RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 AKR1C2P52895 323 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 TMEM128Q5BJH2 165 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 CTRB2Q6GPI1 263 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 LCNL1Q6ZST4 164 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 LINC00482Q8N8I6 264 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 NECAP1Q8NC96 275 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 OR5T1Q8NG75 326 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 LSM10Q969L4 123 aaKnown RBP8.6□□□□□ -1.03
CPSF7-212ENST00000489728 TMEM230Q96A57 120 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 RRNAD1Q96FB5 475 aaKnown RBP8.6□□□□□ -1.03
CPSF7-212ENST00000489728 RCC1LQ96I51 464 aaKnown RBP8.6□□□□□ -1.03
CPSF7-212ENST00000489728 RAX2Q96IS3 184 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 TMEM56Q96MV1 263 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 FYTTD1Q96QD9 318 aaKnown RBP8.6□□□□□ -1.03
CPSF7-212ENST00000489728 MCRIP2Q9BUT9 160 aaKnown RBP8.6□□□□□ -1.03
CPSF7-212ENST00000489728 NDUFA4L2Q9NRX3 87 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 ZNF355PQ9NSJ1 428 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 OR51B2Q9Y5P1 312 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 TMEM56-RWDD3S4R434 201 aa8.6□□□□□ -1.03
CPSF7-212ENST00000489728 TEX50A0A1B0GTY4 177 aa8.59□□□□□ -1.03
CPSF7-212ENST00000489728 E7EUB6 86 aa8.59□□□□□ -1.03
CPSF7-212ENST00000489728 NDUFB6O95139 128 aa8.59□□□□□ -1.03
CPSF7-212ENST00000489728 IGKV1-5P01602 117 aa8.59□□□□□ -1.03
CPSF7-212ENST00000489728 CD33P20138 364 aa8.59□□□□□ -1.03
CPSF7-212ENST00000489728 ZNF616Q08AN1 781 aa8.59□□□□□ -1.03
CPSF7-212ENST00000489728 SP6Q3SY56 376 aa8.59□□□□□ -1.03
CPSF7-212ENST00000489728 AARDQ4LEZ3 155 aa8.59□□□□□ -1.03
CPSF7-212ENST00000489728 C18orf65Q6ZTR6 163 aa8.59□□□□□ -1.03
CPSF7-212ENST00000489728 OR1L6Q8NGR2 347 aa8.59□□□□□ -1.03
CPSF7-212ENST00000489728 OR4A16Q8NH70 328 aa8.59□□□□□ -1.03
CPSF7-212ENST00000489728 GNB4Q9HAV0 340 aa8.59□□□□□ -1.03
CPSF7-212ENST00000489728 DUXBA0A1W2PPF3 345 aa8.58□□□□□ -1.04
CPSF7-212ENST00000489728 HMX3A6NHT5 357 aa8.58□□□□□ -1.04
CPSF7-212ENST00000489728 INS-IGF2F8WCM5 200 aa8.58□□□□□ -1.04
CPSF7-212ENST00000489728 AREGP15514 252 aa8.58□□□□□ -1.04
CPSF7-212ENST00000489728 AKR1C4P17516 323 aa8.58□□□□□ -1.04
CPSF7-212ENST00000489728 HSPE1P61604 102 aaKnown RBP8.58□□□□□ -1.04
CPSF7-212ENST00000489728 SUPT4H1P63272 117 aaKnown RBP8.58□□□□□ -1.04
CPSF7-212ENST00000489728 RHOGP84095 191 aa8.58□□□□□ -1.04
CPSF7-212ENST00000489728 PRCDQ00LT1 54 aa8.58□□□□□ -1.04
CPSF7-212ENST00000489728 TMEM187Q14656 261 aa8.58□□□□□ -1.04
CPSF7-212ENST00000489728 ZNF846Q147U1 533 aa8.58□□□□□ -1.04
CPSF7-212ENST00000489728 ZNF343Q6P1L6 599 aa8.58□□□□□ -1.04
CPSF7-212ENST00000489728 CENPSQ8N2Z9 138 aa8.58□□□□□ -1.04
CPSF7-212ENST00000489728 OR1N2Q8NGR9 330 aa8.58□□□□□ -1.04
CPSF7-212ENST00000489728 RNASE11Q8TAA1 199 aaKnown RBP8.58□□□□□ -1.04
CPSF7-212ENST00000489728 MS4A10Q96PG2 267 aa8.58□□□□□ -1.04
CPSF7-212ENST00000489728 THYN1Q9P016 225 aa8.58□□□□□ -1.04
CPSF7-212ENST00000489728 NBEAL1Q6ZS30 2694 aa8.58□□□□□ -1.04
CPSF7-212ENST00000489728 IGLV11-55A0A075B6I3 123 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 A0A0B4J2A0 478 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 LINC01619G3V211 115 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 LYRM1O43325 122 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 HSPB1P04792 205 aaKnown RBP8.57□□□□□ -1.04
CPSF7-212ENST00000489728 APELAP0DMC3 54 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 DEFA4P12838 97 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 MYOD1P15172 320 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 ZP3P21754 424 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 BTCP35070 178 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 PDLIM3Q53GG5 364 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-212ENST00000489728 KPRPQ5T749 579 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-212ENST00000489728 SAMD5Q5TGI4 173 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 TMEM268Q5VZI3 342 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 TMED4Q7Z7H5 227 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 SELENOHQ8IZQ5 122 aaKnown RBP8.57□□□□□ -1.04
CPSF7-212ENST00000489728 LGI3Q8N145 548 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 LRTM2Q8N967 370 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 ZNF114Q8NC26 417 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 OR11H1Q8NG94 326 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 LHFPL5Q8TAF8 219 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 CASTOR1Q8WTX7 329 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 DPF1Q92782 380 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 ATP6V0BQ99437 205 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 PDCD10Q9BUL8 212 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 RANGRFQ9HD47 186 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-212ENST00000489728 SHPKQ9UHJ6 478 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 NSG2Q9Y328 171 aa8.57□□□□□ -1.04
CPSF7-212ENST00000489728 A0A0B4J293 547 aa8.56□□□□□ -1.04
CPSF7-212ENST00000489728 WIPF1O43516 503 aa8.56□□□□□ -1.04
CPSF7-212ENST00000489728 RBMXL2O75526 392 aaKnown RBP8.56□□□□□ -1.04
CPSF7-212ENST00000489728 OR13C7P0DN81 318 aa8.56□□□□□ -1.04
CPSF7-212ENST00000489728 CCR6P51684 374 aa8.56□□□□□ -1.04
CPSF7-212ENST00000489728 ATP5G2Q06055 141 aa8.56□□□□□ -1.04
CPSF7-212ENST00000489728 WT1-ASQ06250 92 aa8.56□□□□□ -1.04
CPSF7-212ENST00000489728 DEFB136Q30KP8 78 aa8.56□□□□□ -1.04
CPSF7-212ENST00000489728 OR52E5Q8NH55 327 aa8.56□□□□□ -1.04
CPSF7-212ENST00000489728 CXorf58Q96LI9 332 aa8.56□□□□□ -1.04
CPSF7-212ENST00000489728 FANCD2OSQ96PS1 177 aa8.56□□□□□ -1.04
CPSF7-212ENST00000489728 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-212ENST00000489728 F11RQ9Y624 299 aaKnown RBP8.56□□□□□ -1.04
CPSF7-212ENST00000489728 TRBV7-1A0A0A6YYK4 115 aa8.55□□□□□ -1.04
CPSF7-212ENST00000489728 DBX1A6NMT0 343 aa8.55□□□□□ -1.04
CPSF7-212ENST00000489728 PLA2G10O15496 165 aa8.55□□□□□ -1.04
CPSF7-212ENST00000489728 UPK1BO75841 260 aa8.55□□□□□ -1.04
CPSF7-212ENST00000489728 SFT2D2O95562 160 aa8.55□□□□□ -1.04
CPSF7-212ENST00000489728 IGHV3-11P01762 117 aa8.55□□□□□ -1.04
CPSF7-212ENST00000489728 SLC25A6P12236 298 aa8.55□□□□□ -1.04
CPSF7-212ENST00000489728 VAMP1P23763 118 aa8.55□□□□□ -1.04
CPSF7-212ENST00000489728 MECP2P51608 486 aaKnown RBP8.55□□□□□ -1.04
CPSF7-212ENST00000489728 RAB25P57735 213 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms