RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 hADV38S2A0JD32 116 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 FNDC10F2Z333 226 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 C3orf84H3BNL1 204 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 FAAHO00519 579 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 PIRO00625 290 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 OR7C1O76099 320 aaPredicted RBP1.68□□□□□ -2.14
SMC4-215ENST00000484799 CNIH1O95406 144 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 CRYZL1O95825 349 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 SERPINA1P01009 418 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 IFNA10P01566 189 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 PRM2P04554 102 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 SERPINA7P05543 415 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 RBP1P09455 135 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 MSNP26038 577 aaKnown RBP1.68□□□□□ -2.14
SMC4-215ENST00000484799 RELAQ04206 551 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 RPL18Q07020 188 aaKnown RBP1.68□□□□□ -2.14
SMC4-215ENST00000484799 FOXF1Q12946 379 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 SS18Q15532 418 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 KCNJ8Q15842 424 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 IBA57Q5T440 356 aaKnown RBP1.68□□□□□ -2.14
SMC4-215ENST00000484799 C9orf64Q5T6V5 341 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 NIPSNAP1Q9BPW8 284 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 TMEM147Q9BVK8 224 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 FBXL12Q9NXK8 326 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 RTL1A6NKG5 1358 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 RALGAPA2Q2PPJ7 1873 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 SCN9AQ15858 1988 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 TRAV7A0A075B6U4 112 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 DPRXA6NFQ7 191 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 PDE6DO43924 150 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 IGHV3-7P01780 117 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 CST2P09228 141 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 SULT1A3P0DMM9 295 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 SULT1A4P0DMN0 295 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 CCL5P13501 91 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 CSRP1P21291 193 aaKnown RBP1.67□□□□□ -2.14
SMC4-215ENST00000484799 HIST1H2BOP23527 126 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 HIST1H2BBP33778 126 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 MAGEA12P43365 314 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 HIST1H2BDP58876 126 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 RAB14P61106 215 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 HIST1H2BCP62807 126 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 ERHP84090 104 aaKnown RBP1.67□□□□□ -2.14
SMC4-215ENST00000484799 HIST2H2BEQ16778 126 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 ZNF181Q2M3W8 571 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.67□□□□□ -2.14
SMC4-215ENST00000484799 TEX36Q5VZQ5 186 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 ZNF705AQ6ZN79 300 aaPredicted RBP1.67□□□□□ -2.14
SMC4-215ENST00000484799 RPP25LQ8N5L8 163 aaKnown RBP1.67□□□□□ -2.14
SMC4-215ENST00000484799 GDPD1Q8N9F7 314 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 OR51A2Q8NGJ7 313 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 CDC26Q8NHZ8 85 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 HIST1H2BHQ93079 126 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 TOMM6Q96B49 74 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 IMMP2LQ96T52 175 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 SIGMAR1Q99720 223 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 HIST1H2BNQ99877 126 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 HIST1H2BMQ99879 126 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 CISHQ9NSE2 258 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 IDI2-AS1Q9NZ38 188 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 PRO2289Q9P1D8 64 aa1.67□□□□□ -2.14
SMC4-215ENST00000484799 CCDC144AA2RUR9 1427 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 BAHCC1Q9P281 2608 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 TRAV9-1A0A075B6T8 112 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 TRAV38-1A0A0B4J264 116 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 EXOC1LA0A1B0GW35 172 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 FABP5P3A8MUU1 101 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 H7C2G1 150 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 SLC22A1O15245 554 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 LGALS1P09382 135 aaKnown RBP1.66□□□□□ -2.14
SMC4-215ENST00000484799 S100A5P33763 92 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 CCR2P41597 374 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 HBA1P69905 142 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 GLO1Q04760 184 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 SPANXN3Q5MJ09 141 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 TMEM42Q69YG0 159 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 Q6ZTI0 123 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 KRT222Q8N1A0 295 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 OR4X2Q8NGF9 303 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 KLK6Q92876 244 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 ERMAPQ96PL5 475 aaPredicted RBP1.66□□□□□ -2.14
SMC4-215ENST00000484799 DOHHQ9BU89 302 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 CCDC90BQ9GZT6 254 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 STOML2Q9UJZ1 356 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 RBM7Q9Y580 266 aaKnown RBP1.66□□□□□ -2.14
SMC4-215ENST00000484799 PCF11O94913 1555 aaKnown RBP1.66□□□□□ -2.14
SMC4-215ENST00000484799 ADAMTS7Q9UKP4 1686 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 DOCK5Q9H7D0 1870 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 PTPRSQ13332 1948 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 KIF13BQ9NQT8 1826 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 CAMSAP1Q5T5Y3 1602 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 ZNF532Q9HCE3 1301 aa1.66□□□□□ -2.14
SMC4-215ENST00000484799 NEO1Q92859 1461 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 FAM236DA0A1B0GTK5 79 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 ARRDC5A6NEK1 342 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 GGT3PA6NGU5 568 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 H3BT86 120 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 SERPINE1P05121 402 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 TFPTP0C1Z6 253 aa1.65□□□□□ -2.15
SMC4-215ENST00000484799 SMIM10L2AP0DMW4 78 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms