RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 DHFRP00374 187 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 PRH1P02810 166 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 REG1AP05451 166 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 OR5AC1P0C628 307 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 TRAPPC2P0DI81 140 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 TRAPPC2BP0DI82 140 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 AREGP15514 252 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 UCP1P25874 307 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 PSMB6P28072 239 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 RHOGP84095 191 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 ZNF45Q02386 682 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 FHL3Q13643 280 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 BAK1Q16611 211 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 CNPY1Q3B7I2 92 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 SAMD5Q5TGI4 173 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 THOC7Q6I9Y2 204 aaKnown RBP6.79□□□□□ -1.32
SNX4-205ENST00000482965 SGPP2Q8IWX5 399 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 OR4A16Q8NH70 328 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 RNASE11Q8TAA1 199 aaKnown RBP6.79□□□□□ -1.32
SNX4-205ENST00000482965 USMG5Q96IX5 58 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 SRSF8Q9BRL6 282 aaKnown RBP6.79□□□□□ -1.32
SNX4-205ENST00000482965 MCRIP2Q9BUT9 160 aaKnown RBP6.79□□□□□ -1.32
SNX4-205ENST00000482965 GPR61Q9BZJ8 451 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 FKBP11Q9NYL4 201 aa6.79□□□□□ -1.32
SNX4-205ENST00000482965 NOTCH1P46531 2555 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 IGHV4OR15-8A0A075B7B6 117 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 A0A087WW49 117 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 TRBV9A0A0B4J1U6 114 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 LINC00854A0A1B0GVQ3 168 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 IGLC7A0M8Q6 106 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 ANKRD34BA5PLL1 514 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 FAM223BA6NKX1 122 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 C15orf61A6NNL5 157 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 OR2J3O76001 311 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 IGKV1-5P01602 117 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 HSPB1P04792 205 aaKnown RBP6.78□□□□□ -1.32
SNX4-205ENST00000482965 CRYGCP07315 174 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 DEFA4P12838 97 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 AKR1C4P17516 323 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 CTRB1P17538 263 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 MECP2P51608 486 aaKnown RBP6.78□□□□□ -1.32
SNX4-205ENST00000482965 DEFA6Q01524 100 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 DHODHQ02127 395 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 ATP5G2Q06055 141 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 CTRB2Q6GPI1 263 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 C19orf35Q6ZS72 473 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 HSD17B13Q7Z5P4 300 aaPredicted RBP6.78□□□□□ -1.32
SNX4-205ENST00000482965 FAM223AQ8IWN6 122 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 NECAP1Q8NC96 275 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 OR5B3Q8NH48 314 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 LSM10Q969L4 123 aaKnown RBP6.78□□□□□ -1.32
SNX4-205ENST00000482965 TMEM230Q96A57 120 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 RRNAD1Q96FB5 475 aaKnown RBP6.78□□□□□ -1.32
SNX4-205ENST00000482965 SDHCQ99643 169 aaPredicted RBP6.78□□□□□ -1.32
SNX4-205ENST00000482965 TMEM222Q9H0R3 208 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 AKIP1Q9NQ31 210 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 BATF3Q9NR55 127 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 NDUFA4L2Q9NRX3 87 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 TMEM14BQ9NUH8 114 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 KCNIP3Q9Y2W7 256 aa6.78□□□□□ -1.32
SNX4-205ENST00000482965 NAP1L6A6NFF2 107 aa6.77□□□□□ -1.33
SNX4-205ENST00000482965 DBX1A6NMT0 343 aa6.77□□□□□ -1.33
SNX4-205ENST00000482965 CENPXA8MT69 81 aa6.77□□□□□ -1.33
SNX4-205ENST00000482965 CYB5BO43169 146 aa6.77□□□□□ -1.33
SNX4-205ENST00000482965 CDS2O95674 445 aa6.77□□□□□ -1.33
SNX4-205ENST00000482965 OR13C7P0DN81 318 aa6.77□□□□□ -1.33
SNX4-205ENST00000482965 IL7P13232 177 aa6.77□□□□□ -1.33
SNX4-205ENST00000482965 HIST1H1BP16401 226 aaKnown RBP6.77□□□□□ -1.33
SNX4-205ENST00000482965 SLURP1P55000 103 aa6.77□□□□□ -1.33
SNX4-205ENST00000482965 EXOSC2Q13868 293 aaKnown RBP6.77□□□□□ -1.33
SNX4-205ENST00000482965 IZUMO4Q1ZYL8 232 aa6.77□□□□□ -1.33
SNX4-205ENST00000482965 C15orf32Q32M92 178 aa6.77□□□□□ -1.33
SNX4-205ENST00000482965 BEAN1Q3B7T3 259 aa6.77□□□□□ -1.33
SNX4-205ENST00000482965 ZNF343Q6P1L6 599 aa6.77□□□□□ -1.33
SNX4-205ENST00000482965 TMED4Q7Z7H5 227 aa6.77□□□□□ -1.33
SNX4-205ENST00000482965 OR10W1Q8NGF6 305 aa6.77□□□□□ -1.33
SNX4-205ENST00000482965 GLYATL2Q8WU03 294 aa6.77□□□□□ -1.33
SNX4-205ENST00000482965 DCUN1D4Q92564 292 aa6.77□□□□□ -1.33
SNX4-205ENST00000482965 RBPMSQ93062 196 aaKnown RBP6.77□□□□□ -1.33
SNX4-205ENST00000482965 TMEM56Q96MV1 263 aa6.77□□□□□ -1.33
SNX4-205ENST00000482965 SLC25A21Q9BQT8 299 aaPredicted RBP6.77□□□□□ -1.33
SNX4-205ENST00000482965 RANGRFQ9HD47 186 aaPredicted RBP6.77□□□□□ -1.33
SNX4-205ENST00000482965 PEF1Q9UBV8 284 aaKnown RBP6.77□□□□□ -1.33
SNX4-205ENST00000482965 FBXL7Q9UJT9 491 aa6.77□□□□□ -1.33
SNX4-205ENST00000482965 A6NJY4 79 aa6.76□□□□□ -1.33
SNX4-205ENST00000482965 SEC14L6B5MCN3 397 aa6.76□□□□□ -1.33
SNX4-205ENST00000482965 OVOL1O14753 267 aa6.76□□□□□ -1.33
SNX4-205ENST00000482965 NDUFB8O95169 186 aa6.76□□□□□ -1.33
SNX4-205ENST00000482965 P0C879 139 aa6.76□□□□□ -1.33
SNX4-205ENST00000482965 ANXA3P12429 323 aa6.76□□□□□ -1.33
SNX4-205ENST00000482965 ZP3P21754 424 aa6.76□□□□□ -1.33
SNX4-205ENST00000482965 HOXD3P31249 432 aaPredicted RBP6.76□□□□□ -1.33
SNX4-205ENST00000482965 CCR6P51684 374 aa6.76□□□□□ -1.33
SNX4-205ENST00000482965 HSPE1P61604 102 aaKnown RBP6.76□□□□□ -1.33
SNX4-205ENST00000482965 WT1-ASQ06250 92 aa6.76□□□□□ -1.33
SNX4-205ENST00000482965 TMEM187Q14656 261 aa6.76□□□□□ -1.33
SNX4-205ENST00000482965 RBMS2Q15434 407 aaKnown RBP6.76□□□□□ -1.33
SNX4-205ENST00000482965 KPRPQ5T749 579 aaPredicted RBP6.76□□□□□ -1.33
SNX4-205ENST00000482965 C9orf66Q5T8R8 295 aa6.76□□□□□ -1.33
SNX4-205ENST00000482965 TMEM268Q5VZI3 342 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms