RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, human

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC3-223	ENST00000492275	TMEM14B	Q9NUH8	114 aa		19.93	■□□□□ 0.78
TTC3-223	ENST00000492275	PRND	Q9UKY0	176 aa		19.93	■□□□□ 0.78
TTC3-223	ENST00000492275	C15orf61	A6NNL5	157 aa		19.92	■□□□□ 0.78
TTC3-223	ENST00000492275	CDS2	O95674	445 aa		19.92	■□□□□ 0.78
TTC3-223	ENST00000492275	TRAPPC2	P0DI81	140 aa		19.92	■□□□□ 0.78
TTC3-223	ENST00000492275	TRAPPC2B	P0DI82	140 aa		19.92	■□□□□ 0.78
TTC3-223	ENST00000492275	RAB25	P57735	213 aa		19.92	■□□□□ 0.78
TTC3-223	ENST00000492275	RHOG	P84095	191 aa		19.92	■□□□□ 0.78
TTC3-223	ENST00000492275	LHFPL5	Q8TAF8	219 aa		19.92	■□□□□ 0.78
TTC3-223	ENST00000492275	RCC1L	Q96I51	464 aa	Known RBP	19.92	■□□□□ 0.78
TTC3-223	ENST00000492275	IGHV4OR15-8	A0A075B7B6	117 aa		19.91	■□□□□ 0.78
TTC3-223	ENST00000492275		A0A087WW49	117 aa		19.91	■□□□□ 0.78
TTC3-223	ENST00000492275	HSPB1	P04792	205 aa	Known RBP	19.91	■□□□□ 0.78
TTC3-223	ENST00000492275	IL7	P13232	177 aa		19.91	■□□□□ 0.78
TTC3-223	ENST00000492275	KLK9	Q2XQG4	91 aa		19.91	■□□□□ 0.78
TTC3-223	ENST00000492275	BEAN1	Q3B7T3	259 aa		19.91	■□□□□ 0.78
TTC3-223	ENST00000492275	LINC00299	Q6ZSB3	139 aa		19.91	■□□□□ 0.78
TTC3-223	ENST00000492275	DPF1	Q92782	380 aa		19.91	■□□□□ 0.78
TTC3-223	ENST00000492275	FANCD2OS	Q96PS1	177 aa		19.91	■□□□□ 0.78
TTC3-223	ENST00000492275	BATF3	Q9NR55	127 aa		19.91	■□□□□ 0.78
TTC3-223	ENST00000492275	FKBP11	Q9NYL4	201 aa		19.91	■□□□□ 0.78
TTC3-223	ENST00000492275	KLK9	Q9UKQ9	250 aa		19.91	■□□□□ 0.78
TTC3-223	ENST00000492275	OR8U8	P0C7N1	319 aa		19.9	■□□□□ 0.78
TTC3-223	ENST00000492275	INPP1	P49441	399 aa		19.9	■□□□□ 0.78
TTC3-223	ENST00000492275	DHODH	Q02127	395 aa		19.9	■□□□□ 0.78
TTC3-223	ENST00000492275	WT1-AS	Q06250	92 aa		19.9	■□□□□ 0.78
TTC3-223	ENST00000492275	KPRP	Q5T749	579 aa	Predicted RBP	19.9	■□□□□ 0.78
TTC3-223	ENST00000492275	ZNF343	Q6P1L6	599 aa		19.9	■□□□□ 0.78
TTC3-223	ENST00000492275	SGPP2	Q8IWX5	399 aa		19.9	■□□□□ 0.78
TTC3-223	ENST00000492275	OR4A16	Q8NH70	328 aa		19.9	■□□□□ 0.78
TTC3-223	ENST00000492275		A0A0B4J293	547 aa		19.89	■□□□□ 0.77
TTC3-223	ENST00000492275		A0A0G2JRQ6	117 aa		19.89	■□□□□ 0.77
TTC3-223	ENST00000492275	LINC00854	A0A1B0GVQ3	168 aa		19.89	■□□□□ 0.77
TTC3-223	ENST00000492275	FAM223B	A6NKX1	122 aa		19.89	■□□□□ 0.77
TTC3-223	ENST00000492275	LINC01619	G3V211	115 aa		19.89	■□□□□ 0.77
TTC3-223	ENST00000492275	OR2J3	O76001	311 aa		19.89	■□□□□ 0.77
TTC3-223	ENST00000492275	AKR1C4	P17516	323 aa		19.89	■□□□□ 0.77
TTC3-223	ENST00000492275	SUPT4H1	P63272	117 aa	Known RBP	19.89	■□□□□ 0.77
TTC3-223	ENST00000492275	THOC7	Q6I9Y2	204 aa	Known RBP	19.89	■□□□□ 0.77
TTC3-223	ENST00000492275	FAM223A	Q8IWN6	122 aa		19.89	■□□□□ 0.77
TTC3-223	ENST00000492275	SELENOH	Q8IZQ5	122 aa	Known RBP	19.89	■□□□□ 0.77
TTC3-223	ENST00000492275	NECAP1	Q8NC96	275 aa		19.89	■□□□□ 0.77
TTC3-223	ENST00000492275	OR5B3	Q8NH48	314 aa		19.89	■□□□□ 0.77
TTC3-223	ENST00000492275	GALNT14	Q96FL9	552 aa		19.89	■□□□□ 0.77
TTC3-223	ENST00000492275	SLC25A21	Q9BQT8	299 aa	Predicted RBP	19.89	■□□□□ 0.77
TTC3-223	ENST00000492275	HINT2	Q9BX68	163 aa		19.89	■□□□□ 0.77
TTC3-223	ENST00000492275	NOTCH1	P46531	2555 aa		19.88	■□□□□ 0.77
TTC3-223	ENST00000492275	ATG12	O94817	140 aa		19.88	■□□□□ 0.77
TTC3-223	ENST00000492275	AKR1C2	P52895	323 aa		19.88	■□□□□ 0.77
TTC3-223	ENST00000492275	SLURP1	P55000	103 aa		19.88	■□□□□ 0.77
TTC3-223	ENST00000492275	ATP5G2	Q06055	141 aa		19.88	■□□□□ 0.77
TTC3-223	ENST00000492275	TMEM187	Q14656	261 aa		19.88	■□□□□ 0.77
TTC3-223	ENST00000492275	PRR13	Q9NZ81	148 aa		19.88	■□□□□ 0.77
TTC3-223	ENST00000492275	KCNIP3	Q9Y2W7	256 aa		19.88	■□□□□ 0.77
TTC3-223	ENST00000492275	DMRT1	Q9Y5R6	373 aa		19.88	■□□□□ 0.77
TTC3-223	ENST00000492275	ANKRD34B	A5PLL1	514 aa		19.87	■□□□□ 0.77
TTC3-223	ENST00000492275	NAP1L6	A6NFF2	107 aa		19.87	■□□□□ 0.77
TTC3-223	ENST00000492275	NDUFB8	O95169	186 aa		19.87	■□□□□ 0.77
TTC3-223	ENST00000492275	DUS4L	O95620	317 aa	Known RBP	19.87	■□□□□ 0.77
TTC3-223	ENST00000492275	OR13C7	P0DN81	318 aa		19.87	■□□□□ 0.77
TTC3-223	ENST00000492275	CCR6	P51684	374 aa		19.87	■□□□□ 0.77
TTC3-223	ENST00000492275	DEFA6	Q01524	100 aa		19.87	■□□□□ 0.77
TTC3-223	ENST00000492275	DCUN1D4	Q92564	292 aa		19.87	■□□□□ 0.77
TTC3-223	ENST00000492275	LSM10	Q969L4	123 aa	Known RBP	19.87	■□□□□ 0.77
TTC3-223	ENST00000492275	TMEM56	Q96MV1	263 aa		19.87	■□□□□ 0.77
TTC3-223	ENST00000492275	PTTG2	Q9NZH5	202 aa		19.87	■□□□□ 0.77
TTC3-223	ENST00000492275	FBXL7	Q9UJT9	491 aa		19.87	■□□□□ 0.77
TTC3-223	ENST00000492275	TMEM56-RWDD3	S4R434	201 aa		19.87	■□□□□ 0.77
TTC3-223	ENST00000492275	IGLV11-55	A0A075B6I3	123 aa		19.86	■□□□□ 0.77
TTC3-223	ENST00000492275	DHFR	P00374	187 aa		19.86	■□□□□ 0.77
TTC3-223	ENST00000492275	TRBV12-3	P01733	135 aa		19.86	■□□□□ 0.77
TTC3-223	ENST00000492275	C15orf32	Q32M92	178 aa		19.86	■□□□□ 0.77
TTC3-223	ENST00000492275		Q6ZRM9	215 aa		19.86	■□□□□ 0.77
TTC3-223	ENST00000492275	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	19.86	■□□□□ 0.77
TTC3-223	ENST00000492275	TMED4	Q7Z7H5	227 aa		19.86	■□□□□ 0.77
TTC3-223	ENST00000492275	DLX4	Q92988	240 aa	Predicted RBP	19.86	■□□□□ 0.77
TTC3-223	ENST00000492275	RBPMS	Q93062	196 aa	Known RBP	19.86	■□□□□ 0.77
TTC3-223	ENST00000492275	RANGRF	Q9HD47	186 aa	Predicted RBP	19.86	■□□□□ 0.77
TTC3-223	ENST00000492275	DEFA4	P12838	97 aa		19.85	■□□□□ 0.77
TTC3-223	ENST00000492275	BTC	P35070	178 aa		19.85	■□□□□ 0.77
TTC3-223	ENST00000492275	HSPE1	P61604	102 aa	Known RBP	19.85	■□□□□ 0.77
TTC3-223	ENST00000492275	TMEM268	Q5VZI3	342 aa		19.85	■□□□□ 0.77
TTC3-223	ENST00000492275	ZNF429	Q86V71	674 aa		19.85	■□□□□ 0.77
TTC3-223	ENST00000492275	RRNAD1	Q96FB5	475 aa	Known RBP	19.85	■□□□□ 0.77
TTC3-223	ENST00000492275	MCRIP2	Q9BUT9	160 aa	Known RBP	19.85	■□□□□ 0.77
TTC3-223	ENST00000492275	PEF1	Q9UBV8	284 aa	Known RBP	19.85	■□□□□ 0.77
TTC3-223	ENST00000492275	PLA2G10	O15496	165 aa		19.84	■□□□□ 0.77
TTC3-223	ENST00000492275	HIST1H1B	P16401	226 aa	Known RBP	19.84	■□□□□ 0.77
TTC3-223	ENST00000492275	PRCD	Q00LT1	54 aa		19.84	■□□□□ 0.77
TTC3-223	ENST00000492275	EXOSC2	Q13868	293 aa	Known RBP	19.84	■□□□□ 0.77
TTC3-223	ENST00000492275	RBMS2	Q15434	407 aa	Known RBP	19.84	■□□□□ 0.77
TTC3-223	ENST00000492275	ST8SIA3	O43173	380 aa		19.83	■□□□□ 0.77
TTC3-223	ENST00000492275	MFAP2	P55001	183 aa		19.83	■□□□□ 0.77
TTC3-223	ENST00000492275	TMEM128	Q5BJH2	165 aa		19.83	■□□□□ 0.77
TTC3-223	ENST00000492275	S100Z	Q8WXG8	99 aa		19.83	■□□□□ 0.77
TTC3-223	ENST00000492275	IL22RA2	Q969J5	263 aa		19.83	■□□□□ 0.77
TTC3-223	ENST00000492275	GPR146	Q96CH1	333 aa		19.83	■□□□□ 0.77
TTC3-223	ENST00000492275	C7orf50	Q9BRJ6	194 aa	Known RBP	19.83	■□□□□ 0.77
TTC3-223	ENST00000492275	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	19.82	■□□□□ 0.76
TTC3-223	ENST00000492275	NDUFB6	O95139	128 aa		19.82	■□□□□ 0.76

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms