RNA–Protein interactions for RNA: ENST00000484874.2

CNKSR1-208, Transcript of connector enhancer of kinase suppressor of Ras 1, human

TSL 3

Gene CNKSR1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNKSR1-208	ENST00000484874	PIGBOS1	A0A0B4J2F0	54 aa		14.02	□□□□□ -0.17
CNKSR1-208	ENST00000484874	C15orf61	A6NNL5	157 aa		14.02	□□□□□ -0.17
CNKSR1-208	ENST00000484874	DHFR	P00374	187 aa		14.02	□□□□□ -0.17
CNKSR1-208	ENST00000484874	LGALS1	P09382	135 aa	Known RBP	14.02	□□□□□ -0.17
CNKSR1-208	ENST00000484874	AKR1C4	P17516	323 aa		14.02	□□□□□ -0.17
CNKSR1-208	ENST00000484874	FHL3	Q13643	280 aa		14.02	□□□□□ -0.17
CNKSR1-208	ENST00000484874	TMEM187	Q14656	261 aa		14.02	□□□□□ -0.17
CNKSR1-208	ENST00000484874	ZNF429	Q86V71	674 aa		14.02	□□□□□ -0.17
CNKSR1-208	ENST00000484874	MRPL41	Q8IXM3	137 aa	Known RBP	14.02	□□□□□ -0.17
CNKSR1-208	ENST00000484874	SELENOH	Q8IZQ5	122 aa	Known RBP	14.02	□□□□□ -0.17
CNKSR1-208	ENST00000484874	RBPMS	Q93062	196 aa	Known RBP	14.02	□□□□□ -0.17
CNKSR1-208	ENST00000484874	IL22RA2	Q969J5	263 aa		14.02	□□□□□ -0.17
CNKSR1-208	ENST00000484874	RRNAD1	Q96FB5	475 aa	Known RBP	14.02	□□□□□ -0.17
CNKSR1-208	ENST00000484874	NSG2	Q9Y328	171 aa		14.02	□□□□□ -0.17
CNKSR1-208	ENST00000484874	C13orf42	A0A1B0GVH6	325 aa		14.01	□□□□□ -0.17
CNKSR1-208	ENST00000484874	IGLC7	A0M8Q6	106 aa		14.01	□□□□□ -0.17
CNKSR1-208	ENST00000484874	FAM223B	A6NKX1	122 aa		14.01	□□□□□ -0.17
CNKSR1-208	ENST00000484874	PLA2G10	O15496	165 aa		14.01	□□□□□ -0.17
CNKSR1-208	ENST00000484874	CD33	P20138	364 aa		14.01	□□□□□ -0.17
CNKSR1-208	ENST00000484874	HSPE1	P61604	102 aa	Known RBP	14.01	□□□□□ -0.17
CNKSR1-208	ENST00000484874	SUPT4H1	P63272	117 aa	Known RBP	14.01	□□□□□ -0.17
CNKSR1-208	ENST00000484874	FAM223A	Q8IWN6	122 aa		14.01	□□□□□ -0.17
CNKSR1-208	ENST00000484874	NECAP1	Q8NC96	275 aa		14.01	□□□□□ -0.17
CNKSR1-208	ENST00000484874	OR11H1	Q8NG94	326 aa		14.01	□□□□□ -0.17
CNKSR1-208	ENST00000484874	OR1N2	Q8NGR9	330 aa		14.01	□□□□□ -0.17
CNKSR1-208	ENST00000484874	FBN3	Q75N90	2809 aa		14	□□□□□ -0.17
CNKSR1-208	ENST00000484874		A0A0B4J293	547 aa		14	□□□□□ -0.17
CNKSR1-208	ENST00000484874	NDUFB6	O95139	128 aa		14	□□□□□ -0.17
CNKSR1-208	ENST00000484874	HSPB1	P04792	205 aa	Known RBP	14	□□□□□ -0.17
CNKSR1-208	ENST00000484874	ANXA3	P12429	323 aa		14	□□□□□ -0.17
CNKSR1-208	ENST00000484874	AREG	P15514	252 aa		14	□□□□□ -0.17
CNKSR1-208	ENST00000484874	HIST1H1B	P16401	226 aa	Known RBP	14	□□□□□ -0.17
CNKSR1-208	ENST00000484874	CCR6	P51684	374 aa		14	□□□□□ -0.17
CNKSR1-208	ENST00000484874	AKR1C2	P52895	323 aa		14	□□□□□ -0.17
CNKSR1-208	ENST00000484874	UBE2M	P61081	183 aa	Known RBP	14	□□□□□ -0.17
CNKSR1-208	ENST00000484874	ZNF616	Q08AN1	781 aa		14	□□□□□ -0.17
CNKSR1-208	ENST00000484874	ZNF343	Q6P1L6	599 aa		14	□□□□□ -0.17
CNKSR1-208	ENST00000484874	LHFPL5	Q8TAF8	219 aa		14	□□□□□ -0.17
CNKSR1-208	ENST00000484874	LSM10	Q969L4	123 aa	Known RBP	14	□□□□□ -0.17
CNKSR1-208	ENST00000484874	FANCD2OS	Q96PS1	177 aa		14	□□□□□ -0.17
CNKSR1-208	ENST00000484874	DBX1	A6NMT0	343 aa		13.99	□□□□□ -0.17
CNKSR1-208	ENST00000484874	DUS4L	O95620	317 aa	Known RBP	13.99	□□□□□ -0.17
CNKSR1-208	ENST00000484874	SRPX	P78539	464 aa		13.99	□□□□□ -0.17
CNKSR1-208	ENST00000484874	RHOG	P84095	191 aa		13.99	□□□□□ -0.17
CNKSR1-208	ENST00000484874	ZNF846	Q147U1	533 aa		13.99	□□□□□ -0.17
CNKSR1-208	ENST00000484874	DEFB136	Q30KP8	78 aa		13.99	□□□□□ -0.17
CNKSR1-208	ENST00000484874	FAM209B	Q5JX69	171 aa		13.99	□□□□□ -0.17
CNKSR1-208	ENST00000484874	OR10W1	Q8NGF6	305 aa		13.99	□□□□□ -0.17
CNKSR1-208	ENST00000484874	DPF1	Q92782	380 aa		13.99	□□□□□ -0.17
CNKSR1-208	ENST00000484874	RCC1L	Q96I51	464 aa	Known RBP	13.99	□□□□□ -0.17
CNKSR1-208	ENST00000484874	WDR12	Q9GZL7	423 aa	Known RBP	13.99	□□□□□ -0.17
CNKSR1-208	ENST00000484874	NBEAL1	Q6ZS30	2694 aa		13.99	□□□□□ -0.17
CNKSR1-208	ENST00000484874	LINC00854	A0A1B0GVQ3	168 aa		13.98	□□□□□ -0.17
CNKSR1-208	ENST00000484874	RBMXL2	O75526	392 aa	Known RBP	13.98	□□□□□ -0.17
CNKSR1-208	ENST00000484874	OR8U8	P0C7N1	319 aa		13.98	□□□□□ -0.17
CNKSR1-208	ENST00000484874	OR13C7	P0DN81	318 aa		13.98	□□□□□ -0.17
CNKSR1-208	ENST00000484874	BTC	P35070	178 aa		13.98	□□□□□ -0.17
CNKSR1-208	ENST00000484874	ATP5G2	Q06055	141 aa		13.98	□□□□□ -0.17
CNKSR1-208	ENST00000484874	WT1-AS	Q06250	92 aa		13.98	□□□□□ -0.17
CNKSR1-208	ENST00000484874	AARD	Q4LEZ3	155 aa		13.98	□□□□□ -0.17
CNKSR1-208	ENST00000484874	TMEM268	Q5VZI3	342 aa		13.98	□□□□□ -0.17
CNKSR1-208	ENST00000484874	TMED4	Q7Z7H5	227 aa		13.98	□□□□□ -0.17
CNKSR1-208	ENST00000484874	CENPS	Q8N2Z9	138 aa		13.98	□□□□□ -0.17
CNKSR1-208	ENST00000484874	DUX3	Q96PT4	197 aa		13.98	□□□□□ -0.17
CNKSR1-208	ENST00000484874	OR5B12	Q96R08	314 aa		13.98	□□□□□ -0.17
CNKSR1-208	ENST00000484874	RANGRF	Q9HD47	186 aa	Predicted RBP	13.98	□□□□□ -0.17
CNKSR1-208	ENST00000484874	CACFD1	Q9UGQ2	172 aa		13.98	□□□□□ -0.17
CNKSR1-208	ENST00000484874	NOTCH3	Q9UM47	2321 aa		13.98	□□□□□ -0.17
CNKSR1-208	ENST00000484874	CMYA5	Q8N3K9	4069 aa		13.97	□□□□□ -0.17
CNKSR1-208	ENST00000484874	INS-IGF2	F8WCM5	200 aa		13.97	□□□□□ -0.17
CNKSR1-208	ENST00000484874	LINC01619	G3V211	115 aa		13.97	□□□□□ -0.17
CNKSR1-208	ENST00000484874	CYB5B	O43169	146 aa		13.97	□□□□□ -0.17
CNKSR1-208	ENST00000484874	LYRM1	O43325	122 aa		13.97	□□□□□ -0.17
CNKSR1-208	ENST00000484874	IGHV3-11	P01762	117 aa		13.97	□□□□□ -0.17
CNKSR1-208	ENST00000484874	PRH1	P02810	166 aa		13.97	□□□□□ -0.17
CNKSR1-208	ENST00000484874	DEFA4	P12838	97 aa		13.97	□□□□□ -0.17
CNKSR1-208	ENST00000484874	PRCD	Q00LT1	54 aa		13.97	□□□□□ -0.17
CNKSR1-208	ENST00000484874	IZUMO4	Q1ZYL8	232 aa		13.97	□□□□□ -0.17
CNKSR1-208	ENST00000484874	SAMD5	Q5TGI4	173 aa		13.97	□□□□□ -0.17
CNKSR1-208	ENST00000484874	LGI3	Q8N145	548 aa		13.97	□□□□□ -0.17
CNKSR1-208	ENST00000484874	LRTM2	Q8N967	370 aa		13.97	□□□□□ -0.17
CNKSR1-208	ENST00000484874	OR1L6	Q8NGR2	347 aa		13.97	□□□□□ -0.17
CNKSR1-208	ENST00000484874	MCRIP2	Q9BUT9	160 aa	Known RBP	13.97	□□□□□ -0.17
CNKSR1-208	ENST00000484874	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.97	□□□□□ -0.17
CNKSR1-208	ENST00000484874	IGLV11-55	A0A075B6I3	123 aa		13.96	□□□□□ -0.17
CNKSR1-208	ENST00000484874		A0A0B4J2A0	478 aa		13.96	□□□□□ -0.17
CNKSR1-208	ENST00000484874		A0A0G2JRQ6	117 aa		13.96	□□□□□ -0.17
CNKSR1-208	ENST00000484874	DUXB	A0A1W2PPF3	345 aa		13.96	□□□□□ -0.17
CNKSR1-208	ENST00000484874	SFT2D2	O95562	160 aa		13.96	□□□□□ -0.17
CNKSR1-208	ENST00000484874		Q6ZRM9	215 aa		13.96	□□□□□ -0.17
CNKSR1-208	ENST00000484874	OR52E5	Q8NH55	327 aa		13.96	□□□□□ -0.17
CNKSR1-208	ENST00000484874	RNASE11	Q8TAA1	199 aa	Known RBP	13.96	□□□□□ -0.17
CNKSR1-208	ENST00000484874	GPR146	Q96CH1	333 aa		13.96	□□□□□ -0.17
CNKSR1-208	ENST00000484874	HINT2	Q9BX68	163 aa		13.96	□□□□□ -0.17
CNKSR1-208	ENST00000484874	ALX4	Q9H161	411 aa	Predicted RBP	13.96	□□□□□ -0.17
CNKSR1-208	ENST00000484874	THYN1	Q9P016	225 aa		13.96	□□□□□ -0.17
CNKSR1-208	ENST00000484874	PEF1	Q9UBV8	284 aa	Known RBP	13.96	□□□□□ -0.17
CNKSR1-208	ENST00000484874	SHPK	Q9UHJ6	478 aa		13.96	□□□□□ -0.17
CNKSR1-208	ENST00000484874	FBXL7	Q9UJT9	491 aa		13.96	□□□□□ -0.17
CNKSR1-208	ENST00000484874	ST8SIA3	O43173	380 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms