4.89□□□□□ -1.63
CPSF7-213ENST00000494016 VDAC2P45880 294 aaPredicted RBP4.89□□□□□ -1.63
CPSF7-213ENST00000494016 RAB7AP51149 207 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 GNB2P62879 340 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 MRPS11P82912 194 aaKnown RBP4.89□□□□□ -1.63
CPSF7-213ENST00000494016 ADORA2A-AS1P86434 159 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 MEF2CQ06413 473 aaPredicted RBP4.89□□□□□ -1.63
CPSF7-213ENST00000494016 ZNF616Q08AN1 781 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 ATP6V1FQ16864 119 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 FBXL19-AS1Q494R0 122 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 DPPA3Q6W0C5 159 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 SVBPQ8N300 66 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.89□□□□□ -1.63
CPSF7-213ENST00000494016 OR52E5Q8NH55 327 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 SCGB1C1Q8TD33 95 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 DTD1Q8TEA8 209 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 MBD3L1Q8WWY6 194 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 TAF15Q92804 592 aaKnown RBP eCLIP4.89□□□□□ -1.63
CPSF7-213ENST00000494016 RBMXL1Q96E39 390 aaKnown RBP4.89□□□□□ -1.63
CPSF7-213ENST00000494016 S1PR3Q99500 378 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 PSMG3Q9BT73 122 aaPredicted RBP4.89□□□□□ -1.63
CPSF7-213ENST00000494016 WDR61Q9GZS3 305 aaKnown RBP4.89□□□□□ -1.63
CPSF7-213ENST00000494016 EGLN1Q9GZT9 426 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 VSIRQ9H7M9 311 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 RPRMQ9NS64 109 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 RPUSD1Q9UJJ7 312 aaKnown RBP4.89□□□□□ -1.63
CPSF7-213ENST00000494016 LAMP3Q9UQV4 416 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 FBXO7Q9Y3I1 522 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 PPIAL4AQ9Y536 164 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 YLPM1P49750 1951 aaKnown RBP4.89□□□□□ -1.63
CPSF7-213ENST00000494016 C2CD3Q4AC94 2353 aa4.89□□□□□ -1.63
CPSF7-213ENST00000494016 NF1P21359 2839 aa4.88□□□□□ -1.63
CPSF7-213ENST00000494016 CSMD1Q96PZ7 3565 aa4.88□□□□□ -1.63
CPSF7-213ENST00000494016 SAA2-SAA4A0A096LPE2 208 aa4.88□□□□□ -1.63
CPSF7-213ENST00000494016 A0A1B0GV50 99 aa4.88□□□□□ -1.63
CPSF7-213ENST00000494016 hADV38S2A0JD32 116 aa4.88□□□□□ -1.63
CPSF7-213ENST00000494016 C15orf62A8K5M9 175 aa4.88□□□□□ -1.63
CPSF7-213ENST00000494016 CEBPZOSA8MTT3 80 aa4.88□□□□□ -1.63
CPSF7-213ENST00000494016 CCL21O00585 134 aa4.88□□□□□ -1.63
CPSF7-213ENST00000494016 SNAPINO95295 136 aa4.88□□□□□ -1.63
CPSF7-213ENST00000494016 SRP19P09132 144 aaKnown RBP4.88□□□□□ -1.63
CPSF7-213ENST00000494016 SAA2P0DJI9 122 aaPredicted RBP4.88□□□□□ -1.63
CPSF7-213ENST00000494016 NDUFB7P17568 137 aa4.88□□□□□ -1.63
CPSF7-213ENST00000494016 GNLYP22749 145 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms