RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 SLC35G3Q8N808 338 aa11.76□□□□□ -0.53
ABCF3-213ENST00000480539 OR1L8Q8NGR8 309 aa11.76□□□□□ -0.53
ABCF3-213ENST00000480539 RRNAD1Q96FB5 475 aaKnown RBP11.76□□□□□ -0.53
ABCF3-213ENST00000480539 RAX2Q96IS3 184 aa11.76□□□□□ -0.53
ABCF3-213ENST00000480539 UBE2E2Q96LR5 201 aa11.76□□□□□ -0.53
ABCF3-213ENST00000480539 ALX4Q9H161 411 aaPredicted RBP11.76□□□□□ -0.53
ABCF3-213ENST00000480539 SLA2Q9H6Q3 261 aa11.76□□□□□ -0.53
ABCF3-213ENST00000480539 TBC1D24Q9ULP9 559 aa11.76□□□□□ -0.53
ABCF3-213ENST00000480539 KCNIP3Q9Y2W7 256 aa11.76□□□□□ -0.53
ABCF3-213ENST00000480539 TNCP24821 2201 aa11.76□□□□□ -0.53
ABCF3-213ENST00000480539 VWFP04275 2813 aa11.76□□□□□ -0.53
ABCF3-213ENST00000480539 NPIPB5A8MRT5 1133 aa11.75□□□□□ -0.53
ABCF3-213ENST00000480539 UPK1BO75841 260 aa11.75□□□□□ -0.53
ABCF3-213ENST00000480539 TRAPPC2P0DI81 140 aa11.75□□□□□ -0.53
ABCF3-213ENST00000480539 TRAPPC2BP0DI82 140 aa11.75□□□□□ -0.53
ABCF3-213ENST00000480539 PSMB6P28072 239 aa11.75□□□□□ -0.53
ABCF3-213ENST00000480539 TMEM128Q5BJH2 165 aa11.75□□□□□ -0.53
ABCF3-213ENST00000480539 SPINK9Q5DT21 86 aa11.75□□□□□ -0.53
ABCF3-213ENST00000480539 SLC25A42Q86VD7 318 aa11.75□□□□□ -0.53
ABCF3-213ENST00000480539 TMEM56Q96MV1 263 aa11.75□□□□□ -0.53
ABCF3-213ENST00000480539 C20orf85Q9H1P6 137 aa11.75□□□□□ -0.53
ABCF3-213ENST00000480539 NDUFA4L2Q9NRX3 87 aa11.75□□□□□ -0.53
ABCF3-213ENST00000480539 ZNF257Q9Y2Q1 563 aa11.75□□□□□ -0.53
ABCF3-213ENST00000480539 TMEM56-RWDD3S4R434 201 aa11.75□□□□□ -0.53
ABCF3-213ENST00000480539 A0A0B4J293 547 aa11.74□□□□□ -0.53
ABCF3-213ENST00000480539 I3L521 148 aa11.74□□□□□ -0.53
ABCF3-213ENST00000480539 ANXA7P20073 488 aaKnown RBP11.74□□□□□ -0.53
ABCF3-213ENST00000480539 MECP2P51608 486 aaKnown RBP11.74□□□□□ -0.53
ABCF3-213ENST00000480539 ANKRD55Q3KP44 614 aa11.74□□□□□ -0.53
ABCF3-213ENST00000480539 THOC7Q6I9Y2 204 aaKnown RBP11.74□□□□□ -0.53
ABCF3-213ENST00000480539 OR5B3Q8NH48 314 aa11.74□□□□□ -0.53
ABCF3-213ENST00000480539 IL22RA2Q969J5 263 aa11.74□□□□□ -0.53
ABCF3-213ENST00000480539 LSM10Q969L4 123 aaKnown RBP11.74□□□□□ -0.53
ABCF3-213ENST00000480539 FKBP11Q9NYL4 201 aa11.74□□□□□ -0.53
ABCF3-213ENST00000480539 C13orf42A0A1B0GVH6 325 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 CCL24O00175 119 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 ST8SIA3O43173 380 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 OR2J3O76001 311 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 SFT2D2O95562 160 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 HLA-AP01891 365 aaKnown RBP11.73□□□□□ -0.53
ABCF3-213ENST00000480539 LGALS1P09382 135 aaKnown RBP11.73□□□□□ -0.53
ABCF3-213ENST00000480539 OR13C7P0DN81 318 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 CTRB1P17538 263 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 SLC6A1P30531 599 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 RAB25P57735 213 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 SRPXP78539 464 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 RHOGP84095 191 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 IFITM3Q01628 133 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 WT1-ASQ06250 92 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 ASAH1Q13510 395 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 CTRB2Q6GPI1 263 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 LYZL2Q7Z4W2 148 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 FAM219AQ8IW50 185 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 LGI3Q8N145 548 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 NUDT15Q9NV35 164 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 CACNG5Q9UF02 275 aa11.73□□□□□ -0.53
ABCF3-213ENST00000480539 NXPH3O95157 252 aa11.72□□□□□ -0.53
ABCF3-213ENST00000480539 CRYGCP07315 174 aa11.72□□□□□ -0.53
ABCF3-213ENST00000480539 DEFA4P12838 97 aa11.72□□□□□ -0.53
ABCF3-213ENST00000480539 UBE2MP61081 183 aaKnown RBP11.72□□□□□ -0.53
ABCF3-213ENST00000480539 PRCDQ00LT1 54 aa11.72□□□□□ -0.53
ABCF3-213ENST00000480539 EXOSC2Q13868 293 aaKnown RBP11.72□□□□□ -0.53
ABCF3-213ENST00000480539 Q6ZRM9 215 aa11.72□□□□□ -0.53
ABCF3-213ENST00000480539 MRPL41Q8IXM3 137 aaKnown RBP11.72□□□□□ -0.53
ABCF3-213ENST00000480539 LINC00482Q8N8I6 264 aa11.72□□□□□ -0.53
ABCF3-213ENST00000480539 OR11H1Q8NG94 326 aa11.72□□□□□ -0.53
ABCF3-213ENST00000480539 GPR146Q96CH1 333 aa11.72□□□□□ -0.53
ABCF3-213ENST00000480539 P2RX4Q99571 388 aa11.72□□□□□ -0.53
ABCF3-213ENST00000480539 SRSF8Q9BRL6 282 aaKnown RBP11.72□□□□□ -0.53
ABCF3-213ENST00000480539 TRAV6A0A075B6T7 132 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 IGHV4OR15-8A0A075B7B6 117 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 A0A087WW49 117 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 TRBV9A0A0B4J1U6 114 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 A0A0B4J2A0 478 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 A0A0G2JLM5 398 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 FAM223BA6NKX1 122 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 BRI3O95415 125 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 DHFRP00374 187 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 IFNA17P01571 189 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 TCRBP04435 133 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 OR4E1P0C645 316 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 CD33P20138 364 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 MYCNOSP40205 109 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 HOXA1P49639 335 aaPredicted RBP11.71□□□□□ -0.53
ABCF3-213ENST00000480539 HSPE1P61604 102 aaKnown RBP11.71□□□□□ -0.53
ABCF3-213ENST00000480539 RUNX1Q01196 453 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 C4orf46Q504U0 113 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 MZT2BQ6NZ67 158 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 ZNF429Q86V71 674 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 FAM223AQ8IWN6 122 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 FANCD2OSQ96PS1 177 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 PDCD10Q9BUL8 212 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 PLEKHA3Q9HB20 300 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 SHPKQ9UHJ6 478 aa11.71□□□□□ -0.53
ABCF3-213ENST00000480539 IGLV11-55A0A075B6I3 123 aa11.7□□□□□ -0.54
ABCF3-213ENST00000480539 FAM240BA0A1B0GVZ2 78 aa11.7□□□□□ -0.54
ABCF3-213ENST00000480539 C9orf170A2RU37 121 aa11.7□□□□□ -0.54
ABCF3-213ENST00000480539 ANKRD34BA5PLL1 514 aa11.7□□□□□ -0.54
ABCF3-213ENST00000480539 ZNF616Q08AN1 781 aa11.7□□□□□ -0.54
ABCF3-213ENST00000480539 DHRS2Q13268 280 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms