RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 C15orf32Q32M92 178 aa12.48□□□□□ -0.41
DDR1-246ENST00000485023 CTRB2Q6GPI1 263 aa12.48□□□□□ -0.41
DDR1-246ENST00000485023 ZNF343Q6P1L6 599 aa12.48□□□□□ -0.41
DDR1-246ENST00000485023 H2BFWTQ7Z2G1 175 aa12.48□□□□□ -0.41
DDR1-246ENST00000485023 REC114Q7Z4M0 266 aa12.48□□□□□ -0.41
DDR1-246ENST00000485023 NECAP1Q8NC96 275 aa12.48□□□□□ -0.41
DDR1-246ENST00000485023 TRIM63Q969Q1 353 aa12.48□□□□□ -0.41
DDR1-246ENST00000485023 SEC22AQ96IW7 307 aa12.48□□□□□ -0.41
DDR1-246ENST00000485023 TRBV9A0A0B4J1U6 114 aa12.47□□□□□ -0.41
DDR1-246ENST00000485023 WI2-2373I1.2A0A1W2PRP0 233 aa12.47□□□□□ -0.41
DDR1-246ENST00000485023 C15orf61A6NNL5 157 aa12.47□□□□□ -0.41
DDR1-246ENST00000485023 NDUFB8O95169 186 aa12.47□□□□□ -0.41
DDR1-246ENST00000485023 DHFRP00374 187 aa12.47□□□□□ -0.41
DDR1-246ENST00000485023 CRYGCP07315 174 aa12.47□□□□□ -0.41
DDR1-246ENST00000485023 OR13C7P0DN81 318 aa12.47□□□□□ -0.41
DDR1-246ENST00000485023 MECP2P51608 486 aaKnown RBP12.47□□□□□ -0.41
DDR1-246ENST00000485023 KLF9Q13886 244 aaPredicted RBP12.47□□□□□ -0.41
DDR1-246ENST00000485023 SPANXN2Q5MJ10 180 aa12.47□□□□□ -0.41
DDR1-246ENST00000485023 OR1L8Q8NGR8 309 aa12.47□□□□□ -0.41
DDR1-246ENST00000485023 OR4A16Q8NH70 328 aa12.47□□□□□ -0.41
DDR1-246ENST00000485023 FANCD2OSQ96PS1 177 aa12.47□□□□□ -0.41
DDR1-246ENST00000485023 RTBDNQ9BSG5 229 aaPredicted RBP12.47□□□□□ -0.41
DDR1-246ENST00000485023 C5orf66Q9H5L9 145 aa12.47□□□□□ -0.41
DDR1-246ENST00000485023 FAM212BQ9NTI7 297 aaPredicted RBP12.47□□□□□ -0.41
DDR1-246ENST00000485023 PRNDQ9UKY0 176 aa12.47□□□□□ -0.41
DDR1-246ENST00000485023 TNCP24821 2201 aa12.47□□□□□ -0.41
DDR1-246ENST00000485023 TEX13DA0A0J9YY54 714 aaPredicted RBP12.46□□□□□ -0.41
DDR1-246ENST00000485023 PPP5D1E7EU14 171 aa12.46□□□□□ -0.41
DDR1-246ENST00000485023 IGKV1-5P01602 117 aa12.46□□□□□ -0.41
DDR1-246ENST00000485023 OR5AC1P0C628 307 aa12.46□□□□□ -0.41
DDR1-246ENST00000485023 ZP3P21754 424 aa12.46□□□□□ -0.41
DDR1-246ENST00000485023 PTBP1P26599 531 aaKnown RBP eCLIP12.46□□□□□ -0.41
DDR1-246ENST00000485023 ECI1P42126 302 aa12.46□□□□□ -0.41
DDR1-246ENST00000485023 WT1-ASQ06250 92 aa12.46□□□□□ -0.41
DDR1-246ENST00000485023 HAPLN4Q86UW8 402 aa12.46□□□□□ -0.41
DDR1-246ENST00000485023 TOMM5Q8N4H5 51 aa12.46□□□□□ -0.41
DDR1-246ENST00000485023 OR6Q1Q8NGQ2 317 aa12.46□□□□□ -0.41
DDR1-246ENST00000485023 RNASE11Q8TAA1 199 aaKnown RBP12.46□□□□□ -0.41
DDR1-246ENST00000485023 TSC22D3Q99576 134 aa12.46□□□□□ -0.41
DDR1-246ENST00000485023 NAA60Q9H7X0 242 aa12.46□□□□□ -0.41
DDR1-246ENST00000485023 SCP2D1Q9UJQ7 156 aa12.46□□□□□ -0.41
DDR1-246ENST00000485023 IGLV11-55A0A075B6I3 123 aa12.45□□□□□ -0.42
DDR1-246ENST00000485023 K7EIL1 84 aa12.45□□□□□ -0.42
DDR1-246ENST00000485023 SYNJ2BPP57105 145 aa12.45□□□□□ -0.42
DDR1-246ENST00000485023 SURF2Q15527 256 aaPredicted RBP12.45□□□□□ -0.42
DDR1-246ENST00000485023 RPEL1Q2QD12 228 aa12.45□□□□□ -0.42
DDR1-246ENST00000485023 SPINK9Q5DT21 86 aa12.45□□□□□ -0.42
DDR1-246ENST00000485023 LSM10Q969L4 123 aaKnown RBP12.45□□□□□ -0.42
DDR1-246ENST00000485023 PRR25Q96S07 402 aa12.45□□□□□ -0.42
DDR1-246ENST00000485023 NDUFA4L2Q9NRX3 87 aa12.45□□□□□ -0.42
DDR1-246ENST00000485023 TMEM14BQ9NUH8 114 aa12.45□□□□□ -0.42
DDR1-246ENST00000485023 SLC2A8Q9NY64 477 aa12.45□□□□□ -0.42
DDR1-246ENST00000485023 PRR13Q9NZ81 148 aa12.45□□□□□ -0.42
DDR1-246ENST00000485023 GPR132Q9UNW8 380 aa12.45□□□□□ -0.42
DDR1-246ENST00000485023 DMRT1Q9Y5R6 373 aa12.45□□□□□ -0.42
DDR1-246ENST00000485023 MFSD2BA6NFX1 497 aa12.44□□□□□ -0.42
DDR1-246ENST00000485023 BMPR1BO00238 502 aa12.44□□□□□ -0.42
DDR1-246ENST00000485023 HLA-AP01891 365 aaKnown RBP12.44□□□□□ -0.42
DDR1-246ENST00000485023 FGF2P09038 288 aa12.44□□□□□ -0.42
DDR1-246ENST00000485023 UCP1P25874 307 aa12.44□□□□□ -0.42
DDR1-246ENST00000485023 FAUP35544 74 aaKnown RBP12.44□□□□□ -0.42
DDR1-246ENST00000485023 ZNF57Q68EA5 555 aaPredicted RBP12.44□□□□□ -0.42
DDR1-246ENST00000485023 THOC7Q6I9Y2 204 aaKnown RBP12.44□□□□□ -0.42
DDR1-246ENST00000485023 GDPD1Q8N9F7 314 aa12.44□□□□□ -0.42
DDR1-246ENST00000485023 SRSF8Q9BRL6 282 aaKnown RBP12.44□□□□□ -0.42
DDR1-246ENST00000485023 SRRQ9GZT4 340 aa12.44□□□□□ -0.42
DDR1-246ENST00000485023 ZC4H2Q9NQZ6 224 aa12.44□□□□□ -0.42
DDR1-246ENST00000485023 NDUFA13Q9P0J0 144 aa12.44□□□□□ -0.42
DDR1-246ENST00000485023 TGP01266 2768 aa12.44□□□□□ -0.42
DDR1-246ENST00000485023 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.43□□□□□ -0.42
DDR1-246ENST00000485023 A0A0G2JRQ6 117 aa12.43□□□□□ -0.42
DDR1-246ENST00000485023 CRYM-AS1A6NIL9 109 aa12.43□□□□□ -0.42
DDR1-246ENST00000485023 LY86O95711 162 aa12.43□□□□□ -0.42
DDR1-246ENST00000485023 HIST1H1BP16401 226 aaKnown RBP12.43□□□□□ -0.42
DDR1-246ENST00000485023 ETV6P41212 452 aa12.43□□□□□ -0.42
DDR1-246ENST00000485023 AP3S2P59780 193 aa12.43□□□□□ -0.42
DDR1-246ENST00000485023 SLC25A24Q6NUK1 477 aa12.43□□□□□ -0.42
DDR1-246ENST00000485023 ACSM6Q6P461 480 aa12.43□□□□□ -0.42
DDR1-246ENST00000485023 CLEC19AQ6UXS0 136 aa12.43□□□□□ -0.42
DDR1-246ENST00000485023 OR5B3Q8NH48 314 aa12.43□□□□□ -0.42
DDR1-246ENST00000485023 EEF1AKMT3Q96AZ1 226 aa12.43□□□□□ -0.42
DDR1-246ENST00000485023 CCDC140Q96MF4 163 aa12.43□□□□□ -0.42
DDR1-246ENST00000485023 TMEM56Q96MV1 263 aa12.43□□□□□ -0.42
DDR1-246ENST00000485023 OR4C12Q96R67 309 aa12.43□□□□□ -0.42
DDR1-246ENST00000485023 TMEM222Q9H0R3 208 aa12.43□□□□□ -0.42
DDR1-246ENST00000485023 FKBP11Q9NYL4 201 aa12.43□□□□□ -0.42
DDR1-246ENST00000485023 IGHV3-21A0A0B4J1V1 117 aa12.42□□□□□ -0.42
DDR1-246ENST00000485023 LINC00854A0A1B0GVQ3 168 aa12.42□□□□□ -0.42
DDR1-246ENST00000485023 ATG12O94817 140 aa12.42□□□□□ -0.42
DDR1-246ENST00000485023 AKR1C4P17516 323 aa12.42□□□□□ -0.42
DDR1-246ENST00000485023 INPP1P49441 399 aa12.42□□□□□ -0.42
DDR1-246ENST00000485023 KLF5Q13887 457 aaPredicted RBP12.42□□□□□ -0.42
DDR1-246ENST00000485023 DEFB121Q5J5C9 76 aa12.42□□□□□ -0.42
DDR1-246ENST00000485023 TRIQKQ629K1 86 aa12.42□□□□□ -0.42
DDR1-246ENST00000485023 HSD17B13Q7Z5P4 300 aaPredicted RBP12.42□□□□□ -0.42
DDR1-246ENST00000485023 TMED4Q7Z7H5 227 aa12.42□□□□□ -0.42
DDR1-246ENST00000485023 ZNF429Q86V71 674 aa12.42□□□□□ -0.42
DDR1-246ENST00000485023 CADM3Q8N126 398 aa12.42□□□□□ -0.42
DDR1-246ENST00000485023 OR9G4Q8NGQ1 327 aa12.42□□□□□ -0.42
DDR1-246ENST00000485023 LHFPL5Q8TAF8 219 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms