RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 FAM223BA6NKX1 122 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 C15orf61A6NNL5 157 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 SEC14L6B5MCN3 397 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 IGKV1-5P01602 117 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 TRBV12-3P01733 135 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 CRYGCP07315 174 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 OR5AC1P0C628 307 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 TRAPPC2P0DI81 140 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 TRAPPC2BP0DI82 140 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 DEFA4P12838 97 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 CTRB1P17538 263 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 AKR1C2P52895 323 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 ATP5G2Q06055 141 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 EXOSC2Q13868 293 aaKnown RBP10.32□□□□□ -0.76
SSR1-208ENST00000483409 ZNF57Q68EA5 555 aaPredicted RBP10.32□□□□□ -0.76
SSR1-208ENST00000483409 CTRB2Q6GPI1 263 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 ZNF343Q6P1L6 599 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 FAM223AQ8IWN6 122 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 GDPD1Q8N9F7 314 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 NECAP1Q8NC96 275 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 OR4A16Q8NH70 328 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 DLX4Q92988 240 aaPredicted RBP10.32□□□□□ -0.76
SSR1-208ENST00000483409 TSC22D3Q99576 134 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 GPR61Q9BZJ8 451 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 NAA60Q9H7X0 242 aa10.32□□□□□ -0.76
SSR1-208ENST00000483409 CRYM-AS1A6NIL9 109 aa10.31□□□□□ -0.76
SSR1-208ENST00000483409 WIPF1O43516 503 aa10.31□□□□□ -0.76
SSR1-208ENST00000483409 DHFRP00374 187 aa10.31□□□□□ -0.76
SSR1-208ENST00000483409 UCP1P25874 307 aa10.31□□□□□ -0.76
SSR1-208ENST00000483409 BAK1Q16611 211 aa10.31□□□□□ -0.76
SSR1-208ENST00000483409 C15orf32Q32M92 178 aa10.31□□□□□ -0.76
SSR1-208ENST00000483409 TRIQKQ629K1 86 aa10.31□□□□□ -0.76
SSR1-208ENST00000483409 THOC7Q6I9Y2 204 aaKnown RBP10.31□□□□□ -0.76
SSR1-208ENST00000483409 FANCD2OSQ96PS1 177 aa10.31□□□□□ -0.76
SSR1-208ENST00000483409 SRSF8Q9BRL6 282 aaKnown RBP10.31□□□□□ -0.76
SSR1-208ENST00000483409 RANGRFQ9HD47 186 aaPredicted RBP10.31□□□□□ -0.76
SSR1-208ENST00000483409 NDUFA4L2Q9NRX3 87 aa10.31□□□□□ -0.76
SSR1-208ENST00000483409 TMEM14BQ9NUH8 114 aa10.31□□□□□ -0.76
SSR1-208ENST00000483409 FKBP11Q9NYL4 201 aa10.31□□□□□ -0.76
SSR1-208ENST00000483409 FBXL7Q9UJT9 491 aa10.31□□□□□ -0.76
SSR1-208ENST00000483409 PRKDCP78527 4128 aaKnown RBP10.31□□□□□ -0.76
SSR1-208ENST00000483409 OVOL1O14753 267 aa10.3□□□□□ -0.76
SSR1-208ENST00000483409 B3GALNT1O75752 331 aa10.3□□□□□ -0.76
SSR1-208ENST00000483409 NDUFB8O95169 186 aa10.3□□□□□ -0.76
SSR1-208ENST00000483409 OR13C7P0DN81 318 aa10.3□□□□□ -0.76
SSR1-208ENST00000483409 INPP1P49441 399 aa10.3□□□□□ -0.76
SSR1-208ENST00000483409 MECP2P51608 486 aaKnown RBP10.3□□□□□ -0.76
SSR1-208ENST00000483409 KRTAP10-11P60412 298 aa10.3□□□□□ -0.76
SSR1-208ENST00000483409 WT1-ASQ06250 92 aa10.3□□□□□ -0.76
SSR1-208ENST00000483409 PDLIM3Q53GG5 364 aaPredicted RBP10.3□□□□□ -0.76
SSR1-208ENST00000483409 C9orf66Q5T8R8 295 aa10.3□□□□□ -0.76
SSR1-208ENST00000483409 OR5B3Q8NH48 314 aa10.3□□□□□ -0.76
SSR1-208ENST00000483409 RNASE11Q8TAA1 199 aaKnown RBP10.3□□□□□ -0.76
SSR1-208ENST00000483409 LHFPL5Q8TAF8 219 aa10.3□□□□□ -0.76
SSR1-208ENST00000483409 LSM10Q969L4 123 aaKnown RBP10.3□□□□□ -0.76
SSR1-208ENST00000483409 TMEM230Q96A57 120 aa10.3□□□□□ -0.76
SSR1-208ENST00000483409 SCGB3A2Q96PL1 93 aa10.3□□□□□ -0.76
SSR1-208ENST00000483409 SDHCQ99643 169 aaPredicted RBP10.3□□□□□ -0.76
SSR1-208ENST00000483409 TMEM222Q9H0R3 208 aa10.3□□□□□ -0.76
SSR1-208ENST00000483409 AURKAIP1Q9NWT8 199 aaPredicted RBP10.3□□□□□ -0.76
SSR1-208ENST00000483409 PEF1Q9UBV8 284 aaKnown RBP10.3□□□□□ -0.76
SSR1-208ENST00000483409 S4R3C0 116 aa10.3□□□□□ -0.76
SSR1-208ENST00000483409 IGLV11-55A0A075B6I3 123 aa10.29□□□□□ -0.76
SSR1-208ENST00000483409 A0A0G2JRQ6 117 aa10.29□□□□□ -0.76
SSR1-208ENST00000483409 LINC00854A0A1B0GVQ3 168 aa10.29□□□□□ -0.76
SSR1-208ENST00000483409 ATG12O94817 140 aa10.29□□□□□ -0.76
SSR1-208ENST00000483409 IGHV3-23P01764 117 aa10.29□□□□□ -0.76
SSR1-208ENST00000483409 P0C879 139 aa10.29□□□□□ -0.76
SSR1-208ENST00000483409 AKR1C4P17516 323 aa10.29□□□□□ -0.76
SSR1-208ENST00000483409 ZP3P21754 424 aa10.29□□□□□ -0.76
SSR1-208ENST00000483409 SPINK9Q5DT21 86 aa10.29□□□□□ -0.76
SSR1-208ENST00000483409 SGPP2Q8IWX5 399 aa10.29□□□□□ -0.76
SSR1-208ENST00000483409 GLYATL2Q8WU03 294 aa10.29□□□□□ -0.76
SSR1-208ENST00000483409 PRR13Q9NZ81 148 aa10.29□□□□□ -0.76
SSR1-208ENST00000483409 DMRT1Q9Y5R6 373 aa10.29□□□□□ -0.76
SSR1-208ENST00000483409 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.28□□□□□ -0.76
SSR1-208ENST00000483409 A6NHS1 94 aa10.28□□□□□ -0.76
SSR1-208ENST00000483409 PPP5D1E7EU14 171 aa10.28□□□□□ -0.76
SSR1-208ENST00000483409 SAP30O75446 220 aa10.28□□□□□ -0.76
SSR1-208ENST00000483409 CDS2O95674 445 aa10.28□□□□□ -0.76
SSR1-208ENST00000483409 HIST1H1BP16401 226 aaKnown RBP10.28□□□□□ -0.76
SSR1-208ENST00000483409 DHODHQ02127 395 aa10.28□□□□□ -0.76
SSR1-208ENST00000483409 EGFEM1PQ0D2K5 195 aa10.28□□□□□ -0.76
SSR1-208ENST00000483409 RPEL1Q2QD12 228 aa10.28□□□□□ -0.76
SSR1-208ENST00000483409 CNPY1Q3B7I2 92 aa10.28□□□□□ -0.76
SSR1-208ENST00000483409 HSD17B13Q7Z5P4 300 aaPredicted RBP10.28□□□□□ -0.76
SSR1-208ENST00000483409 TMED4Q7Z7H5 227 aa10.28□□□□□ -0.76
SSR1-208ENST00000483409 SELENOHQ8IZQ5 122 aaKnown RBP10.28□□□□□ -0.76
SSR1-208ENST00000483409 DEDD2Q8WXF8 326 aa10.28□□□□□ -0.76
SSR1-208ENST00000483409 RBPMSQ93062 196 aaKnown RBP10.28□□□□□ -0.76
SSR1-208ENST00000483409 RRNAD1Q96FB5 475 aaKnown RBP10.28□□□□□ -0.76
SSR1-208ENST00000483409 TMEM56Q96MV1 263 aa10.28□□□□□ -0.76
SSR1-208ENST00000483409 A0A0B4J293 547 aa10.27□□□□□ -0.77
SSR1-208ENST00000483409 MFSD2BA6NFX1 497 aa10.27□□□□□ -0.77
SSR1-208ENST00000483409 BMPR1BO00238 502 aa10.27□□□□□ -0.77
SSR1-208ENST00000483409 ST8SIA3O43173 380 aa10.27□□□□□ -0.77
SSR1-208ENST00000483409 SYNJ2BPP57105 145 aa10.27□□□□□ -0.77
SSR1-208ENST00000483409 HSPE1P61604 102 aaKnown RBP10.27□□□□□ -0.77
SSR1-208ENST00000483409 SUPT4H1P63272 117 aaKnown RBP10.27□□□□□ -0.77
SSR1-208ENST00000483409 PRCDQ00LT1 54 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms