RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 HINT2Q9BX68 163 aa9.33□□□□□ -0.92
CCM2-212ENST00000480382 AKIP1Q9NQ31 210 aa9.33□□□□□ -0.92
CCM2-212ENST00000480382 TMEM14BQ9NUH8 114 aa9.33□□□□□ -0.92
CCM2-212ENST00000480382 PRNDQ9UKY0 176 aa9.33□□□□□ -0.92
CCM2-212ENST00000480382 ZNF257Q9Y2Q1 563 aa9.33□□□□□ -0.92
CCM2-212ENST00000480382 OR51B2Q9Y5P1 312 aa9.33□□□□□ -0.92
CCM2-212ENST00000480382 DNAH3Q8TD57 4116 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 TRBV9A0A0B4J1U6 114 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 A0A0G2JRQ6 117 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 LINC00854A0A1B0GVQ3 168 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 ANKRD34BA5PLL1 514 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 LINC01619G3V211 115 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 OR2J3O76001 311 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 CRYGCP07315 174 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 P0C879 139 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 TRAPPC2P0DI81 140 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 TRAPPC2BP0DI82 140 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 AKR1C4P17516 323 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 SLURP1P55000 103 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 TMED4Q7Z7H5 227 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 SGPP2Q8IWX5 399 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 OR1L8Q8NGR8 309 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 OR4A16Q8NH70 328 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 GLYATL2Q8WU03 294 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 DPF1Q92782 380 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 TMEM222Q9H0R3 208 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 PRR13Q9NZ81 148 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 PTTG2Q9NZH5 202 aa9.32□□□□□ -0.92
CCM2-212ENST00000480382 NOTCH3Q9UM47 2321 aa9.31□□□□□ -0.92
CCM2-212ENST00000480382 FAM223BA6NKX1 122 aa9.31□□□□□ -0.92
CCM2-212ENST00000480382 ATG12O94817 140 aa9.31□□□□□ -0.92
CCM2-212ENST00000480382 CDS2O95674 445 aa9.31□□□□□ -0.92
CCM2-212ENST00000480382 MECP2P51608 486 aaKnown RBP9.31□□□□□ -0.92
CCM2-212ENST00000480382 CCR6P51684 374 aa9.31□□□□□ -0.92
CCM2-212ENST00000480382 SUPT4H1P63272 117 aaKnown RBP9.31□□□□□ -0.92
CCM2-212ENST00000480382 DHODHQ02127 395 aa9.31□□□□□ -0.92
CCM2-212ENST00000480382 WT1-ASQ06250 92 aa9.31□□□□□ -0.92
CCM2-212ENST00000480382 EXOSC2Q13868 293 aaKnown RBP9.31□□□□□ -0.92
CCM2-212ENST00000480382 BEAN1Q3B7T3 259 aa9.31□□□□□ -0.92
CCM2-212ENST00000480382 THOC7Q6I9Y2 204 aaKnown RBP9.31□□□□□ -0.92
CCM2-212ENST00000480382 FAM223AQ8IWN6 122 aa9.31□□□□□ -0.92
CCM2-212ENST00000480382 OR5B3Q8NH48 314 aa9.31□□□□□ -0.92
CCM2-212ENST00000480382 RNASE11Q8TAA1 199 aaKnown RBP9.31□□□□□ -0.92
CCM2-212ENST00000480382 LSM10Q969L4 123 aaKnown RBP9.31□□□□□ -0.92
CCM2-212ENST00000480382 USMG5Q96IX5 58 aa9.31□□□□□ -0.92
CCM2-212ENST00000480382 SRSF8Q9BRL6 282 aaKnown RBP9.31□□□□□ -0.92
CCM2-212ENST00000480382 BATF3Q9NR55 127 aa9.31□□□□□ -0.92
CCM2-212ENST00000480382 NDUFA4L2Q9NRX3 87 aa9.31□□□□□ -0.92
CCM2-212ENST00000480382 FKBP11Q9NYL4 201 aa9.31□□□□□ -0.92
CCM2-212ENST00000480382 IGLV11-55A0A075B6I3 123 aa9.3□□□□□ -0.92
CCM2-212ENST00000480382 NAP1L6A6NFF2 107 aa9.3□□□□□ -0.92
CCM2-212ENST00000480382 DUS4LO95620 317 aaKnown RBP9.3□□□□□ -0.92
CCM2-212ENST00000480382 DHFRP00374 187 aa9.3□□□□□ -0.92
CCM2-212ENST00000480382 TRBV12-3P01733 135 aa9.3□□□□□ -0.92
CCM2-212ENST00000480382 HSPB1P04792 205 aaKnown RBP9.3□□□□□ -0.92
CCM2-212ENST00000480382 OR13C7P0DN81 318 aa9.3□□□□□ -0.92
CCM2-212ENST00000480382 DEFA4P12838 97 aa9.3□□□□□ -0.92
CCM2-212ENST00000480382 DEFA6Q01524 100 aa9.3□□□□□ -0.92
CCM2-212ENST00000480382 ATP5G2Q06055 141 aa9.3□□□□□ -0.92
CCM2-212ENST00000480382 TMEM187Q14656 261 aa9.3□□□□□ -0.92
CCM2-212ENST00000480382 RBMS2Q15434 407 aaKnown RBP9.3□□□□□ -0.92
CCM2-212ENST00000480382 C15orf32Q32M92 178 aa9.3□□□□□ -0.92
CCM2-212ENST00000480382 KPRPQ5T749 579 aaPredicted RBP9.3□□□□□ -0.92
CCM2-212ENST00000480382 TMEM268Q5VZI3 342 aa9.3□□□□□ -0.92
CCM2-212ENST00000480382 ZNF343Q6P1L6 599 aa9.3□□□□□ -0.92
CCM2-212ENST00000480382 SELENOHQ8IZQ5 122 aaKnown RBP9.3□□□□□ -0.92
CCM2-212ENST00000480382 NECAP1Q8NC96 275 aa9.3□□□□□ -0.92
CCM2-212ENST00000480382 DCUN1D4Q92564 292 aa9.3□□□□□ -0.92
CCM2-212ENST00000480382 RBPMSQ93062 196 aaKnown RBP9.3□□□□□ -0.92
CCM2-212ENST00000480382 RRNAD1Q96FB5 475 aaKnown RBP9.3□□□□□ -0.92
CCM2-212ENST00000480382 GALNT14Q96FL9 552 aa9.3□□□□□ -0.92
CCM2-212ENST00000480382 FANCD2OSQ96PS1 177 aa9.3□□□□□ -0.92
CCM2-212ENST00000480382 SLC25A21Q9BQT8 299 aaPredicted RBP9.3□□□□□ -0.92
CCM2-212ENST00000480382 FBXL7Q9UJT9 491 aa9.3□□□□□ -0.92
CCM2-212ENST00000480382 A0A0B4J293 547 aa9.29□□□□□ -0.92
CCM2-212ENST00000480382 NDUFB8O95169 186 aa9.29□□□□□ -0.92
CCM2-212ENST00000480382 IGHV3-23P01764 117 aa9.29□□□□□ -0.92
CCM2-212ENST00000480382 HOXD3P31249 432 aaPredicted RBP9.29□□□□□ -0.92
CCM2-212ENST00000480382 BTCP35070 178 aa9.29□□□□□ -0.92
CCM2-212ENST00000480382 PRCDQ00LT1 54 aa9.29□□□□□ -0.92
CCM2-212ENST00000480382 SPINK9Q5DT21 86 aa9.29□□□□□ -0.92
CCM2-212ENST00000480382 LINC00299Q6ZSB3 139 aa9.29□□□□□ -0.92
CCM2-212ENST00000480382 HSD17B13Q7Z5P4 300 aaPredicted RBP9.29□□□□□ -0.92
CCM2-212ENST00000480382 ZNF429Q86V71 674 aa9.29□□□□□ -0.92
CCM2-212ENST00000480382 SLC35G3Q8N808 338 aa9.29□□□□□ -0.92
CCM2-212ENST00000480382 DLX4Q92988 240 aaPredicted RBP9.29□□□□□ -0.92
CCM2-212ENST00000480382 TMEM56Q96MV1 263 aa9.29□□□□□ -0.92
CCM2-212ENST00000480382 MCRIP2Q9BUT9 160 aaKnown RBP9.29□□□□□ -0.92
CCM2-212ENST00000480382 RANGRFQ9HD47 186 aaPredicted RBP9.29□□□□□ -0.92
CCM2-212ENST00000480382 PEF1Q9UBV8 284 aaKnown RBP9.29□□□□□ -0.92
CCM2-212ENST00000480382 KCNIP3Q9Y2W7 256 aa9.29□□□□□ -0.92
CCM2-212ENST00000480382 DMRT1Q9Y5R6 373 aa9.29□□□□□ -0.92
CCM2-212ENST00000480382 S4R3C0 116 aa9.29□□□□□ -0.92
CCM2-212ENST00000480382 MFSD2BA6NFX1 497 aa9.28□□□□□ -0.92
CCM2-212ENST00000480382 CENPXA8MT69 81 aa9.28□□□□□ -0.92
CCM2-212ENST00000480382 OVOL1O14753 267 aa9.28□□□□□ -0.92
CCM2-212ENST00000480382 ST8SIA3O43173 380 aa9.28□□□□□ -0.92
CCM2-212ENST00000480382 PRB2P02812 416 aaPredicted RBP9.28□□□□□ -0.92
CCM2-212ENST00000480382 ANXA3P12429 323 aa9.28□□□□□ -0.92
CCM2-212ENST00000480382 HIST1H1BP16401 226 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms