RNA–Protein interactions for RNA: ENST00000489300.1

CDK11A-218, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-218ENST00000489300 ZNF491Q8N8L2 437 aa13.64□□□□□ -0.23
CDK11A-218ENST00000489300 C4orf3Q8WVX3 66 aa13.64□□□□□ -0.23
CDK11A-218ENST00000489300 RBPMSQ93062 196 aaKnown RBP13.64□□□□□ -0.23
CDK11A-218ENST00000489300 USMG5Q96IX5 58 aa13.64□□□□□ -0.23
CDK11A-218ENST00000489300 MS4A10Q96PG2 267 aa13.64□□□□□ -0.23
CDK11A-218ENST00000489300 ZNF257Q9Y2Q1 563 aa13.64□□□□□ -0.23
CDK11A-218ENST00000489300 NPIPB5A8MRT5 1133 aa13.63□□□□□ -0.23
CDK11A-218ENST00000489300 PRAF2O60831 178 aa13.63□□□□□ -0.23
CDK11A-218ENST00000489300 NDUFB6O95139 128 aa13.63□□□□□ -0.23
CDK11A-218ENST00000489300 DEFA4P12838 97 aa13.63□□□□□ -0.23
CDK11A-218ENST00000489300 HIST1H1BP16401 226 aaKnown RBP13.63□□□□□ -0.23
CDK11A-218ENST00000489300 MYCNOSP40205 109 aa13.63□□□□□ -0.23
CDK11A-218ENST00000489300 OR2B8PP59922 312 aa13.63□□□□□ -0.23
CDK11A-218ENST00000489300 FAM209BQ5JX69 171 aa13.63□□□□□ -0.23
CDK11A-218ENST00000489300 LGI3Q8N145 548 aa13.63□□□□□ -0.23
CDK11A-218ENST00000489300 ADAD2Q8NCV1 583 aaKnown RBP13.63□□□□□ -0.23
CDK11A-218ENST00000489300 C20orf85Q9H1P6 137 aa13.63□□□□□ -0.23
CDK11A-218ENST00000489300 KLK15Q9H2R5 256 aa13.63□□□□□ -0.23
CDK11A-218ENST00000489300 THYN1Q9P016 225 aa13.63□□□□□ -0.23
CDK11A-218ENST00000489300 TMEM56-RWDD3S4R434 201 aa13.63□□□□□ -0.23
CDK11A-218ENST00000489300 FAM223BA6NKX1 122 aa13.62□□□□□ -0.23
CDK11A-218ENST00000489300 C15orf61A6NNL5 157 aa13.62□□□□□ -0.23
CDK11A-218ENST00000489300 ADARB2-AS1A8MUL3 147 aa13.62□□□□□ -0.23
CDK11A-218ENST00000489300 IGKV1-39P01597 117 aa13.62□□□□□ -0.23
CDK11A-218ENST00000489300 IGKV1D-39P04432 117 aa13.62□□□□□ -0.23
CDK11A-218ENST00000489300 APELAP0DMC3 54 aa13.62□□□□□ -0.23
CDK11A-218ENST00000489300 PSMB6P28072 239 aa13.62□□□□□ -0.23
CDK11A-218ENST00000489300 MECP2P51608 486 aaKnown RBP13.62□□□□□ -0.23
CDK11A-218ENST00000489300 C10orf55Q5SWW7 151 aa13.62□□□□□ -0.23
CDK11A-218ENST00000489300 TMEM268Q5VZI3 342 aa13.62□□□□□ -0.23
CDK11A-218ENST00000489300 FAM223AQ8IWN6 122 aa13.62□□□□□ -0.23
CDK11A-218ENST00000489300 OR1L6Q8NGR2 347 aa13.62□□□□□ -0.23
CDK11A-218ENST00000489300 MYOZ3Q8TDC0 251 aa13.62□□□□□ -0.23
CDK11A-218ENST00000489300 GLYATL2Q8WU03 294 aa13.62□□□□□ -0.23
CDK11A-218ENST00000489300 DPF1Q92782 380 aa13.62□□□□□ -0.23
CDK11A-218ENST00000489300 LSM10Q969L4 123 aaKnown RBP13.62□□□□□ -0.23
CDK11A-218ENST00000489300 HINT2Q9BX68 163 aa13.62□□□□□ -0.23
CDK11A-218ENST00000489300 TMEM14BQ9NUH8 114 aa13.62□□□□□ -0.23
CDK11A-218ENST00000489300 TRRAPQ9Y4A5 3859 aa13.62□□□□□ -0.23
CDK11A-218ENST00000489300 TRAV3A0A0B4J244 114 aa13.61□□□□□ -0.23
CDK11A-218ENST00000489300 TEX50A0A1B0GTY4 177 aa13.61□□□□□ -0.23
CDK11A-218ENST00000489300 TEX22C9J3V5 150 aa13.61□□□□□ -0.23
CDK11A-218ENST00000489300 SOX15O60248 233 aa13.61□□□□□ -0.23
CDK11A-218ENST00000489300 TSPAN15O95858 294 aa13.61□□□□□ -0.23
CDK11A-218ENST00000489300 CRYGCP07315 174 aa13.61□□□□□ -0.23
CDK11A-218ENST00000489300 VAMP1P23763 118 aa13.61□□□□□ -0.23
CDK11A-218ENST00000489300 RUNX1Q01196 453 aa13.61□□□□□ -0.23
CDK11A-218ENST00000489300 ASPHD1Q5U4P2 390 aa13.61□□□□□ -0.23
CDK11A-218ENST00000489300 LCNL1Q6ZST4 164 aa13.61□□□□□ -0.23
CDK11A-218ENST00000489300 C8orf86Q6ZUL3 223 aa13.61□□□□□ -0.23
CDK11A-218ENST00000489300 ZNF429Q86V71 674 aa13.61□□□□□ -0.23
CDK11A-218ENST00000489300 SELENOHQ8IZQ5 122 aaKnown RBP13.61□□□□□ -0.23
CDK11A-218ENST00000489300 MED28Q9H204 178 aa13.61□□□□□ -0.23
CDK11A-218ENST00000489300 GPN1Q9HCN4 374 aaPredicted RBP13.61□□□□□ -0.23
CDK11A-218ENST00000489300 ENY2Q9NPA8 101 aa13.61□□□□□ -0.23
CDK11A-218ENST00000489300 NDUFA4L2Q9NRX3 87 aa13.61□□□□□ -0.23
CDK11A-218ENST00000489300 NSG2Q9Y328 171 aa13.61□□□□□ -0.23
CDK11A-218ENST00000489300 DUXBA0A1W2PPF3 345 aa13.6□□□□□ -0.23
CDK11A-218ENST00000489300 BOLA2-SMG1P6H3BVE0 249 aa13.6□□□□□ -0.23
CDK11A-218ENST00000489300 CCL24O00175 119 aa13.6□□□□□ -0.23
CDK11A-218ENST00000489300 IFNA17P01571 189 aa13.6□□□□□ -0.23
CDK11A-218ENST00000489300 CD33P20138 364 aa13.6□□□□□ -0.23
CDK11A-218ENST00000489300 HSPE1P61604 102 aaKnown RBP13.6□□□□□ -0.23
CDK11A-218ENST00000489300 ERHP84090 104 aaKnown RBP13.6□□□□□ -0.23
CDK11A-218ENST00000489300 ATP5G2Q06055 141 aa13.6□□□□□ -0.23
CDK11A-218ENST00000489300 TMEM187Q14656 261 aa13.6□□□□□ -0.23
CDK11A-218ENST00000489300 HIST2H2BDQ6DRA6 164 aa13.6□□□□□ -0.23
CDK11A-218ENST00000489300 NECAP1Q8NC96 275 aa13.6□□□□□ -0.23
CDK11A-218ENST00000489300 TMEM230Q96A57 120 aa13.6□□□□□ -0.23
CDK11A-218ENST00000489300 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.6□□□□□ -0.23
CDK11A-218ENST00000489300 TET2Q6N021 2002 aaPredicted RBP13.59□□□□□ -0.23
CDK11A-218ENST00000489300 A0A0B4J293 547 aa13.59□□□□□ -0.23
CDK11A-218ENST00000489300 A0A0B4J2A0 478 aa13.59□□□□□ -0.23
CDK11A-218ENST00000489300 IGKV1-5P01602 117 aa13.59□□□□□ -0.23
CDK11A-218ENST00000489300 LGALS1P09382 135 aaKnown RBP13.59□□□□□ -0.23
CDK11A-218ENST00000489300 EIF2B2P49770 351 aaKnown RBP13.59□□□□□ -0.23
CDK11A-218ENST00000489300 RRAS2P62070 204 aaPredicted RBP13.59□□□□□ -0.23
CDK11A-218ENST00000489300 OR1N2Q8NGR9 330 aa13.59□□□□□ -0.23
CDK11A-218ENST00000489300 GPR61Q9BZJ8 451 aa13.59□□□□□ -0.23
CDK11A-218ENST00000489300 PLEKHA3Q9HB20 300 aa13.59□□□□□ -0.23
CDK11A-218ENST00000489300 SHPKQ9UHJ6 478 aa13.59□□□□□ -0.23
CDK11A-218ENST00000489300 C7orf66A4D0T2 115 aa13.58□□□□□ -0.24
CDK11A-218ENST00000489300 E7EUB6 86 aa13.58□□□□□ -0.24
CDK11A-218ENST00000489300 SSNA1O43805 119 aa13.58□□□□□ -0.24
CDK11A-218ENST00000489300 SFT2D2O95562 160 aa13.58□□□□□ -0.24
CDK11A-218ENST00000489300 DUS4LO95620 317 aaKnown RBP13.58□□□□□ -0.24
CDK11A-218ENST00000489300 HSPB1P04792 205 aaKnown RBP13.58□□□□□ -0.24
CDK11A-218ENST00000489300 OR8U8P0C7N1 319 aa13.58□□□□□ -0.24
CDK11A-218ENST00000489300 OR13C7P0DN81 318 aa13.58□□□□□ -0.24
CDK11A-218ENST00000489300 CTRB1P17538 263 aa13.58□□□□□ -0.24
CDK11A-218ENST00000489300 PRCDQ00LT1 54 aa13.58□□□□□ -0.24
CDK11A-218ENST00000489300 KIAA0141Q14154 515 aaPredicted RBP13.58□□□□□ -0.24
CDK11A-218ENST00000489300 C4orf46Q504U0 113 aa13.58□□□□□ -0.24
CDK11A-218ENST00000489300 CTRB2Q6GPI1 263 aa13.58□□□□□ -0.24
CDK11A-218ENST00000489300 OR11H1Q8NG94 326 aa13.58□□□□□ -0.24
CDK11A-218ENST00000489300 COQ8AQ8NI60 647 aa13.58□□□□□ -0.24
CDK11A-218ENST00000489300 CASTOR1Q8WTX7 329 aa13.58□□□□□ -0.24
CDK11A-218ENST00000489300 MCRIP2Q9BUT9 160 aaKnown RBP13.58□□□□□ -0.24
CDK11A-218ENST00000489300 FLVCR2Q9UPI3 526 aa13.58□□□□□ -0.24
CDK11A-218ENST00000489300 I3L521 148 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms