RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 MAP6D1Q9H9H5 199 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 TMEM106BQ9NUM4 274 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 PRR14LQ5THK1 2151 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 A0A0X1KG70 313 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 CDS2O95674 445 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 PFN1P07737 140 aaKnown RBP4.2□□□□□ -1.74
CCDC39-205ENST00000485055 RNASE1P07998 156 aaKnown RBP4.2□□□□□ -1.74
CCDC39-205ENST00000485055 METTL15P1P0C7V9 234 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 T-ENOLP0DO92 83 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 DDTP30046 118 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 NUDT2P50583 147 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 SPSB3Q6PJ21 355 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 DEFB108BQ8NET1 73 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 DNAJC30Q96LL9 226 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 PLEKHA3Q9HB20 300 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 MSL2Q9HCI7 577 aa4.2□□□□□ -1.74
CCDC39-205ENST00000485055 TRAV27A0A087WT01 109 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 OR5AL1P0C617 328 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 HKR1P10072 659 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 CXCL2P19875 107 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 TSPOP30536 169 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 RND2P52198 227 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 SELENOTP62341 195 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 LTC4SQ16873 150 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 ACOT6Q3I5F7 207 aaPredicted RBP4.19□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF684Q5T5D7 378 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 LCE2DQ5TA82 110 aaPredicted RBP4.19□□□□□ -1.74
CCDC39-205ENST00000485055 TBPL2Q6SJ96 375 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF439Q8NDP4 499 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 SGMS2Q8NHU3 365 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 OR2J1Q9GZK6 312 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 C16orf95Q9H693 158 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 HSPB8Q9UJY1 196 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 C5orf49A4QMS7 147 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 DEGS1O15121 323 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 SRSF10O75494 262 aaKnown RBP4.19□□□□□ -1.74
CCDC39-205ENST00000485055 SOX14O95416 240 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 RBP4P02753 201 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 TNFRSF1BP20333 461 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 CCL1P22362 96 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 CD34P28906 385 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 TFPI2P48307 235 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 TNFAIP6P98066 277 aaPredicted RBP4.19□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF154Q13106 437 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 RIGQ13278 110 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 CLINT1Q14677 625 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 CMBLQ96DG6 245 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 SPACA5Q96QH8 159 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 C19orf24Q9BVV8 132 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 TM2D1Q9BX74 207 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 ARMCX1Q9P291 453 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 TNFSF18Q9UNG2 199 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 IER3IP1Q9Y5U9 82 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 POLQO75417 2590 aa4.19□□□□□ -1.74
CCDC39-205ENST00000485055 PLCE1Q9P212 2302 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 IGKV1D-8A0A087WSZ0 117 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 LYRM9A8MSI8 78 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 K7ERU9 68 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 SPI1P17947 270 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 S100A11P31949 105 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 OR12D2P58182 307 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 SLC35A2P78381 396 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 OCIAD2Q56VL3 154 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 FAM162BQ5T6X4 162 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 ZCCHC24Q8N2G6 241 aaKnown RBP4.18□□□□□ -1.74
CCDC39-205ENST00000485055 GVQW1Q8N7I0 195 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 ZDHHC22Q8N966 263 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 UBAC2Q8NBM4 344 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 OR51G1Q8NGK1 321 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 OR1S1Q8NH92 325 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 SFT2D1Q8WV19 159 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 SPTSSAQ969W0 71 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 LPAR5Q9H1C0 372 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 AKIP1Q9NQ31 210 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 ST3GAL6Q9Y274 331 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 MPC1Q9Y5U8 109 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 FAM20BO75063 409 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 RPL7P18124 248 aaKnown RBP4.18□□□□□ -1.74
CCDC39-205ENST00000485055 BCL3P20749 454 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 SRSF3P84103 164 aaKnown RBP4.18□□□□□ -1.74
CCDC39-205ENST00000485055 RPL18AQ02543 176 aaKnown RBP4.18□□□□□ -1.74
CCDC39-205ENST00000485055 BEAN1Q3B7T3 259 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 C11orf53Q8IXP5 236 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 PNLDC1Q8NA58 520 aaKnown RBP4.18□□□□□ -1.74
CCDC39-205ENST00000485055 OR52L1Q8NGH7 329 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 OR1N2Q8NGR9 330 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 ZNF418Q8TF45 676 aaPredicted RBP4.18□□□□□ -1.74
CCDC39-205ENST00000485055 TRUB1Q8WWH5 349 aaKnown RBP4.18□□□□□ -1.74
CCDC39-205ENST00000485055 IL22RA2Q969J5 263 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 SEC22AQ96IW7 307 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 Q9HAA7 133 aa4.18□□□□□ -1.74
CCDC39-205ENST00000485055 F6UZH7 168 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 PATE4P0C8F1 98 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 SULT1A3P0DMM9 295 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 SULT1A4P0DMN0 295 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 IZUMO4Q1ZYL8 232 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 GSG1LQ6UXU4 331 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 Q6ZSV7 163 aa4.17□□□□□ -1.74
CCDC39-205ENST00000485055 MRPL55Q7Z7F7 128 aaKnown RBP4.17□□□□□ -1.74
CCDC39-205ENST00000485055 OR8D4Q8NGM9 314 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms