RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 OR1L8Q8NGR8 309 aa8.04□□□□□ -1.12
TRAPPC12-222ENST00000493792 USMG5Q96IX5 58 aa8.04□□□□□ -1.12
TRAPPC12-222ENST00000493792 SCGB3A2Q96PL1 93 aa8.04□□□□□ -1.12
TRAPPC12-222ENST00000493792 TSC22D3Q99576 134 aa8.04□□□□□ -1.12
TRAPPC12-222ENST00000493792 QTRT1Q9BXR0 403 aaKnown RBP8.04□□□□□ -1.12
TRAPPC12-222ENST00000493792 AKIP1Q9NQ31 210 aa8.04□□□□□ -1.12
TRAPPC12-222ENST00000493792 FBXL7Q9UJT9 491 aa8.04□□□□□ -1.12
TRAPPC12-222ENST00000493792 PRNDQ9UKY0 176 aa8.04□□□□□ -1.12
TRAPPC12-222ENST00000493792 ZNF257Q9Y2Q1 563 aa8.04□□□□□ -1.12
TRAPPC12-222ENST00000493792 TNCP24821 2201 aa8.04□□□□□ -1.12
TRAPPC12-222ENST00000493792 DYNC2H1Q8NCM8 4307 aaKnown RBP8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 TEX50A0A1B0GTY4 177 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 LINC00854A0A1B0GVQ3 168 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 A0A1B0GW64 132 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 FAM223BA6NKX1 122 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 NPIPB5A8MRT5 1133 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 IGKV1-39P01597 117 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 IGKV1D-39P04432 117 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 OR13C7P0DN81 318 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 PTBP1P26599 531 aaKnown RBP eCLIP8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 ZNF45Q02386 682 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 FHL3Q13643 280 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 SURF2Q15527 256 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 IZUMO4Q1ZYL8 232 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 C9orf66Q5T8R8 295 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 TRIQKQ629K1 86 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 FAM223AQ8IWN6 122 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 NECAP1Q8NC96 275 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 OR10W1Q8NGF6 305 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 DLX4Q92988 240 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 TRIM63Q969Q1 353 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 RRNAD1Q96FB5 475 aaKnown RBP8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 SEC22AQ96IW7 307 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 WWC2-AS2Q96NR7 200 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 NAA60Q9H7X0 242 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 RANGRFQ9HD47 186 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 FAM212BQ9NTI7 297 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 FKBP11Q9NYL4 201 aa8.03□□□□□ -1.12
TRAPPC12-222ENST00000493792 CGB1A6NKQ9 187 aa8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 CYB5BO43169 146 aa8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 IGHV3-23P01764 117 aa8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 OR5AC1P0C628 307 aa8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 HIST1H1BP16401 226 aaKnown RBP8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 AKR1C4P17516 323 aa8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 ZP3P21754 424 aa8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 ETV6P41212 452 aa8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 KLF9Q13886 244 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 C15orf32Q32M92 178 aa8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 THOC7Q6I9Y2 204 aaKnown RBP8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 TMED4Q7Z7H5 227 aa8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 SGPP2Q8IWX5 399 aa8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 LSM10Q969L4 123 aaKnown RBP8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 TMEM56Q96MV1 263 aa8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 RTBDNQ9BSG5 229 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 SRRQ9GZT4 340 aa8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 C5orf66Q9H5L9 145 aa8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 SLC2A8Q9NY64 477 aa8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 PEF1Q9UBV8 284 aaKnown RBP8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 GPR132Q9UNW8 380 aa8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 KCNIP3Q9Y2W7 256 aa8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 S4R3C0 116 aa8.02□□□□□ -1.13
TRAPPC12-222ENST00000493792 TRBV9A0A0B4J1U6 114 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 IGLC7A0M8Q6 106 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 DBX1A6NMT0 343 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 C15orf61A6NNL5 157 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 SAP30O75446 220 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 B3GALNT1O75752 331 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 NDUFB8O95169 186 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 BRI3O95415 125 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 TRBV12-3P01733 135 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 FGF2P09038 288 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 CTRB1P17538 263 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 RPEL1Q2QD12 228 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 SPINK9Q5DT21 86 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 CTRB2Q6GPI1 263 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 SLC25A24Q6NUK1 477 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 ZNF343Q6P1L6 599 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 GDPD1Q8N9F7 314 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 OR5B3Q8NH48 314 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 EEF1AKMT3Q96AZ1 226 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 SRSF8Q9BRL6 282 aaKnown RBP8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 PDCD10Q9BUL8 212 aa8.01□□□□□ -1.13
TRAPPC12-222ENST00000493792 TENM2Q9NT68 2774 aa8□□□□□ -1.13
TRAPPC12-222ENST00000493792 CRYM-AS1A6NIL9 109 aa8□□□□□ -1.13
TRAPPC12-222ENST00000493792 LY86O95711 162 aa8□□□□□ -1.13
TRAPPC12-222ENST00000493792 IFNA17P01571 189 aa8□□□□□ -1.13
TRAPPC12-222ENST00000493792 IGKV1-5P01602 117 aa8□□□□□ -1.13
TRAPPC12-222ENST00000493792 CRYGCP07315 174 aa8□□□□□ -1.13
TRAPPC12-222ENST00000493792 VAMP1P23763 118 aa8□□□□□ -1.13
TRAPPC12-222ENST00000493792 UCP1P25874 307 aa8□□□□□ -1.13
TRAPPC12-222ENST00000493792 SYNJ2BPP57105 145 aa8□□□□□ -1.13
TRAPPC12-222ENST00000493792 KRTAP10-11P60412 298 aa8□□□□□ -1.13
TRAPPC12-222ENST00000493792 DHODHQ02127 395 aa8□□□□□ -1.13
TRAPPC12-222ENST00000493792 WT1-ASQ06250 92 aa8□□□□□ -1.13
TRAPPC12-222ENST00000493792 TATDN3Q17R31 274 aa8□□□□□ -1.13
TRAPPC12-222ENST00000493792 TMEM268Q5VZI3 342 aa8□□□□□ -1.13
TRAPPC12-222ENST00000493792 CLEC19AQ6UXS0 136 aa8□□□□□ -1.13
TRAPPC12-222ENST00000493792 HSD17B13Q7Z5P4 300 aaPredicted RBP8□□□□□ -1.13
TRAPPC12-222ENST00000493792 SLC35G3Q8N808 338 aa8□□□□□ -1.13
TRAPPC12-222ENST00000493792 FANCD2OSQ96PS1 177 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms