RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 H3BUA1 57 aa11.15□□□□□ -0.62
SRGAP3-208ENST00000490348 LYRM1O43325 122 aa11.15□□□□□ -0.62
SRGAP3-208ENST00000490348 TRGV3P03979 118 aa11.15□□□□□ -0.62
SRGAP3-208ENST00000490348 REG1AP05451 166 aa11.15□□□□□ -0.62
SRGAP3-208ENST00000490348 DHODHQ02127 395 aa11.15□□□□□ -0.62
SRGAP3-208ENST00000490348 WT1-ASQ06250 92 aa11.15□□□□□ -0.62
SRGAP3-208ENST00000490348 ZNF846Q147U1 533 aa11.15□□□□□ -0.62
SRGAP3-208ENST00000490348 Q6ZRM9 215 aa11.15□□□□□ -0.62
SRGAP3-208ENST00000490348 RBPMSQ93062 196 aaKnown RBP11.15□□□□□ -0.62
SRGAP3-208ENST00000490348 SLA2Q9H6Q3 261 aa11.15□□□□□ -0.62
SRGAP3-208ENST00000490348 ZNF355PQ9NSJ1 428 aa11.15□□□□□ -0.62
SRGAP3-208ENST00000490348 PRNDQ9UKY0 176 aa11.15□□□□□ -0.62
SRGAP3-208ENST00000490348 TRBV9A0A0B4J1U6 114 aa11.14□□□□□ -0.63
SRGAP3-208ENST00000490348 CENPXA8MT69 81 aa11.14□□□□□ -0.63
SRGAP3-208ENST00000490348 SNAPC5O75971 98 aa11.14□□□□□ -0.63
SRGAP3-208ENST00000490348 CRYGCP07315 174 aa11.14□□□□□ -0.63
SRGAP3-208ENST00000490348 CTRB1P17538 263 aa11.14□□□□□ -0.63
SRGAP3-208ENST00000490348 PSMB6P28072 239 aa11.14□□□□□ -0.63
SRGAP3-208ENST00000490348 SLC6A1P30531 599 aa11.14□□□□□ -0.63
SRGAP3-208ENST00000490348 AKR1C2P52895 323 aa11.14□□□□□ -0.63
SRGAP3-208ENST00000490348 PPP1R1AQ13522 171 aa11.14□□□□□ -0.63
SRGAP3-208ENST00000490348 TMEM128Q5BJH2 165 aa11.14□□□□□ -0.63
SRGAP3-208ENST00000490348 TMEM268Q5VZI3 342 aa11.14□□□□□ -0.63
SRGAP3-208ENST00000490348 CTRB2Q6GPI1 263 aa11.14□□□□□ -0.63
SRGAP3-208ENST00000490348 SLC25A42Q86VD7 318 aa11.14□□□□□ -0.63
SRGAP3-208ENST00000490348 OR1L8Q8NGR8 309 aa11.14□□□□□ -0.63
SRGAP3-208ENST00000490348 P2RX4Q99571 388 aa11.14□□□□□ -0.63
SRGAP3-208ENST00000490348 DMRT1Q9Y5R6 373 aa11.14□□□□□ -0.63
SRGAP3-208ENST00000490348 UPK1BO75841 260 aa11.13□□□□□ -0.63
SRGAP3-208ENST00000490348 IGHV3-11P01762 117 aa11.13□□□□□ -0.63
SRGAP3-208ENST00000490348 RUNX1Q01196 453 aa11.13□□□□□ -0.63
SRGAP3-208ENST00000490348 CENPSQ8N2Z9 138 aa11.13□□□□□ -0.63
SRGAP3-208ENST00000490348 SLC35G3Q8N808 338 aa11.13□□□□□ -0.63
SRGAP3-208ENST00000490348 OR5B3Q8NH48 314 aa11.13□□□□□ -0.63
SRGAP3-208ENST00000490348 OR4A16Q8NH70 328 aa11.13□□□□□ -0.63
SRGAP3-208ENST00000490348 FANCD2OSQ96PS1 177 aa11.13□□□□□ -0.63
SRGAP3-208ENST00000490348 KCNIP3Q9Y2W7 256 aa11.13□□□□□ -0.63
SRGAP3-208ENST00000490348 CCL24O00175 119 aa11.12□□□□□ -0.63
SRGAP3-208ENST00000490348 TRAPPC2P0DI81 140 aa11.12□□□□□ -0.63
SRGAP3-208ENST00000490348 TRAPPC2BP0DI82 140 aa11.12□□□□□ -0.63
SRGAP3-208ENST00000490348 FHL3Q13643 280 aa11.12□□□□□ -0.63
SRGAP3-208ENST00000490348 KLK9Q2XQG4 91 aa11.12□□□□□ -0.63
SRGAP3-208ENST00000490348 ANKRD55Q3KP44 614 aa11.12□□□□□ -0.63
SRGAP3-208ENST00000490348 ZNF429Q86V71 674 aa11.12□□□□□ -0.63
SRGAP3-208ENST00000490348 MRPL41Q8IXM3 137 aaKnown RBP11.12□□□□□ -0.63
SRGAP3-208ENST00000490348 LINC00482Q8N8I6 264 aa11.12□□□□□ -0.63
SRGAP3-208ENST00000490348 IL22RA2Q969J5 263 aa11.12□□□□□ -0.63
SRGAP3-208ENST00000490348 SRSF8Q9BRL6 282 aaKnown RBP11.12□□□□□ -0.63
SRGAP3-208ENST00000490348 FKBP11Q9NYL4 201 aa11.12□□□□□ -0.63
SRGAP3-208ENST00000490348 KLK9Q9UKQ9 250 aa11.12□□□□□ -0.63
SRGAP3-208ENST00000490348 ZNF257Q9Y2Q1 563 aa11.12□□□□□ -0.63
SRGAP3-208ENST00000490348 ATG12O94817 140 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 LGALS1P09382 135 aaKnown RBP11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 ANXA7P20073 488 aaKnown RBP11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 VAMP1P23763 118 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 RHOGP84095 191 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 ASAH1Q13510 395 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 LYZL2Q7Z4W2 148 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 WFDC9Q8NEX5 89 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 GPR146Q96CH1 333 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 RRNAD1Q96FB5 475 aaKnown RBP11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 HINT2Q9BX68 163 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 ST8SIA3O43173 380 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 SFT2D2O95562 160 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 PF4P02776 101 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 OR13C7P0DN81 318 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 MYCNOSP40205 109 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 MFAP2P55001 183 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 HSPE1P61604 102 aaKnown RBP11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 PRCDQ00LT1 54 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 AARDQ4LEZ3 155 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 SPINK9Q5DT21 86 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 NMSQ5H8A3 153 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 FAM219AQ8IW50 185 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 OR11H1Q8NG94 326 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 LSM10Q969L4 123 aaKnown RBP11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 C20orf85Q9H1P6 137 aa11.11□□□□□ -0.63
SRGAP3-208ENST00000490348 IGLV11-55A0A075B6I3 123 aa11.1□□□□□ -0.63
SRGAP3-208ENST00000490348 A0A0B4J2A0 478 aa11.1□□□□□ -0.63
SRGAP3-208ENST00000490348 OR2J3O76001 311 aa11.1□□□□□ -0.63
SRGAP3-208ENST00000490348 TCRBP04435 133 aa11.1□□□□□ -0.63
SRGAP3-208ENST00000490348 ANXA3P12429 323 aa11.1□□□□□ -0.63
SRGAP3-208ENST00000490348 UBE2MP61081 183 aaKnown RBP11.1□□□□□ -0.63
SRGAP3-208ENST00000490348 THOC7Q6I9Y2 204 aaKnown RBP11.1□□□□□ -0.63
SRGAP3-208ENST00000490348 LRTM2Q8N967 370 aa11.1□□□□□ -0.63
SRGAP3-208ENST00000490348 RNASE11Q8TAA1 199 aaKnown RBP11.1□□□□□ -0.63
SRGAP3-208ENST00000490348 CACNG5Q9UF02 275 aa11.1□□□□□ -0.63
SRGAP3-208ENST00000490348 SHPKQ9UHJ6 478 aa11.1□□□□□ -0.63
SRGAP3-208ENST00000490348 IGHV4OR15-8A0A075B7B6 117 aa11.09□□□□□ -0.63
SRGAP3-208ENST00000490348 A0A087WW49 117 aa11.09□□□□□ -0.63
SRGAP3-208ENST00000490348 C13orf42A0A1B0GVH6 325 aa11.09□□□□□ -0.63
SRGAP3-208ENST00000490348 C9orf170A2RU37 121 aa11.09□□□□□ -0.63
SRGAP3-208ENST00000490348 FAM223BA6NKX1 122 aa11.09□□□□□ -0.63
SRGAP3-208ENST00000490348 NDUFB8O95169 186 aa11.09□□□□□ -0.63
SRGAP3-208ENST00000490348 TRBV12-3P01733 135 aa11.09□□□□□ -0.63
SRGAP3-208ENST00000490348 OR4E1P0C645 316 aa11.09□□□□□ -0.63
SRGAP3-208ENST00000490348 DHRS2Q13268 280 aa11.09□□□□□ -0.63
SRGAP3-208ENST00000490348 C15orf32Q32M92 178 aa11.09□□□□□ -0.63
SRGAP3-208ENST00000490348 ZNF343Q6P1L6 599 aa11.09□□□□□ -0.63
SRGAP3-208ENST00000490348 FAM223AQ8IWN6 122 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms