RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 GMPPBQ9Y5P6 360 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 DNAH8Q96JB1 4490 aa1.25□□□□□ -2.21
USH2A-204ENST00000481786 IGHV3OR16-8A0A075B7F1 116 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 TRAV27A0A087WT01 109 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 A0A087WUU8 490 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 MEIKINA0A087WXM9 373 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 TRBV9A0A0B4J1U6 114 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 A0A0J9YXV3 536 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 PQLC2LA1A4F0 135 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 EFCAB9A8MZ26 197 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 PPP5D1E7EU14 171 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 H0YJW9 148 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 H3BTX0 84 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 K7EP13 123 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 PGRMC1O00264 195 aaKnown RBP1.24□□□□□ -2.21
USH2A-204ENST00000481786 DCTN6O00399 190 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 ZNF593O00488 134 aaPredicted RBP1.24□□□□□ -2.21
USH2A-204ENST00000481786 SLC22A1O15245 554 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 LANCL1O43813 399 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 OR2H2O95918 312 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 CA2P00918 260 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 NRASP01111 189 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 HLA-AP01891 365 aaKnown RBP1.24□□□□□ -2.21
USH2A-204ENST00000481786 IL6P05231 212 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 CRYGCP07315 174 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 GSTT2P0CG29 244 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 GSTT2BP0CG30 244 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 MYL2P10916 166 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 DBTP11182 482 aaKnown RBP1.24□□□□□ -2.21
USH2A-204ENST00000481786 IFI30P13284 250 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 HSD11B1P28845 292 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 PHBP35232 272 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 RPS10P46783 165 aaKnown RBP1.24□□□□□ -2.21
USH2A-204ENST00000481786 SERPINB9P50453 376 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 EMP1P54849 157 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 ZNF121P58317 390 aaPredicted RBP1.24□□□□□ -2.21
USH2A-204ENST00000481786 TAS2R41P59536 307 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 RHOGP84095 191 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 CDK6Q00534 326 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 DR1Q01658 176 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 RIPPLY1Q0D2K3 151 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 EXOSC2Q13868 293 aaKnown RBP1.24□□□□□ -2.21
USH2A-204ENST00000481786 FXYD3Q14802 87 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 LTC4SQ16873 150 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 ZNF684Q5T5D7 378 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 FAM222AQ5U5X8 452 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 METTL21CQ5VZV1 264 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 PLCXD3Q63HM9 321 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 TCF24Q7RTU0 167 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 DCXRQ7Z4W1 244 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 H1FOOQ8IZA3 346 aaPredicted RBP1.24□□□□□ -2.21
USH2A-204ENST00000481786 BATF2Q8N1L9 274 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 FAM86B1Q8N7N1 296 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 Q8N814 137 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 SUMF2Q8NBJ7 301 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 CHST4Q8NCG5 386 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 ZNF439Q8NDP4 499 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 OR52M1Q8NGK5 317 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 GRPEL2Q8TAA5 225 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 CIRBP-AS1Q8TBR5 109 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 ACTRT1Q8TDG2 376 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 GIMAP1Q8WWP7 306 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 SLAMF6Q96DU3 332 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 MS4A14Q96JA4 679 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 GPX7Q96SL4 187 aaPredicted RBP1.24□□□□□ -2.21
USH2A-204ENST00000481786 AMELYQ99218 206 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 SORT1Q99523 831 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 RNF5Q99942 180 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 SULT4A1Q9BR01 284 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 FBXL15Q9H469 300 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 FAM206AQ9NX38 181 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 MTCH1Q9NZJ7 389 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 CD300AQ9UGN4 299 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 B9D1Q9UPM9 204 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 MRPS16Q9Y3D3 137 aaKnown RBP1.24□□□□□ -2.21
USH2A-204ENST00000481786 CDH10Q9Y6N8 788 aa1.24□□□□□ -2.21
USH2A-204ENST00000481786 FCGBPQ9Y6R7 5405 aaPredicted RBP1.23□□□□□ -2.21
USH2A-204ENST00000481786 IGKV2D-24A0A075B6R9 120 aa1.23□□□□□ -2.21
USH2A-204ENST00000481786 TRBV6-6A0A0A6YYG2 114 aa1.23□□□□□ -2.21
USH2A-204ENST00000481786 ZNF705FA8MVS1 300 aaPredicted RBP1.23□□□□□ -2.21
USH2A-204ENST00000481786 SIRPB1O00241 398 aa1.23□□□□□ -2.21
USH2A-204ENST00000481786 SDCBPO00560 298 aaPredicted RBP1.23□□□□□ -2.21
USH2A-204ENST00000481786 SIVA1O15304 175 aa1.23□□□□□ -2.21
USH2A-204ENST00000481786 SOCS1O15524 211 aa1.23□□□□□ -2.21
USH2A-204ENST00000481786 PLIN3O60664 434 aa1.23□□□□□ -2.21
USH2A-204ENST00000481786 ENTPD6O75354 484 aa1.23□□□□□ -2.21
USH2A-204ENST00000481786 GATBO75879 557 aaKnown RBP1.23□□□□□ -2.21
USH2A-204ENST00000481786 RBBP9O75884 186 aa1.23□□□□□ -2.21
USH2A-204ENST00000481786 CYB5AP00167 134 aa1.23□□□□□ -2.21
USH2A-204ENST00000481786 IGLV3-1P01715 115 aa1.23□□□□□ -2.21
USH2A-204ENST00000481786 ZNF705DP0CH99 300 aaPredicted RBP1.23□□□□□ -2.21
USH2A-204ENST00000481786 ZNF705BP0CI00 300 aaPredicted RBP1.23□□□□□ -2.21
USH2A-204ENST00000481786 ZNF3P17036 446 aa1.23□□□□□ -2.21
USH2A-204ENST00000481786 GZMHP20718 246 aa1.23□□□□□ -2.21
USH2A-204ENST00000481786 PSMB6P28072 239 aa1.23□□□□□ -2.21
USH2A-204ENST00000481786 SSTR5P35346 364 aa1.23□□□□□ -2.21
USH2A-204ENST00000481786 RPS27P42677 84 aaKnown RBP1.23□□□□□ -2.21
USH2A-204ENST00000481786 GLP1RP43220 463 aa1.23□□□□□ -2.21
USH2A-204ENST00000481786 MAGEA2P43356 314 aa1.23□□□□□ -2.21
USH2A-204ENST00000481786 DAD1P61803 113 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms