RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 PSG5Q15238 335 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 MRGPRG-AS1Q2M3A8 158 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 LRRC75BQ2VPJ9 315 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 VMA21Q3ZAQ7 101 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 ZFP69Q49AA0 526 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 LRRC37A5PQ49AS3 106 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 FAM120AOSQ5T036 256 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 SPNS3Q6ZMD2 512 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 FAM71E2Q8N5Q1 922 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 TEX29Q8N6K0 151 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 NPBQ8NG41 125 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 OR11H4Q8NGC9 324 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 OR2T10Q8NGZ9 312 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 OR4A5Q8NH83 315 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 OR1S1Q8NH92 325 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 VSTM2AQ8TAG5 236 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 NANPQ8TBE9 248 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 TMEM167AQ8TBQ9 72 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 RAX2Q96IS3 184 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 TSNAXQ99598 290 aaKnown RBP5.3□□□□□ -1.56
USP48-208ENST00000479177 AIFM2Q9BRQ8 373 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 QTRT1Q9BXR0 403 aaKnown RBP5.3□□□□□ -1.56
USP48-208ENST00000479177 TMEM14BQ9NUH8 114 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 MBD2Q9UBB5 411 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 NUP50Q9UKX7 468 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 FOXA2Q9Y261 457 aaPredicted RBP5.3□□□□□ -1.56
USP48-208ENST00000479177 POMT1Q9Y6A1 747 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 SVEP1Q4LDE5 3571 aa5.3□□□□□ -1.56
USP48-208ENST00000479177 FXYD6-FXYD2A0A087WZ82 144 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 MDFIC2A0A1B0GVS7 189 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 H0YIZ8 118 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 RRHO14718 337 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 NBR2O15453 112 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 ST8SIA3O43173 380 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 DEDDO75618 318 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 NXPH3O95157 252 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 HNRNPCP07910 306 aaKnown RBP eCLIP5.29□□□□□ -1.56
USP48-208ENST00000479177 FGF2P09038 288 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 FAM106CPP0CH98 169 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 PET100P0DJ07 73 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 SLC25A4P12235 298 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 LYL1P12980 280 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 CD24P25063 80 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 TNFRSF9Q07011 255 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 FGL1Q08830 312 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 HES1Q14469 280 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 HNF4GQ14541 408 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 MMDQ15546 238 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 AANATQ16613 207 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 PDLIM3Q53GG5 364 aaPredicted RBP5.29□□□□□ -1.56
USP48-208ENST00000479177 CXorf66Q5JRM2 361 aaPredicted RBP5.29□□□□□ -1.56
USP48-208ENST00000479177 C11orf87Q6NUJ2 197 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 PRSS54Q6PEW0 395 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 NOXA1Q86UR1 476 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 ZNF429Q86V71 674 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 TEX45Q8NA69 505 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 OR4A16Q8NH70 328 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 PIFOQ8TCI5 191 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 ST8SIA2Q92186 375 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 C11orf1Q9H5F2 150 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 ZNF430Q9H8G1 570 aaPredicted RBP5.29□□□□□ -1.56
USP48-208ENST00000479177 YAE1D1Q9NRH1 226 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 PLSCR3Q9NRY6 295 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.29□□□□□ -1.56
USP48-208ENST00000479177 ZFP57Q9NU63 452 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 OR5AC2Q9NZP5 309 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 HSPB7Q9UBY9 170 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 PRNDQ9UKY0 176 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 NSG2Q9Y328 171 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 SIGLEC9Q9Y336 463 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 FAM96BQ9Y3D0 163 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 LSM5Q9Y4Y9 91 aaKnown RBP5.29□□□□□ -1.56
USP48-208ENST00000479177 JMJD1CQ15652 2540 aa5.29□□□□□ -1.56
USP48-208ENST00000479177 H3BUX3 64 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 SSSCA1O60232 199 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 RBMXL2O75526 392 aaKnown RBP5.28□□□□□ -1.56
USP48-208ENST00000479177 SNAPC5O75971 98 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 TMEM50AO95807 157 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 MYOD1P15172 320 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 TMEM11P17152 192 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 NKX2-5P52952 324 aaPredicted RBP5.28□□□□□ -1.56
USP48-208ENST00000479177 F2RL1P55085 397 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 POLR2GP62487 172 aaKnown RBP eCLIP5.28□□□□□ -1.56
USP48-208ENST00000479177 RPL8P62917 257 aaKnown RBP5.28□□□□□ -1.56
USP48-208ENST00000479177 SSBP2P81877 361 aaPredicted RBP5.28□□□□□ -1.56
USP48-208ENST00000479177 PJVKQ0ZLH3 352 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 PRSS8Q16651 343 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 C5orf64Q2M2E5 130 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 DEFB112Q30KQ8 113 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 C10orf55Q5SWW7 151 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 IL17RELQ6ZVW7 336 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 OR8H1Q8NGG4 311 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 OR5B3Q8NH48 314 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 OR52E5Q8NH55 327 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 GRPEL2Q8TAA5 225 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 THAP6Q8TBB0 222 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 ZNF48Q96MX3 618 aaPredicted RBP5.28□□□□□ -1.56
USP48-208ENST00000479177 RNF126Q9BV68 326 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 MAGT1Q9H0U3 335 aa5.28□□□□□ -1.56
USP48-208ENST00000479177 FBXL15Q9H469 300 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms