RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 CDH26Q8IXH8 852 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 FAM24BQ8N5W8 94 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 CSNK1G2-AS1Q8NCQ2 148 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 FRZBQ92765 325 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 ZNF414Q96IQ9 312 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 OR2A7Q96R45 310 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 RHPN1-AS1Q9BWJ2 59 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 OR51E2Q9H255 320 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 AMBNQ9NP70 447 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 PLEKHJ1Q9NW61 149 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 IGHV3OR16-13A0A075B7E8 117 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 IGHV3-74A0A0B4J1X5 117 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 IGHV7-4-1A0A0J9YVY3 117 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 CGB1A6NKQ9 187 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 ANKRD65E5RJM6 399 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 RAB27BO00194 218 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 DCTN3O75935 186 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 FLOT2Q14254 428 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 ATP6AP1Q15904 470 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 BAK1Q16611 211 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 CCDC58Q4VC31 144 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 TRPT1Q86TN4 253 aaKnown RBP6.5□□□□□ -1.37
SSBP1-212ENST00000489378 STHQ8IWL8 128 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 OR52I1Q8NGK6 324 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 GGHQ92820 318 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 ADTRPQ96IZ2 230 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 FAM210BQ96KR6 192 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 DCUN1D5Q9BTE7 237 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 YTHDF1Q9BYJ9 559 aaKnown RBP6.5□□□□□ -1.37
SSBP1-212ENST00000489378 RIMS4Q9H426 269 aaPredicted RBP6.5□□□□□ -1.37
SSBP1-212ENST00000489378 RNF167Q9H6Y7 350 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 TMEM14BQ9NUH8 114 aa6.5□□□□□ -1.37
SSBP1-212ENST00000489378 TRDCB7Z8K6 153 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 BET1O15155 118 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 SOCS1O15524 211 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 OGG1O15527 345 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 FCGR3BO75015 233 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 KBTBD11O94819 623 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 LALBAP00709 142 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 SRMP19623 302 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 UNC119Q13432 240 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 Q499Y3 187 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 TMEM41BQ5BJD5 291 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 IGSF11Q5DX21 431 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 OR2B11Q5JQS5 317 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 AMIGO2Q86SJ2 522 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 SYT8Q8NBV8 401 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 TMEM116Q8NCL8 245 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 TMEM167AQ8TBQ9 72 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 SMIM19Q96E16 107 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 TM2D1Q9BX74 207 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 TMEM59Q9BXS4 323 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 PPP1R14DQ9NXH3 145 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 GHRLQ9UBU3 117 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 MGAT4AQ9UM21 535 aa6.49□□□□□ -1.37
SSBP1-212ENST00000489378 IGHV3-21A0A0B4J1V1 117 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 TRAV34A0A0B4J273 112 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 A4D1N5 150 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 SNTNA6NMZ2 147 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 C15orf62A8K5M9 175 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 EBAG9O00559 213 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 S100A9P06702 114 aaKnown RBP6.48□□□□□ -1.37
SSBP1-212ENST00000489378 SPP1P10451 314 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 HTN3P15516 51 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 SERPINB10P48595 397 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 FAM3BP58499 235 aaPredicted RBP6.48□□□□□ -1.37
SSBP1-212ENST00000489378 CTAG1AP78358 180 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 ARFRP1Q13795 201 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 CT83Q5H943 113 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 ZNF66Q6ZN08 573 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 PUSL1Q8N0Z8 303 aaKnown RBP6.48□□□□□ -1.37
SSBP1-212ENST00000489378 ZBTB8BQ8NAP8 495 aaPredicted RBP6.48□□□□□ -1.37
SSBP1-212ENST00000489378 ZNRF2Q8NHG8 242 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 VN1R17PQ8TDU5 208 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 BSCL2Q96G97 398 aaPredicted RBP6.48□□□□□ -1.37
SSBP1-212ENST00000489378 CMTM3Q96MX0 182 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 SLC29A1Q99808 456 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 UQCC2Q9BRT2 126 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 C12orf4Q9NQ89 552 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 TMED3Q9Y3Q3 217 aa6.48□□□□□ -1.37
SSBP1-212ENST00000489378 IGLC7A0M8Q6 106 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 KNCNA6PVL3 124 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 FABP7O15540 132 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 DFFBO76075 338 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 S100A6P06703 90 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 GABRB1P18505 474 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 CELP19835 753 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 CRHBPP24387 322 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 MAS1LP35410 378 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 FUSP35637 526 aaKnown RBP eCLIP6.47□□□□□ -1.375e-7■□□□□ 8.7
SSBP1-212ENST00000489378 EMP1P54849 157 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 RPL30P62888 115 aaKnown RBP6.47□□□□□ -1.37
SSBP1-212ENST00000489378 PLA2G7Q13093 441 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 SLC25A24Q6NUK1 477 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 TMEM88Q6PEY1 159 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 SPSB3Q6PJ21 355 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 TCF24Q7RTU0 167 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 LINC00469Q8N7U9 141 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 ZFP41Q8N8Y5 198 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 OR4A4PQ8NGN8 299 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms