RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 RAB3DO95716 219 aa9.75□□□□□ -0.85
HDAC6-227ENST00000485102 CD74P04233 296 aa9.75□□□□□ -0.85
HDAC6-227ENST00000485102 SAA1P0DJI8 122 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-227ENST00000485102 ATF4P18848 351 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-227ENST00000485102 HLA-DMAP28067 261 aa9.75□□□□□ -0.85
HDAC6-227ENST00000485102 FCGR2CP31995 323 aa9.75□□□□□ -0.85
HDAC6-227ENST00000485102 HRH1P35367 487 aa9.75□□□□□ -0.85
HDAC6-227ENST00000485102 SURF2Q15527 256 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-227ENST00000485102 GUCA2BQ16661 112 aa9.75□□□□□ -0.85
HDAC6-227ENST00000485102 ZNF645Q8N7E2 425 aa9.75□□□□□ -0.85
HDAC6-227ENST00000485102 GVQW1Q8N7I0 195 aa9.75□□□□□ -0.85
HDAC6-227ENST00000485102 WDR89Q96FK6 387 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-227ENST00000485102 ZNF486Q96H40 463 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-227ENST00000485102 HSD17B10Q99714 261 aaKnown RBP9.75□□□□□ -0.85
HDAC6-227ENST00000485102 KRTAP17-1Q9BYP8 105 aa9.75□□□□□ -0.85
HDAC6-227ENST00000485102 KLK11Q9UBX7 282 aa9.75□□□□□ -0.85
HDAC6-227ENST00000485102 ELF5Q9UKW6 265 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-227ENST00000485102 V9GYH0 126 aa9.75□□□□□ -0.85
HDAC6-227ENST00000485102 ANKRD20A5PA0PJZ0 165 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 NPIPB5A8MRT5 1133 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 TEX22C9J3V5 150 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 B3GALNT1O75752 331 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 OR2J3O76001 311 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 OR2C1O95371 312 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 PPYP01298 95 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 CRYGCP07315 174 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 PPP5CP53041 499 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 UCP3P55916 312 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 CATR1Q13166 79 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 ANKRD55Q3KP44 614 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 TMEM61Q8N0U2 210 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 ZFAND1Q8TCF1 268 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 CD300LFQ8TDQ1 290 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 MAFIPQ8WZ33 124 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 FANCD2OSQ96PS1 177 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 GGTLC1Q9BX51 225 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 SRRQ9GZT4 340 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 SLC2A9Q9NRM0 540 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 TP53TG1Q9Y2A0 90 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 PRELID3BQ9Y3B1 194 aa9.74□□□□□ -0.85
HDAC6-227ENST00000485102 LOC102724200A0A096LPH7 203 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-227ENST00000485102 TRAV25A0A0B4J276 109 aa9.73□□□□□ -0.85
HDAC6-227ENST00000485102 TMEM213A2RRL7 107 aa9.73□□□□□ -0.85
HDAC6-227ENST00000485102 MEIS3P1A6NDR6 274 aa9.73□□□□□ -0.85
HDAC6-227ENST00000485102 NUPR2A6NF83 97 aa9.73□□□□□ -0.85
HDAC6-227ENST00000485102 PPP5D1E7EU14 171 aa9.73□□□□□ -0.85
HDAC6-227ENST00000485102 PMP2P02689 132 aa9.73□□□□□ -0.85
HDAC6-227ENST00000485102 MAS1LP35410 378 aa9.73□□□□□ -0.85
HDAC6-227ENST00000485102 TNFRSF9Q07011 255 aa9.73□□□□□ -0.85
HDAC6-227ENST00000485102 FAM106AQ4KMX7 169 aa9.73□□□□□ -0.85
HDAC6-227ENST00000485102 ZNF57Q68EA5 555 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-227ENST00000485102 OR4A47Q6IF82 309 aa9.73□□□□□ -0.85
HDAC6-227ENST00000485102 ZNF66Q6ZN08 573 aa9.73□□□□□ -0.85
HDAC6-227ENST00000485102 LYSMD2Q8IV50 215 aa9.73□□□□□ -0.85
HDAC6-227ENST00000485102 SLC38A6Q8IZM9 456 aa9.73□□□□□ -0.85
HDAC6-227ENST00000485102 MOB3AQ96BX8 217 aa9.73□□□□□ -0.85
HDAC6-227ENST00000485102 ZNF2Q9BSG1 426 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-227ENST00000485102 FBXL7Q9UJT9 491 aa9.73□□□□□ -0.85
HDAC6-227ENST00000485102 NDUFB8O95169 186 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 HLA-AP01891 365 aaKnown RBP9.72□□□□□ -0.85
HDAC6-227ENST00000485102 CD3DP04234 171 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 IL6RP08887 468 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-227ENST00000485102 ZNF735P0CB33 412 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 C8orf88P0DMB2 117 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 PTHLHP12272 177 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 EDN2P20800 178 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 NFYAP23511 347 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-227ENST00000485102 PSMB6P28072 239 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 RFX2P48378 723 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 C10orf55Q5SWW7 151 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 Q6ZWC4 215 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 PUSL1Q8N0Z8 303 aaKnown RBP9.72□□□□□ -0.85
HDAC6-227ENST00000485102 CCDC71LQ8N9Z2 235 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 OR52B4Q8NGK2 314 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 TERB2Q8NHR7 220 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 VSTM2AQ8TAG5 236 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 TMEM167AQ8TBQ9 72 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 MARC2Q969Z3 335 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 CCDC140Q96MF4 163 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 FYTTD1Q96QD9 318 aaKnown RBP9.72□□□□□ -0.85
HDAC6-227ENST00000485102 SLC25A21Q9BQT8 299 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-227ENST00000485102 SLC5A7Q9GZV3 580 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 FAM212BQ9NTI7 297 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-227ENST00000485102 MLXQ9UH92 298 aa9.72□□□□□ -0.85
HDAC6-227ENST00000485102 IGKV1D-8A0A087WSZ0 117 aa9.71□□□□□ -0.86
HDAC6-227ENST00000485102 HMX3A6NHT5 357 aa9.71□□□□□ -0.86
HDAC6-227ENST00000485102 E7EUB6 86 aa9.71□□□□□ -0.86
HDAC6-227ENST00000485102 GPR31O00270 319 aa9.71□□□□□ -0.86
HDAC6-227ENST00000485102 FCGR3BO75015 233 aa9.71□□□□□ -0.86
HDAC6-227ENST00000485102 LY6G6CO95867 125 aa9.71□□□□□ -0.86
HDAC6-227ENST00000485102 DHFRP00374 187 aa9.71□□□□□ -0.86
HDAC6-227ENST00000485102 IGLV2-14P01704 120 aa9.71□□□□□ -0.86
HDAC6-227ENST00000485102 HIST1H1BP16401 226 aaKnown RBP9.71□□□□□ -0.86
HDAC6-227ENST00000485102 CTRB1P17538 263 aa9.71□□□□□ -0.86
HDAC6-227ENST00000485102 BMI1P35226 326 aa9.71□□□□□ -0.86
HDAC6-227ENST00000485102 ARL3P36405 182 aa9.71□□□□□ -0.86
HDAC6-227ENST00000485102 RPL27AP46776 148 aaKnown RBP9.71□□□□□ -0.86
HDAC6-227ENST00000485102 DEFA1P59665 94 aa9.71□□□□□ -0.86
HDAC6-227ENST00000485102 DEFA3P59666 94 aa9.71□□□□□ -0.86
HDAC6-227ENST00000485102 ZNF79Q15937 498 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms