RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 IDI2-AS1Q9NZ38 188 aa8.85□□□□□ -0.99
VPS52-217ENST00000478934 TLN1Q9Y490 2541 aaKnown RBP8.85□□□□□ -0.99
VPS52-217ENST00000478934 A8MXE2 369 aa8.85□□□□□ -0.99
VPS52-217ENST00000478934 OR4A8P0C604 315 aa8.85□□□□□ -0.99
VPS52-217ENST00000478934 NDUFB7P17568 137 aa8.85□□□□□ -0.99
VPS52-217ENST00000478934 IGFBP2P18065 325 aa8.85□□□□□ -0.99
VPS52-217ENST00000478934 PRB3Q04118 309 aaPredicted RBP8.85□□□□□ -0.99
VPS52-217ENST00000478934 HLA-DRB5Q30154 266 aa8.85□□□□□ -0.99
VPS52-217ENST00000478934 AARDQ4LEZ3 155 aa8.85□□□□□ -0.99
VPS52-217ENST00000478934 TRGV10A0A0A0MS01 117 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 C15orf61A6NNL5 157 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 SPINK4O60575 86 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 CT45A6P0DMU7 189 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 CT45A5P0DMU8 189 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 CT45A7P0DMV0 189 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 CCL3L1P16619 93 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 MRPL41Q8IXM3 137 aaKnown RBP8.84□□□□□ -0.99
VPS52-217ENST00000478934 OR10W1Q8NGF6 305 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 OCC1Q8TAD7 63 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 ANAPC16Q96DE5 110 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 DIRC2Q96SL1 478 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 TRAPPC1Q9Y5R8 145 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 TSTD3H0UI37 97 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 GGCTO75223 188 aaKnown RBP8.84□□□□□ -0.99
VPS52-217ENST00000478934 IL6RP08887 468 aaPredicted RBP8.84□□□□□ -0.99
VPS52-217ENST00000478934 PKIAP61925 76 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 OR5I1Q13606 314 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 DIAPH2-AS1Q14236 149 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 JOSD1Q15040 202 aaPredicted RBP8.84□□□□□ -0.99
VPS52-217ENST00000478934 IGFL3Q6UXB1 125 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 ZNF439Q8NDP4 499 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 OR4S2Q8NH73 311 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 FAM216AQ8WUB2 273 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 NBASA2RRP1 2371 aa8.84□□□□□ -0.99
VPS52-217ENST00000478934 TPRP12270 2363 aaKnown RBP8.84□□□□□ -0.99
VPS52-217ENST00000478934 F6UZH7 168 aa8.84□□□□□ -1
VPS52-217ENST00000478934 GATCO43716 136 aaKnown RBP8.84□□□□□ -1
VPS52-217ENST00000478934 NPY1RP25929 384 aa8.84□□□□□ -1
VPS52-217ENST00000478934 DLX1P56177 255 aa8.84□□□□□ -1
VPS52-217ENST00000478934 TCF15Q12870 199 aa8.84□□□□□ -1
VPS52-217ENST00000478934 CISD2Q8N5K1 135 aaKnown RBP8.84□□□□□ -1
VPS52-217ENST00000478934 STPG3Q8N7X2 389 aa8.84□□□□□ -1
VPS52-217ENST00000478934 SLC24A4Q8NFF2 622 aa8.84□□□□□ -1
VPS52-217ENST00000478934 OR4P4Q8NGL7 312 aa8.84□□□□□ -1
VPS52-217ENST00000478934 FAM222BQ8WU58 562 aa8.84□□□□□ -1
VPS52-217ENST00000478934 SFRP2Q96HF1 295 aa8.84□□□□□ -1
VPS52-217ENST00000478934 ABCA1O95477 2261 aa8.83□□□□□ -1
VPS52-217ENST00000478934 A0A0G2JNJ9 132 aa8.83□□□□□ -1
VPS52-217ENST00000478934 DPRXA6NFQ7 191 aa8.83□□□□□ -1
VPS52-217ENST00000478934 TGOLN2O43493 480 aa8.83□□□□□ -1
VPS52-217ENST00000478934 IGHV3-48P01763 117 aa8.83□□□□□ -1
VPS52-217ENST00000478934 CBLN1P23435 193 aa8.83□□□□□ -1
VPS52-217ENST00000478934 OPRK1P41145 380 aa8.83□□□□□ -1
VPS52-217ENST00000478934 HSPE1P61604 102 aaKnown RBP8.83□□□□□ -1
VPS52-217ENST00000478934 EFNB3Q15768 340 aa8.83□□□□□ -1
VPS52-217ENST00000478934 ZNF600Q6ZNG1 722 aa8.83□□□□□ -1
VPS52-217ENST00000478934 DMRTC2Q8IXT2 367 aaPredicted RBP8.83□□□□□ -1
VPS52-217ENST00000478934 LRFN3Q9BTN0 628 aa8.83□□□□□ -1
VPS52-217ENST00000478934 TMEM14BQ9NUH8 114 aa8.83□□□□□ -1
VPS52-217ENST00000478934 Q9UFV3 132 aa8.83□□□□□ -1
VPS52-217ENST00000478934 LSM4Q9Y4Z0 139 aaKnown RBP8.83□□□□□ -1
VPS52-217ENST00000478934 OR51B2Q9Y5P1 312 aa8.83□□□□□ -1
VPS52-217ENST00000478934 ASH1LQ9NR48 2969 aaKnown RBP8.83□□□□□ -1
VPS52-217ENST00000478934 IGKV1OR2-108A0A075B7D4 117 aa8.83□□□□□ -1
VPS52-217ENST00000478934 E7EUB6 86 aa8.83□□□□□ -1
VPS52-217ENST00000478934 K7EN84 100 aa8.83□□□□□ -1
VPS52-217ENST00000478934 PDE6DO43924 150 aa8.83□□□□□ -1
VPS52-217ENST00000478934 STAG3L2P0CL84 134 aa8.83□□□□□ -1
VPS52-217ENST00000478934 STAG3L3P0CL85 134 aa8.83□□□□□ -1
VPS52-217ENST00000478934 CEACAM8P31997 349 aaPredicted RBP8.83□□□□□ -1
VPS52-217ENST00000478934 ADMP35318 185 aa8.83□□□□□ -1
VPS52-217ENST00000478934 TIMP3P35625 211 aa8.83□□□□□ -1
VPS52-217ENST00000478934 GATA4P43694 442 aa8.83□□□□□ -1
VPS52-217ENST00000478934 CNN1P51911 297 aaKnown RBP8.83□□□□□ -1
VPS52-217ENST00000478934 RPL31P62899 125 aaKnown RBP8.83□□□□□ -1
VPS52-217ENST00000478934 SLC35B1P78383 322 aa8.83□□□□□ -1
VPS52-217ENST00000478934 SSX2Q16385 188 aa8.83□□□□□ -1
VPS52-217ENST00000478934 KCNIP4Q6PIL6 250 aa8.83□□□□□ -1
VPS52-217ENST00000478934 ZNF788Q6ZQV5 615 aa8.83□□□□□ -1
VPS52-217ENST00000478934 MIR17HGQ75NE6 70 aa8.83□□□□□ -1
VPS52-217ENST00000478934 DOLPP1Q86YN1 238 aa8.83□□□□□ -1
VPS52-217ENST00000478934 OR52E5Q8NH55 327 aa8.83□□□□□ -1
VPS52-217ENST00000478934 IL19Q9UHD0 177 aa8.83□□□□□ -1
VPS52-217ENST00000478934 MDFIC2A0A1B0GVS7 189 aa8.82□□□□□ -1
VPS52-217ENST00000478934 PRR30Q53SZ7 412 aaPredicted RBP8.82□□□□□ -1
VPS52-217ENST00000478934 LYPD2Q6UXB3 125 aa8.82□□□□□ -1
VPS52-217ENST00000478934 NEUROG1Q92886 237 aa8.82□□□□□ -1
VPS52-217ENST00000478934 MISP3Q96FF7 219 aa8.82□□□□□ -1
VPS52-217ENST00000478934 ABHD17AQ96GS6 310 aa8.82□□□□□ -1
VPS52-217ENST00000478934 NPVFQ9HCQ7 196 aa8.82□□□□□ -1
VPS52-217ENST00000478934 KCNIP2Q9NS61 270 aa8.82□□□□□ -1
VPS52-217ENST00000478934 CUL9Q8IWT3 2517 aa8.82□□□□□ -1
VPS52-217ENST00000478934 J3QR06 171 aa8.82□□□□□ -1
VPS52-217ENST00000478934 VENTXO95231 258 aa8.82□□□□□ -1
VPS52-217ENST00000478934 OR10J4P0C629 311 aa8.82□□□□□ -1
VPS52-217ENST00000478934 SRP14P37108 136 aaKnown RBP8.82□□□□□ -1
VPS52-217ENST00000478934 RAB7AP51149 207 aa8.82□□□□□ -1
VPS52-217ENST00000478934 RPL15P61313 204 aaKnown RBP8.82□□□□□ -1
VPS52-217ENST00000478934 RPP30P78346 268 aaKnown RBP8.82□□□□□ -1
VPS52-217ENST00000478934 BSPH1Q075Z2 132 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 214.7 ms