RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 PTBP1P26599 531 aaKnown RBP eCLIP12.61□□□□□ -0.39
PDLIM2-217ENST00000491330 LPAR6P43657 344 aa12.61□□□□□ -0.39
PDLIM2-217ENST00000491330 MECP2P51608 486 aaKnown RBP12.61□□□□□ -0.39
PDLIM2-217ENST00000491330 OR2B8PP59922 312 aa12.61□□□□□ -0.39
PDLIM2-217ENST00000491330 KLK9Q2XQG4 91 aa12.61□□□□□ -0.39
PDLIM2-217ENST00000491330 PLET1Q6UQ28 207 aa12.61□□□□□ -0.39
PDLIM2-217ENST00000491330 TMEM229BQ8NBD8 167 aa12.61□□□□□ -0.39
PDLIM2-217ENST00000491330 MARC2Q969Z3 335 aa12.61□□□□□ -0.39
PDLIM2-217ENST00000491330 ISOC1Q96CN7 298 aa12.61□□□□□ -0.39
PDLIM2-217ENST00000491330 GAR1Q9NY12 217 aaKnown RBP12.61□□□□□ -0.39
PDLIM2-217ENST00000491330 KLK9Q9UKQ9 250 aa12.61□□□□□ -0.39
PDLIM2-217ENST00000491330 PRNDQ9UKY0 176 aa12.61□□□□□ -0.39
PDLIM2-217ENST00000491330 SORL1Q92673 2214 aa12.61□□□□□ -0.39
PDLIM2-217ENST00000491330 S1PR2O95136 353 aa12.6□□□□□ -0.39
PDLIM2-217ENST00000491330 NDUFB8O95169 186 aa12.6□□□□□ -0.39
PDLIM2-217ENST00000491330 KRASP01116 189 aa12.6□□□□□ -0.39
PDLIM2-217ENST00000491330 CD74P04233 296 aa12.6□□□□□ -0.39
PDLIM2-217ENST00000491330 RPA2P15927 270 aa12.6□□□□□ -0.39
PDLIM2-217ENST00000491330 CD81P60033 236 aa12.6□□□□□ -0.39
PDLIM2-217ENST00000491330 RND3P61587 244 aa12.6□□□□□ -0.39
PDLIM2-217ENST00000491330 MEF2DQ14814 521 aa12.6□□□□□ -0.39
PDLIM2-217ENST00000491330 SLC25A24Q6NUK1 477 aa12.6□□□□□ -0.39
PDLIM2-217ENST00000491330 IL34Q6ZMJ4 242 aa12.6□□□□□ -0.39
PDLIM2-217ENST00000491330 Q8N1Y9 231 aa12.6□□□□□ -0.39
PDLIM2-217ENST00000491330 MUC7Q8TAX7 377 aa12.6□□□□□ -0.39
PDLIM2-217ENST00000491330 LSM10Q969L4 123 aaKnown RBP12.6□□□□□ -0.39
PDLIM2-217ENST00000491330 FXYD6Q9H0Q3 95 aa12.6□□□□□ -0.39
PDLIM2-217ENST00000491330 RSL24D1Q9UHA3 163 aaKnown RBP12.6□□□□□ -0.39
PDLIM2-217ENST00000491330 UFC1Q9Y3C8 167 aa12.6□□□□□ -0.39
PDLIM2-217ENST00000491330 PPP5D1E7EU14 171 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 H3BMQ9 156 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 RBMXL2O75526 392 aaKnown RBP12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 REG1AP05451 166 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 CLEC3BP05452 202 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 SERPINE2P07093 398 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 OR13C7P0DN81 318 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 LYL1P12980 280 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 FOLR2P14207 255 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 MYOD1P15172 320 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 CD300EQ496F6 205 aaPredicted RBP12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 ZNF57Q68EA5 555 aaPredicted RBP12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 LHFPL1Q86WI0 220 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 OR5B3Q8NH48 314 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 OR52I2Q8NH67 350 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 ZFAND1Q8TCF1 268 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 VN1R17PQ8TDU5 208 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 SMIM4Q8WVI0 70 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 DIRAS2Q96HU8 199 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 ABHD1Q96SE0 405 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 MIXL1Q9H2W2 232 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 C19orf73Q9NVV2 129 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 KLK11Q9UBX7 282 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 OR51B2Q9Y5P1 312 aa12.59□□□□□ -0.39
PDLIM2-217ENST00000491330 IGLV11-55A0A075B6I3 123 aa12.58□□□□□ -0.4
PDLIM2-217ENST00000491330 C2orf70A6NJV1 201 aa12.58□□□□□ -0.4
PDLIM2-217ENST00000491330 IGHV3-23P01764 117 aa12.58□□□□□ -0.4
PDLIM2-217ENST00000491330 CBLN1P23435 193 aa12.58□□□□□ -0.4
PDLIM2-217ENST00000491330 DEFB114Q30KQ6 69 aa12.58□□□□□ -0.4
PDLIM2-217ENST00000491330 RBPMS2Q6ZRY4 209 aaKnown RBP12.58□□□□□ -0.4
PDLIM2-217ENST00000491330 H2BFWTQ7Z2G1 175 aa12.58□□□□□ -0.4
PDLIM2-217ENST00000491330 GDPD1Q8N9F7 314 aa12.58□□□□□ -0.4
PDLIM2-217ENST00000491330 OR4A16Q8NH70 328 aa12.58□□□□□ -0.4
PDLIM2-217ENST00000491330 FANCD2OSQ96PS1 177 aa12.58□□□□□ -0.4
PDLIM2-217ENST00000491330 NEURL2Q9BR09 285 aa12.58□□□□□ -0.4
PDLIM2-217ENST00000491330 SLIRPQ9GZT3 109 aaKnown RBP12.58□□□□□ -0.4
PDLIM2-217ENST00000491330 NXF2Q9GZY0 626 aaKnown RBP12.58□□□□□ -0.4
PDLIM2-217ENST00000491330 TEX50A0A1B0GTY4 177 aa12.57□□□□□ -0.4
PDLIM2-217ENST00000491330 E7EUB6 86 aa12.57□□□□□ -0.4
PDLIM2-217ENST00000491330 CTDSP2O14595 271 aa12.57□□□□□ -0.4
PDLIM2-217ENST00000491330 HLA-AP01891 365 aaKnown RBP12.57□□□□□ -0.4
PDLIM2-217ENST00000491330 SURF2Q15527 256 aaPredicted RBP12.57□□□□□ -0.4
PDLIM2-217ENST00000491330 STEAP1BQ6NZ63 245 aa12.57□□□□□ -0.4
PDLIM2-217ENST00000491330 CCDC71LQ8N9Z2 235 aa12.57□□□□□ -0.4
PDLIM2-217ENST00000491330 TERB2Q8NHR7 220 aa12.57□□□□□ -0.4
PDLIM2-217ENST00000491330 IL17DQ8TAD2 202 aa12.57□□□□□ -0.4
PDLIM2-217ENST00000491330 DEDD2Q8WXF8 326 aa12.57□□□□□ -0.4
PDLIM2-217ENST00000491330 CITED4Q96RK1 184 aa12.57□□□□□ -0.4
PDLIM2-217ENST00000491330 ATP6V0BQ99437 205 aa12.57□□□□□ -0.4
PDLIM2-217ENST00000491330 TM2D3Q9BRN9 247 aa12.57□□□□□ -0.4
PDLIM2-217ENST00000491330 C6orf62Q9GZU0 229 aaPredicted RBP12.57□□□□□ -0.4
PDLIM2-217ENST00000491330 GSTZ1O43708 216 aaPredicted RBP12.56□□□□□ -0.4
PDLIM2-217ENST00000491330 RAB3DO95716 219 aa12.56□□□□□ -0.4
PDLIM2-217ENST00000491330 CD3DP04234 171 aa12.56□□□□□ -0.4
PDLIM2-217ENST00000491330 PGAM2P15259 253 aa12.56□□□□□ -0.4
PDLIM2-217ENST00000491330 GPR183P32249 361 aa12.56□□□□□ -0.4
PDLIM2-217ENST00000491330 G6PCP35575 357 aa12.56□□□□□ -0.4
PDLIM2-217ENST00000491330 ELLP55199 621 aaPredicted RBP12.56□□□□□ -0.4
PDLIM2-217ENST00000491330 IL18Q14116 193 aa12.56□□□□□ -0.4
PDLIM2-217ENST00000491330 PHLDA2Q53GA4 152 aa12.56□□□□□ -0.4
PDLIM2-217ENST00000491330 LAMTOR1Q6IAA8 161 aa12.56□□□□□ -0.4
PDLIM2-217ENST00000491330 SPSB3Q6PJ21 355 aa12.56□□□□□ -0.4
PDLIM2-217ENST00000491330 PDCD10Q9BUL8 212 aa12.56□□□□□ -0.4
PDLIM2-217ENST00000491330 MRPL27Q9P0M9 148 aaKnown RBP12.56□□□□□ -0.4
PDLIM2-217ENST00000491330 CEPT1Q9Y6K0 416 aa12.56□□□□□ -0.4
PDLIM2-217ENST00000491330 S4R3C0 116 aa12.56□□□□□ -0.4
PDLIM2-217ENST00000491330 DNAH3Q8TD57 4116 aa12.56□□□□□ -0.4
PDLIM2-217ENST00000491330 TRAV25A0A0B4J276 109 aa12.55□□□□□ -0.4
PDLIM2-217ENST00000491330 IGLC7A0M8Q6 106 aa12.55□□□□□ -0.4
PDLIM2-217ENST00000491330 DISC1C4P0D8 188 aa12.55□□□□□ -0.4
PDLIM2-217ENST00000491330 AKAIN1P0CW23 69 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms