RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 HIST1H2BDP58876 126 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 TPI1P60174 286 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 HIST1H2BCP62807 126 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 HBA1P69905 142 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 CCL20P78556 96 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 ERHP84090 104 aaKnown RBP1.32□□□□□ -2.2
RFC4-213ENST00000489028 RPL18Q07020 188 aaKnown RBP1.32□□□□□ -2.2
RFC4-213ENST00000489028 KCNJ8Q15842 424 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 HIST2H2BEQ16778 126 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 ZNF181Q2M3W8 571 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 LIN52Q52LA3 116 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.32□□□□□ -2.2
RFC4-213ENST00000489028 RPL22L1Q6P5R6 122 aaKnown RBP1.32□□□□□ -2.2
RFC4-213ENST00000489028 OOSP2Q86WS3 158 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 GDPD1Q8N9F7 314 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 OR8B12Q8NGG6 310 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 CDC26Q8NHZ8 85 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 CT55Q8WUE5 264 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 KLK6Q92876 244 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 HIST1H2BHQ93079 126 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 TSPAN32Q96QS1 320 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 SIGMAR1Q99720 223 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 HIST1H2BNQ99877 126 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 HIST1H2BMQ99879 126 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 NIPSNAP1Q9BPW8 284 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 TMEM147Q9BVK8 224 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 C20orf27Q9GZN8 174 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 CCDC90BQ9GZT6 254 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 CISHQ9NSE2 258 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 FBXL12Q9NXK8 326 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 NAT8Q9UHE5 227 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 SAMHD1Q9Y3Z3 626 aaKnown RBP1.32□□□□□ -2.2
RFC4-213ENST00000489028 ARL5AQ9Y689 179 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 TRAV9-1A0A075B6T8 112 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 FAM236DA0A1B0GTK5 79 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 EXOC1LA0A1B0GW35 172 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 GGT3PA6NGU5 568 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 FABP5P3A8MUU1 101 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 H3BT86 120 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 PDE6DO43924 150 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 OR7C1O76099 320 aaPredicted RBP1.31□□□□□ -2.2
RFC4-213ENST00000489028 IFNA10P01566 189 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 LGALS1P09382 135 aaKnown RBP1.31□□□□□ -2.2
RFC4-213ENST00000489028 RBP1P09455 135 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 SULT1A3P0DMM9 295 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 SULT1A4P0DMN0 295 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 FAM236CP0DP71 79 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 CCL5P13501 91 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 CSRP1P21291 193 aaKnown RBP1.31□□□□□ -2.2
RFC4-213ENST00000489028 NFYAP23511 347 aaPredicted RBP1.31□□□□□ -2.2
RFC4-213ENST00000489028 HLA-DMBP28068 263 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 MAGEA12P43365 314 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 RPL28P46779 137 aaKnown RBP1.31□□□□□ -2.2
RFC4-213ENST00000489028 RPS20P60866 119 aaKnown RBP1.31□□□□□ -2.2
RFC4-213ENST00000489028 RAB14P61106 215 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 TMEM258P61165 79 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 KRTAP13-4Q3LI77 160 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 IBA57Q5T440 356 aaKnown RBP1.31□□□□□ -2.2
RFC4-213ENST00000489028 KRT222Q8N1A0 295 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 DYNAPQ8N1N2 210 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 RPP25LQ8N5L8 163 aaKnown RBP1.31□□□□□ -2.2
RFC4-213ENST00000489028 ZNF676Q8N7Q3 588 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 OR51A2Q8NGJ7 313 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 OR51T1Q8NGJ9 327 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 OR13C4Q8NGS5 318 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 TOMM6Q96B49 74 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 DGCR14Q96DF8 476 aaKnown RBP1.31□□□□□ -2.2
RFC4-213ENST00000489028 CEP19Q96LK0 163 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 STOML2Q9UJZ1 356 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 RBM7Q9Y580 266 aaKnown RBP1.31□□□□□ -2.2
RFC4-213ENST00000489028 TIMM22Q9Y584 194 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 TRPM6Q9BX84 2022 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 MYO9BQ13459 2157 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 CACNA1SQ13698 1873 aa1.31□□□□□ -2.2
RFC4-213ENST00000489028 SLIT2O94813 1529 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 DOCK6Q96HP0 2047 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 REREQ9P2R6 1566 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 TRAV7A0A075B6U4 112 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 TRAV38-1A0A0B4J264 116 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 ARRDC5A6NEK1 342 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 DPRXA6NFQ7 191 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 H7C2G1 150 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 J3QQQ9 107 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 SLC22A1O15245 554 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 IGHV3-7P01780 117 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 SERPINE1P05121 402 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 CST2P09228 141 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 S100A5P33763 92 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 RPL26P61254 145 aaKnown RBP1.3□□□□□ -2.2
RFC4-213ENST00000489028 RELAQ04206 551 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 GLO1Q04760 184 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 SS18Q15532 418 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 AADACL3Q5VUY0 350 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 TEX36Q5VZQ5 186 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 Q6ZTI0 123 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 PHB2Q99623 299 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 DOHHQ9BU89 302 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 DERL1Q9BUN8 251 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 CHST6Q9GZX3 395 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 C11orf68Q9H3H3 251 aaKnown RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms