RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 SRP19P09132 144 aaKnown RBP0.1□□□□□ -2.39
SMC4-219ENST00000487747 S100A7P31151 101 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 RAB13P51153 203 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 OR4D2P58180 307 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 UBE2IP63279 158 aaKnown RBP0.1□□□□□ -2.39
SMC4-219ENST00000487747 DMTNQ08495 405 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 ANGPT1Q15389 498 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 SYPL2Q5VXT5 272 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 TNFAIP8L2Q6P589 184 aaPredicted RBP0.1□□□□□ -2.39
SMC4-219ENST00000487747 ZNF826PQ6ZT77 177 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 ZNF550Q7Z398 422 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 SYCE1Q8N0S2 351 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 Q8N402 240 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 TMEM251Q8N6I4 163 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 Q8N6K4 173 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 C11orf40Q8WZ69 217 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 ROPN1LQ96C74 230 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 ERMAPQ96PL5 475 aaPredicted RBP0.1□□□□□ -2.39
SMC4-219ENST00000487747 SPACA1Q9HBV2 294 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 DKKL1Q9UK85 242 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 CFAP45Q9UL16 551 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 ZFP30Q9Y2G7 519 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 POLR1DQ9Y2S0 133 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 PXMP4Q9Y6I8 212 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 FAT4Q6V0I7 4981 aa0.1□□□□□ -2.39
SMC4-219ENST00000487747 M0R2N4 97 aa0.09□□□□□ -2.4
SMC4-219ENST00000487747 COCHO43405 550 aa0.09□□□□□ -2.4
SMC4-219ENST00000487747 FAM228BP0C875 321 aa0.09□□□□□ -2.4
SMC4-219ENST00000487747 PET100P0DJ07 73 aa0.09□□□□□ -2.4
SMC4-219ENST00000487747 UGT2B7P16662 529 aa0.09□□□□□ -2.4
SMC4-219ENST00000487747 CDK10Q15131 360 aa0.09□□□□□ -2.4
SMC4-219ENST00000487747 IBA57Q5T440 356 aaKnown RBP0.09□□□□□ -2.4
SMC4-219ENST00000487747 DNAJB3Q8WWF6 145 aa0.09□□□□□ -2.4
SMC4-219ENST00000487747 KCTD7Q96MP8 289 aa0.09□□□□□ -2.4
SMC4-219ENST00000487747 PAQR5Q9NXK6 330 aaPredicted RBP0.09□□□□□ -2.4
SMC4-219ENST00000487747 FUT9Q9Y231 359 aa0.09□□□□□ -2.4
SMC4-219ENST00000487747 CNTRLQ7Z7A1 2325 aa0.09□□□□□ -2.4
SMC4-219ENST00000487747 MCM3APO60318 1980 aa0.08□□□□□ -2.4
SMC4-219ENST00000487747 GGT3PA6NGU5 568 aa0.08□□□□□ -2.4
SMC4-219ENST00000487747 C21orf140B9A014 251 aa0.08□□□□□ -2.4
SMC4-219ENST00000487747 GOLGA6L19H0YKK7 550 aa0.08□□□□□ -2.4
SMC4-219ENST00000487747 NOS1APO75052 506 aaPredicted RBP0.08□□□□□ -2.4
SMC4-219ENST00000487747 PRH1P02810 166 aa0.08□□□□□ -2.4
SMC4-219ENST00000487747 CDC34P49427 236 aaPredicted RBP0.08□□□□□ -2.4
SMC4-219ENST00000487747 CCL20P78556 96 aa0.08□□□□□ -2.4
SMC4-219ENST00000487747 PDE6HQ13956 83 aa0.08□□□□□ -2.4
SMC4-219ENST00000487747 KISS1Q15726 138 aa0.08□□□□□ -2.4
SMC4-219ENST00000487747 LCN15Q6UWW0 184 aa0.08□□□□□ -2.4
SMC4-219ENST00000487747 Q6ZQT0 140 aa0.08□□□□□ -2.4
SMC4-219ENST00000487747 FUNDC1Q8IVP5 155 aa0.08□□□□□ -2.4
SMC4-219ENST00000487747 OR5B17Q8NGF7 314 aa0.08□□□□□ -2.4
SMC4-219ENST00000487747 ZNF418Q8TF45 676 aaPredicted RBP0.08□□□□□ -2.4
SMC4-219ENST00000487747 DCUN1D5Q9BTE7 237 aa0.08□□□□□ -2.4
SMC4-219ENST00000487747 OR51I2Q9H344 312 aa0.08□□□□□ -2.4
SMC4-219ENST00000487747 IMP3Q9NV31 184 aaKnown RBP0.08□□□□□ -2.4
SMC4-219ENST00000487747 IL36BQ9NZH7 164 aa0.08□□□□□ -2.4
SMC4-219ENST00000487747 TTC21AQ8NDW8 1320 aa0.08□□□□□ -2.4
SMC4-219ENST00000487747 SYNE1Q8NF91 8797 aaKnown RBP0.08□□□□□ -2.4
SMC4-219ENST00000487747 CEP192Q8TEP8 1941 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 DCCP43146 1447 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 FUOMA2VDF0 154 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 FABP5P3A8MUU1 101 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 OR2T1O43869 369 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 OR5F1O95221 314 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 PRM2P04554 102 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 CTSDP07339 412 aaPredicted RBP0.07□□□□□ -2.4
SMC4-219ENST00000487747 C8orf88P0DMB2 117 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 RPS4Y1P22090 263 aaKnown RBP0.07□□□□□ -2.4
SMC4-219ENST00000487747 ZNF93P35789 620 aaPredicted RBP0.07□□□□□ -2.4
SMC4-219ENST00000487747 MAP3K7CLP57077 242 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 CAV1Q03135 178 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 FABP9Q0Z7S8 132 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 PPP1R1AQ13522 171 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 CST9Q5W186 159 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 HIST2H3AQ71DI3 136 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 DEFB128Q7Z7B8 93 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 C10orf67Q8IYJ2 551 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 C1orf158Q8N1D5 194 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 Q8N814 137 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 GPR32P1Q8NGA4 272 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 RASSF5Q8WWW0 418 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 CHMP4BQ9H444 224 aaKnown RBP0.07□□□□□ -2.4
SMC4-219ENST00000487747 C10orf95Q9H7T3 257 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 CISHQ9NSE2 258 aa0.07□□□□□ -2.4
SMC4-219ENST00000487747 IBTKQ9P2D0 1353 aaPredicted RBP0.06□□□□□ -2.4
SMC4-219ENST00000487747 ERICH2A1L162 156 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 C2orf70A6NJV1 201 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 C10orf142B7Z368 130 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 GOLGA8MH3BSY2 632 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 INE1O15225 51 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 CALUO43852 315 aaPredicted RBP0.06□□□□□ -2.4
SMC4-219ENST00000487747 FADS1O60427 444 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 HTR1AP08908 422 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 OCMP0CE72 109 aaPredicted RBP0.06□□□□□ -2.4
SMC4-219ENST00000487747 KCNE1P15382 129 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 STX5Q13190 355 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 KRTAP19-2Q3LHN2 52 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 GLT8D1Q68CQ7 371 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 SPATA8Q6RVD6 105 aa0.06□□□□□ -2.4
SMC4-219ENST00000487747 AAED1Q7RTV5 226 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms