RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 ECI1P42126 302 aa13.62□□□□□ -0.23
LMNB1-206ENST00000492190 EGFEM1PQ0D2K5 195 aa13.62□□□□□ -0.23
LMNB1-206ENST00000492190 PDLIM3Q53GG5 364 aaPredicted RBP13.62□□□□□ -0.23
LMNB1-206ENST00000492190 SPANXN2Q5MJ10 180 aa13.62□□□□□ -0.23
LMNB1-206ENST00000492190 CCDC71LQ8N9Z2 235 aa13.62□□□□□ -0.23
LMNB1-206ENST00000492190 OR1L8Q8NGR8 309 aa13.62□□□□□ -0.23
LMNB1-206ENST00000492190 TMEM230Q96A57 120 aa13.62□□□□□ -0.23
LMNB1-206ENST00000492190 MCRIP2Q9BUT9 160 aaKnown RBP13.62□□□□□ -0.23
LMNB1-206ENST00000492190 NDUFA4L2Q9NRX3 87 aa13.62□□□□□ -0.23
LMNB1-206ENST00000492190 TMEM14BQ9NUH8 114 aa13.62□□□□□ -0.23
LMNB1-206ENST00000492190 MCUBQ9NWR8 336 aa13.62□□□□□ -0.23
LMNB1-206ENST00000492190 OR51B2Q9Y5P1 312 aa13.62□□□□□ -0.23
LMNB1-206ENST00000492190 FAM223BA6NKX1 122 aa13.61□□□□□ -0.23
LMNB1-206ENST00000492190 C15orf61A6NNL5 157 aa13.61□□□□□ -0.23
LMNB1-206ENST00000492190 NDUFB8O95169 186 aa13.61□□□□□ -0.23
LMNB1-206ENST00000492190 TRAPPC2P0DI81 140 aa13.61□□□□□ -0.23
LMNB1-206ENST00000492190 TRAPPC2BP0DI82 140 aa13.61□□□□□ -0.23
LMNB1-206ENST00000492190 UCP1P25874 307 aa13.61□□□□□ -0.23
LMNB1-206ENST00000492190 WT1-ASQ06250 92 aa13.61□□□□□ -0.23
LMNB1-206ENST00000492190 FAM223AQ8IWN6 122 aa13.61□□□□□ -0.23
LMNB1-206ENST00000492190 TOMM5Q8N4H5 51 aa13.61□□□□□ -0.23
LMNB1-206ENST00000492190 GDPD1Q8N9F7 314 aa13.61□□□□□ -0.23
LMNB1-206ENST00000492190 NECAP1Q8NC96 275 aa13.61□□□□□ -0.23
LMNB1-206ENST00000492190 LHFPL5Q8TAF8 219 aa13.61□□□□□ -0.23
LMNB1-206ENST00000492190 AURKAIP1Q9NWT8 199 aaPredicted RBP13.61□□□□□ -0.23
LMNB1-206ENST00000492190 C14orf166Q9Y224 244 aaKnown RBP13.61□□□□□ -0.23
LMNB1-206ENST00000492190 IGLV11-55A0A075B6I3 123 aa13.6□□□□□ -0.23
LMNB1-206ENST00000492190 A0A0G2JRQ6 117 aa13.6□□□□□ -0.23
LMNB1-206ENST00000492190 SEC14L6B5MCN3 397 aa13.6□□□□□ -0.23
LMNB1-206ENST00000492190 OVOL1O14753 267 aa13.6□□□□□ -0.23
LMNB1-206ENST00000492190 SNAPC5O75971 98 aa13.6□□□□□ -0.23
LMNB1-206ENST00000492190 OR5AC1P0C628 307 aa13.6□□□□□ -0.23
LMNB1-206ENST00000492190 ATP5G2Q06055 141 aa13.6□□□□□ -0.23
LMNB1-206ENST00000492190 EXOSC2Q13868 293 aaKnown RBP13.6□□□□□ -0.23
LMNB1-206ENST00000492190 BAK1Q16611 211 aa13.6□□□□□ -0.23
LMNB1-206ENST00000492190 H2BFWTQ7Z2G1 175 aa13.6□□□□□ -0.23
LMNB1-206ENST00000492190 GLYATL2Q8WU03 294 aa13.6□□□□□ -0.23
LMNB1-206ENST00000492190 SRSF8Q9BRL6 282 aaKnown RBP13.6□□□□□ -0.23
LMNB1-206ENST00000492190 TMEM222Q9H0R3 208 aa13.6□□□□□ -0.23
LMNB1-206ENST00000492190 NAA60Q9H7X0 242 aa13.6□□□□□ -0.23
LMNB1-206ENST00000492190 RANGRFQ9HD47 186 aaPredicted RBP13.6□□□□□ -0.23
LMNB1-206ENST00000492190 SCP2D1Q9UJQ7 156 aa13.6□□□□□ -0.23
LMNB1-206ENST00000492190 PRNDQ9UKY0 176 aa13.6□□□□□ -0.23
LMNB1-206ENST00000492190 A6NHS1 94 aa13.59□□□□□ -0.23
LMNB1-206ENST00000492190 CRYM-AS1A6NIL9 109 aa13.59□□□□□ -0.23
LMNB1-206ENST00000492190 C15orf32Q32M92 178 aa13.59□□□□□ -0.23
LMNB1-206ENST00000492190 TSC22D3Q99576 134 aa13.59□□□□□ -0.23
LMNB1-206ENST00000492190 HINT2Q9BX68 163 aa13.59□□□□□ -0.23
LMNB1-206ENST00000492190 PEF1Q9UBV8 284 aaKnown RBP13.59□□□□□ -0.23
LMNB1-206ENST00000492190 FBXL7Q9UJT9 491 aa13.59□□□□□ -0.23
LMNB1-206ENST00000492190 S4R3C0 116 aa13.59□□□□□ -0.23
LMNB1-206ENST00000492190 DNAH9Q9NYC9 4486 aa13.58□□□□□ -0.23
LMNB1-206ENST00000492190 A0A0B4J293 547 aa13.58□□□□□ -0.24
LMNB1-206ENST00000492190 TEX13DA0A0J9YY54 714 aaPredicted RBP13.58□□□□□ -0.24
LMNB1-206ENST00000492190 BMPR1BO00238 502 aa13.58□□□□□ -0.24
LMNB1-206ENST00000492190 CDS2O95674 445 aa13.58□□□□□ -0.24
LMNB1-206ENST00000492190 OR13C7P0DN81 318 aa13.58□□□□□ -0.24
LMNB1-206ENST00000492190 MFAP2P55001 183 aa13.58□□□□□ -0.24
LMNB1-206ENST00000492190 AP3S2P59780 193 aa13.58□□□□□ -0.24
LMNB1-206ENST00000492190 TRIM16LQ309B1 348 aa13.58□□□□□ -0.24
LMNB1-206ENST00000492190 C9orf66Q5T8R8 295 aa13.58□□□□□ -0.24
LMNB1-206ENST00000492190 GPR61Q9BZJ8 451 aa13.58□□□□□ -0.24
LMNB1-206ENST00000492190 COL7A1Q02388 2944 aa13.58□□□□□ -0.24
LMNB1-206ENST00000492190 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.57□□□□□ -0.24
LMNB1-206ENST00000492190 WI2-2373I1.2A0A1W2PRP0 233 aa13.57□□□□□ -0.24
LMNB1-206ENST00000492190 IGHV3-23P01764 117 aa13.57□□□□□ -0.24
LMNB1-206ENST00000492190 FAUP35544 74 aaKnown RBP13.57□□□□□ -0.24
LMNB1-206ENST00000492190 SUPT4H1P63272 117 aaKnown RBP13.57□□□□□ -0.24
LMNB1-206ENST00000492190 KLF5Q13887 457 aaPredicted RBP13.57□□□□□ -0.24
LMNB1-206ENST00000492190 THOC7Q6I9Y2 204 aaKnown RBP13.57□□□□□ -0.24
LMNB1-206ENST00000492190 Q6ZRM9 215 aa13.57□□□□□ -0.24
LMNB1-206ENST00000492190 SELENOHQ8IZQ5 122 aaKnown RBP13.57□□□□□ -0.24
LMNB1-206ENST00000492190 OR5B3Q8NH48 314 aa13.57□□□□□ -0.24
LMNB1-206ENST00000492190 OR4A16Q8NH70 328 aa13.57□□□□□ -0.24
LMNB1-206ENST00000492190 LSM10Q969L4 123 aaKnown RBP13.57□□□□□ -0.24
LMNB1-206ENST00000492190 CCDC140Q96MF4 163 aa13.57□□□□□ -0.24
LMNB1-206ENST00000492190 FKBP11Q9NYL4 201 aa13.57□□□□□ -0.24
LMNB1-206ENST00000492190 PRR13Q9NZ81 148 aa13.57□□□□□ -0.24
LMNB1-206ENST00000492190 MFSD2BA6NFX1 497 aa13.56□□□□□ -0.24
LMNB1-206ENST00000492190 B3GALNT1O75752 331 aa13.56□□□□□ -0.24
LMNB1-206ENST00000492190 DHFRP00374 187 aa13.56□□□□□ -0.24
LMNB1-206ENST00000492190 DEFA4P12838 97 aa13.56□□□□□ -0.24
LMNB1-206ENST00000492190 ZP3P21754 424 aa13.56□□□□□ -0.24
LMNB1-206ENST00000492190 AKR1C2P52895 323 aa13.56□□□□□ -0.24
LMNB1-206ENST00000492190 TMEM187Q14656 261 aa13.56□□□□□ -0.24
LMNB1-206ENST00000492190 ZNF57Q68EA5 555 aaPredicted RBP13.56□□□□□ -0.24
LMNB1-206ENST00000492190 ACSM6Q6P461 480 aa13.56□□□□□ -0.24
LMNB1-206ENST00000492190 PPP5D1E7EU14 171 aa13.55□□□□□ -0.24
LMNB1-206ENST00000492190 K7EIL1 84 aa13.55□□□□□ -0.24
LMNB1-206ENST00000492190 HIST1H1BP16401 226 aaKnown RBP13.55□□□□□ -0.24
LMNB1-206ENST00000492190 HSPE1P61604 102 aaKnown RBP13.55□□□□□ -0.24
LMNB1-206ENST00000492190 SPINK9Q5DT21 86 aa13.55□□□□□ -0.24
LMNB1-206ENST00000492190 HSD17B13Q7Z5P4 300 aaPredicted RBP13.55□□□□□ -0.24
LMNB1-206ENST00000492190 ZNF429Q86V71 674 aa13.55□□□□□ -0.24
LMNB1-206ENST00000492190 DEDD2Q8WXF8 326 aa13.55□□□□□ -0.24
LMNB1-206ENST00000492190 GALNT14Q96FL9 552 aa13.55□□□□□ -0.24
LMNB1-206ENST00000492190 TMEM56Q96MV1 263 aa13.55□□□□□ -0.24
LMNB1-206ENST00000492190 SCGB3A2Q96PL1 93 aa13.55□□□□□ -0.24
LMNB1-206ENST00000492190 F11RQ9Y624 299 aaKnown RBP13.55□□□□□ -0.24
LMNB1-206ENST00000492190 TMEM56-RWDD3S4R434 201 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms