RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 CTRB1P17538 263 aa12.84□□□□□ -0.35
HMGN1-214ENST00000482733 AKR1C2P52895 323 aa12.84□□□□□ -0.35
HMGN1-214ENST00000482733 RAB25P57735 213 aa12.84□□□□□ -0.35
HMGN1-214ENST00000482733 RHOGP84095 191 aa12.84□□□□□ -0.35
HMGN1-214ENST00000482733 BAK1Q16611 211 aa12.84□□□□□ -0.35
HMGN1-214ENST00000482733 SP6Q3SY56 376 aa12.84□□□□□ -0.35
HMGN1-214ENST00000482733 CTRB2Q6GPI1 263 aa12.84□□□□□ -0.35
HMGN1-214ENST00000482733 NECAP1Q8NC96 275 aa12.84□□□□□ -0.35
HMGN1-214ENST00000482733 TMEM14BQ9NUH8 114 aa12.84□□□□□ -0.35
HMGN1-214ENST00000482733 CGB1A6NKQ9 187 aa12.83□□□□□ -0.36
HMGN1-214ENST00000482733 G3V4G9 280 aa12.83□□□□□ -0.36
HMGN1-214ENST00000482733 CYB5BO43169 146 aa12.83□□□□□ -0.36
HMGN1-214ENST00000482733 CDS2O95674 445 aa12.83□□□□□ -0.36
HMGN1-214ENST00000482733 DEFA4P12838 97 aa12.83□□□□□ -0.36
HMGN1-214ENST00000482733 AREGP15514 252 aa12.83□□□□□ -0.36
HMGN1-214ENST00000482733 IGLL1P15814 213 aa12.83□□□□□ -0.36
HMGN1-214ENST00000482733 ATP5G2Q06055 141 aa12.83□□□□□ -0.36
HMGN1-214ENST00000482733 KLK9Q2XQG4 91 aa12.83□□□□□ -0.36
HMGN1-214ENST00000482733 FAM209BQ5JX69 171 aa12.83□□□□□ -0.36
HMGN1-214ENST00000482733 LSM10Q969L4 123 aaKnown RBP12.83□□□□□ -0.36
HMGN1-214ENST00000482733 RRNAD1Q96FB5 475 aaKnown RBP12.83□□□□□ -0.36
HMGN1-214ENST00000482733 GALNT14Q96FL9 552 aa12.83□□□□□ -0.36
HMGN1-214ENST00000482733 TMEM56Q96MV1 263 aa12.83□□□□□ -0.36
HMGN1-214ENST00000482733 SDHCQ99643 169 aaPredicted RBP12.83□□□□□ -0.36
HMGN1-214ENST00000482733 ALX4Q9H161 411 aaPredicted RBP12.83□□□□□ -0.36
HMGN1-214ENST00000482733 RANGRFQ9HD47 186 aaPredicted RBP12.83□□□□□ -0.36
HMGN1-214ENST00000482733 NDUFA4L2Q9NRX3 87 aa12.83□□□□□ -0.36
HMGN1-214ENST00000482733 KLK9Q9UKQ9 250 aa12.83□□□□□ -0.36
HMGN1-214ENST00000482733 NSG2Q9Y328 171 aa12.83□□□□□ -0.36
HMGN1-214ENST00000482733 TNCP24821 2201 aa12.82□□□□□ -0.36
HMGN1-214ENST00000482733 IGLC7A0M8Q6 106 aa12.82□□□□□ -0.36
HMGN1-214ENST00000482733 CENPXA8MT69 81 aa12.82□□□□□ -0.36
HMGN1-214ENST00000482733 RBMXL2O75526 392 aaKnown RBP12.82□□□□□ -0.36
HMGN1-214ENST00000482733 PRH1P02810 166 aa12.82□□□□□ -0.36
HMGN1-214ENST00000482733 ANXA3P12429 323 aa12.82□□□□□ -0.36
HMGN1-214ENST00000482733 OXLD1Q5BKU9 147 aa12.82□□□□□ -0.36
HMGN1-214ENST00000482733 KPRPQ5T749 579 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-214ENST00000482733 ZNF343Q6P1L6 599 aa12.82□□□□□ -0.36
HMGN1-214ENST00000482733 FAM219AQ8IW50 185 aa12.82□□□□□ -0.36
HMGN1-214ENST00000482733 RNASE11Q8TAA1 199 aaKnown RBP12.82□□□□□ -0.36
HMGN1-214ENST00000482733 GLYATL2Q8WU03 294 aa12.82□□□□□ -0.36
HMGN1-214ENST00000482733 RBPMSQ93062 196 aaKnown RBP12.82□□□□□ -0.36
HMGN1-214ENST00000482733 C7orf50Q9BRJ6 194 aaKnown RBP12.82□□□□□ -0.36
HMGN1-214ENST00000482733 AKIP1Q9NQ31 210 aa12.82□□□□□ -0.36
HMGN1-214ENST00000482733 IGHV4OR15-8A0A075B7B6 117 aa12.81□□□□□ -0.36
HMGN1-214ENST00000482733 A0A087WW49 117 aa12.81□□□□□ -0.36
HMGN1-214ENST00000482733 PIGBOS1A0A0B4J2F0 54 aa12.81□□□□□ -0.36
HMGN1-214ENST00000482733 IGKV1-5P01602 117 aa12.81□□□□□ -0.36
HMGN1-214ENST00000482733 P0C879 139 aa12.81□□□□□ -0.36
HMGN1-214ENST00000482733 IL7P13232 177 aa12.81□□□□□ -0.36
HMGN1-214ENST00000482733 AKR1C4P17516 323 aa12.81□□□□□ -0.36
HMGN1-214ENST00000482733 ZP3P21754 424 aa12.81□□□□□ -0.36
HMGN1-214ENST00000482733 HSPE1P61604 102 aaKnown RBP12.81□□□□□ -0.36
HMGN1-214ENST00000482733 BEAN1Q3B7T3 259 aa12.81□□□□□ -0.36
HMGN1-214ENST00000482733 ZNF429Q86V71 674 aa12.81□□□□□ -0.36
HMGN1-214ENST00000482733 C1QL4Q86Z23 238 aa12.81□□□□□ -0.36
HMGN1-214ENST00000482733 S100ZQ8WXG8 99 aa12.81□□□□□ -0.36
HMGN1-214ENST00000482733 IL22RA2Q969J5 263 aa12.81□□□□□ -0.36
HMGN1-214ENST00000482733 TMEM230Q96A57 120 aa12.81□□□□□ -0.36
HMGN1-214ENST00000482733 HINT2Q9BX68 163 aa12.81□□□□□ -0.36
HMGN1-214ENST00000482733 PTTG2Q9NZH5 202 aa12.81□□□□□ -0.36
HMGN1-214ENST00000482733 THYN1Q9P016 225 aa12.81□□□□□ -0.36
HMGN1-214ENST00000482733 PEF1Q9UBV8 284 aaKnown RBP12.81□□□□□ -0.36
HMGN1-214ENST00000482733 TMEM56-RWDD3S4R434 201 aa12.81□□□□□ -0.36
HMGN1-214ENST00000482733 OR2J3O76001 311 aa12.8□□□□□ -0.36
HMGN1-214ENST00000482733 REG1AP05451 166 aa12.8□□□□□ -0.36
HMGN1-214ENST00000482733 OR13C7P0DN81 318 aa12.8□□□□□ -0.36
HMGN1-214ENST00000482733 SRPXP78539 464 aa12.8□□□□□ -0.36
HMGN1-214ENST00000482733 RBMS2Q15434 407 aaKnown RBP12.8□□□□□ -0.36
HMGN1-214ENST00000482733 C15orf32Q32M92 178 aa12.8□□□□□ -0.36
HMGN1-214ENST00000482733 OR10W1Q8NGF6 305 aa12.8□□□□□ -0.36
HMGN1-214ENST00000482733 OR1L6Q8NGR2 347 aa12.8□□□□□ -0.36
HMGN1-214ENST00000482733 FANCD2OSQ96PS1 177 aa12.8□□□□□ -0.36
HMGN1-214ENST00000482733 FBXL7Q9UJT9 491 aa12.8□□□□□ -0.36
HMGN1-214ENST00000482733 MEGF8Q7Z7M0 2845 aa12.8□□□□□ -0.36
HMGN1-214ENST00000482733 IGLV11-55A0A075B6I3 123 aa12.79□□□□□ -0.36
HMGN1-214ENST00000482733 DBX1A6NMT0 343 aa12.79□□□□□ -0.36
HMGN1-214ENST00000482733 MECP2P51608 486 aaKnown RBP12.79□□□□□ -0.36
HMGN1-214ENST00000482733 PRCDQ00LT1 54 aa12.79□□□□□ -0.36
HMGN1-214ENST00000482733 DEFA6Q01524 100 aa12.79□□□□□ -0.36
HMGN1-214ENST00000482733 WT1-ASQ06250 92 aa12.79□□□□□ -0.36
HMGN1-214ENST00000482733 EXOSC2Q13868 293 aaKnown RBP12.79□□□□□ -0.36
HMGN1-214ENST00000482733 TMEM187Q14656 261 aa12.79□□□□□ -0.36
HMGN1-214ENST00000482733 TMEM128Q5BJH2 165 aa12.79□□□□□ -0.36
HMGN1-214ENST00000482733 TMEM268Q5VZI3 342 aa12.79□□□□□ -0.36
HMGN1-214ENST00000482733 TMED4Q7Z7H5 227 aa12.79□□□□□ -0.36
HMGN1-214ENST00000482733 SELENOHQ8IZQ5 122 aaKnown RBP12.79□□□□□ -0.36
HMGN1-214ENST00000482733 PDCD10Q9BUL8 212 aa12.79□□□□□ -0.36
HMGN1-214ENST00000482733 CCDC32Q9BV29 185 aa12.79□□□□□ -0.36
HMGN1-214ENST00000482733 ZMAT5Q9UDW3 170 aaKnown RBP12.79□□□□□ -0.36
HMGN1-214ENST00000482733 A0A0B4J293 547 aa12.78□□□□□ -0.36
HMGN1-214ENST00000482733 ANKRD34BA5PLL1 514 aa12.78□□□□□ -0.36
HMGN1-214ENST00000482733 OVOL1O14753 267 aa12.78□□□□□ -0.36
HMGN1-214ENST00000482733 SLURP1P55000 103 aa12.78□□□□□ -0.36
HMGN1-214ENST00000482733 DEFA5Q01523 94 aa12.78□□□□□ -0.36
HMGN1-214ENST00000482733 C9orf66Q5T8R8 295 aa12.78□□□□□ -0.36
HMGN1-214ENST00000482733 C19orf35Q6ZS72 473 aa12.78□□□□□ -0.36
HMGN1-214ENST00000482733 LHFPL5Q8TAF8 219 aa12.78□□□□□ -0.36
HMGN1-214ENST00000482733 DCUN1D4Q92564 292 aa12.78□□□□□ -0.36
HMGN1-214ENST00000482733 CXorf58Q96LI9 332 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms