RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 GALNT14Q96FL9 552 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 RAX2Q96IS3 184 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 ALX4Q9H161 411 aaPredicted RBP9.2□□□□□ -0.94
HPS4-214ENST00000485842 FKBP11Q9NYL4 201 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 ZNF257Q9Y2Q1 563 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 VWFP04275 2813 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 A0A0G2JRQ6 117 aa9.19□□□□□ -0.94
HPS4-214ENST00000485842 C13orf42A0A1B0GVH6 325 aa9.19□□□□□ -0.94
HPS4-214ENST00000485842 IGLC7A0M8Q6 106 aa9.19□□□□□ -0.94
HPS4-214ENST00000485842 NPIPB5A8MRT5 1133 aa9.19□□□□□ -0.94
HPS4-214ENST00000485842 CCL24O00175 119 aa9.19□□□□□ -0.94
HPS4-214ENST00000485842 FGF2P09038 288 aa9.19□□□□□ -0.94
HPS4-214ENST00000485842 LGALS1P09382 135 aaKnown RBP9.19□□□□□ -0.94
HPS4-214ENST00000485842 ANXA3P12429 323 aa9.19□□□□□ -0.94
HPS4-214ENST00000485842 CD33P20138 364 aa9.19□□□□□ -0.94
HPS4-214ENST00000485842 PSMB6P28072 239 aa9.19□□□□□ -0.94
HPS4-214ENST00000485842 MYCNOSP40205 109 aa9.19□□□□□ -0.94
HPS4-214ENST00000485842 RHOGP84095 191 aa9.19□□□□□ -0.94
HPS4-214ENST00000485842 TMEM128Q5BJH2 165 aa9.19□□□□□ -0.94
HPS4-214ENST00000485842 SELENOHQ8IZQ5 122 aaKnown RBP9.19□□□□□ -0.94
HPS4-214ENST00000485842 CADM3Q8N126 398 aa9.19□□□□□ -0.94
HPS4-214ENST00000485842 OR5B3Q8NH48 314 aa9.19□□□□□ -0.94
HPS4-214ENST00000485842 TMEM14BQ9NUH8 114 aa9.19□□□□□ -0.94
HPS4-214ENST00000485842 FLVCR2Q9UPI3 526 aa9.19□□□□□ -0.94
HPS4-214ENST00000485842 A0A0G2JLM5 398 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 I3L521 148 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 OR2J3O76001 311 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 DHFRP00374 187 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 P0C879 139 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 OR13C7P0DN81 318 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 DEFA4P12838 97 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 SRPXP78539 464 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 PPP1R1AQ13522 171 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 SPINK9Q5DT21 86 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 THOC7Q6I9Y2 204 aaKnown RBP9.18□□□□□ -0.94
HPS4-214ENST00000485842 FAM219AQ8IW50 185 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 MRPL41Q8IXM3 137 aaKnown RBP9.18□□□□□ -0.94
HPS4-214ENST00000485842 SLC35G3Q8N808 338 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 OR11H1Q8NG94 326 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 IL22RA2Q969J5 263 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 LSM10Q969L4 123 aaKnown RBP9.18□□□□□ -0.94
HPS4-214ENST00000485842 TMEM56Q96MV1 263 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 PDCD10Q9BUL8 212 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 NDUFA4L2Q9NRX3 87 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 TMEM56-RWDD3S4R434 201 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 PKD1L1Q8TDX9 2849 aa9.18□□□□□ -0.94
HPS4-214ENST00000485842 MGAM2Q2M2H8 2515 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 TRRAPQ9Y4A5 3859 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 IGHV4OR15-8A0A075B7B6 117 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 A0A087WW49 117 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 A0A0B4J293 547 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 ANKRD34BA5PLL1 514 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 FAM223BA6NKX1 122 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 ST8SIA3O43173 380 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 UPK1BO75841 260 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 BRI3O95415 125 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 CTRB1P17538 263 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 RUNX1Q01196 453 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 WT1-ASQ06250 92 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 ZNF616Q08AN1 781 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 EXOSC2Q13868 293 aaKnown RBP9.17□□□□□ -0.94
HPS4-214ENST00000485842 CTRB2Q6GPI1 263 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 FAM223AQ8IWN6 122 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 LGI3Q8N145 548 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 LINC00482Q8N8I6 264 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 OR1N2Q8NGR9 330 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 DPF1Q92782 380 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 GPR146Q96CH1 333 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 P2RX4Q99571 388 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 SRSF8Q9BRL6 282 aaKnown RBP9.17□□□□□ -0.94
HPS4-214ENST00000485842 C20orf85Q9H1P6 137 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 CACNG5Q9UF02 275 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 TBC1D24Q9ULP9 559 aa9.17□□□□□ -0.94
HPS4-214ENST00000485842 TRBV9A0A0B4J1U6 114 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 A0A0B4J2A0 478 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 SFT2D2O95562 160 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 IFNA17P01571 189 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 HLA-AP01891 365 aaKnown RBP9.16□□□□□ -0.94
HPS4-214ENST00000485842 CRYGCP07315 174 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 ANXA7P20073 488 aaKnown RBP9.16□□□□□ -0.94
HPS4-214ENST00000485842 HOXA1P49639 335 aaPredicted RBP9.16□□□□□ -0.94
HPS4-214ENST00000485842 HSPE1P61604 102 aaKnown RBP9.16□□□□□ -0.94
HPS4-214ENST00000485842 PRCDQ00LT1 54 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 ATP5G2Q06055 141 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 ASAH1Q13510 395 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 ANKRD55Q3KP44 614 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 MZT2BQ6NZ67 158 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 Q6ZRM9 215 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 LYZL2Q7Z4W2 148 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 HSD17B13Q7Z5P4 300 aaPredicted RBP9.16□□□□□ -0.94
HPS4-214ENST00000485842 ZNF429Q86V71 674 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 NECAP1Q8NC96 275 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 USMG5Q96IX5 58 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 FANCD2OSQ96PS1 177 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 PLEKHA3Q9HB20 300 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 SHPKQ9UHJ6 478 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 FBXL7Q9UJT9 491 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 S4R3C0 116 aa9.16□□□□□ -0.94
HPS4-214ENST00000485842 IGLV11-55A0A075B6I3 123 aa9.15□□□□□ -0.94
HPS4-214ENST00000485842 TRAV6A0A075B6T7 132 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms