RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 STPG4Q8N801 248 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 KNDC1Q76NI1 1749 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 IGKV3-7A0A075B6H7 116 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 MPC2O95563 127 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 IGHG4P01861 327 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 THBDP07204 575 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 CELA3AP09093 270 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 EVX1P49640 407 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 PRCDQ00LT1 54 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 EIF4EBP2Q13542 120 aaPredicted RBP4.66□□□□□ -1.66
USF3-202ENST00000478658 C3AR1Q16581 482 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 LINC01620Q4KN68 170 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 DCAF10Q5QP82 559 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 ZAR1LA6NP61 321 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 SPSB3Q6PJ21 355 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 C20orf204Q6ZNR8 217 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 TRPT1Q86TN4 253 aaKnown RBP4.66□□□□□ -1.66
USF3-202ENST00000478658 ARRDC1-AS1Q9H2J1 176 aa4.66□□□□□ -1.66
USF3-202ENST00000478658 ICOSLGO75144 302 aa4.65□□□□□ -1.66
USF3-202ENST00000478658 SBF1O95248 1867 aa4.65□□□□□ -1.66
USF3-202ENST00000478658 CLDN14O95500 239 aa4.65□□□□□ -1.66
USF3-202ENST00000478658 SAA1P0DJI8 122 aaPredicted RBP4.65□□□□□ -1.66
USF3-202ENST00000478658 CFPP27918 469 aa4.65□□□□□ -1.66
USF3-202ENST00000478658 C2orf82Q6UX34 121 aa4.65□□□□□ -1.66
USF3-202ENST00000478658 NKAIN4Q8IVV8 208 aa4.65□□□□□ -1.66
USF3-202ENST00000478658 COQ2Q96H96 371 aa4.65□□□□□ -1.66
USF3-202ENST00000478658 BCORQ6W2J9 1755 aa4.65□□□□□ -1.66
USF3-202ENST00000478658 ZNF142P52746 1687 aaPredicted RBP4.65□□□□□ -1.66
USF3-202ENST00000478658 MBLAC1A4D2B0 266 aaPredicted RBP4.65□□□□□ -1.66
USF3-202ENST00000478658 J3KRW8 73 aa4.65□□□□□ -1.66
USF3-202ENST00000478658 ADMP35318 185 aa4.65□□□□□ -1.66
USF3-202ENST00000478658 PTPRZ1P23471 2315 aaPredicted RBP4.65□□□□□ -1.66
USF3-202ENST00000478658 C1QTNF9P0C862 333 aa4.65□□□□□ -1.66
USF3-202ENST00000478658 SNHG28P0DPA3 235 aa4.65□□□□□ -1.66
USF3-202ENST00000478658 IL17CQ9P0M4 197 aa4.65□□□□□ -1.66
USF3-202ENST00000478658 B9D1Q9UPM9 204 aa4.65□□□□□ -1.66
USF3-202ENST00000478658 TMEM131LA2VDJ0 1609 aa4.65□□□□□ -1.66
USF3-202ENST00000478658 A0A0U1RQV5 110 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 SPINK4O60575 86 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 ESDP10768 282 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 CD70P32970 193 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 HSPE1P61604 102 aaKnown RBP4.65□□□□□ -1.67
USF3-202ENST00000478658 KLRD1Q13241 179 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 FBXW9Q5XUX1 488 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 C3orf56Q8N813 242 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 IDI2-AS1Q9NZ38 188 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 ROBO1Q9Y6N7 1651 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 A0A1W2PQD3 144 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 EML2O95834 649 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 ISG15P05161 165 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 SRP19P09132 144 aaKnown RBP4.65□□□□□ -1.67
USF3-202ENST00000478658 GNLYP22749 145 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 TMEM187Q14656 261 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 ACER2Q5QJU3 275 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 BVES-AS1Q5T3Y7 98 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 USMG5Q96IX5 58 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 MYLKQ15746 1914 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 PLCH1Q4KWH8 1693 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 FOCADQ5VW36 1801 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 C3orf80F5H4A9 247 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 ZNF750Q32MQ0 723 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 OSR1Q8TAX0 266 aaPredicted RBP4.65□□□□□ -1.67
USF3-202ENST00000478658 TMEM255BQ8WV15 326 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 WNT2BQ93097 391 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 LRP12Q9Y561 859 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 LRRK1Q38SD2 2015 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 TMEM131Q92545 1883 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 COL6A6A6NMZ7 2263 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 NBL1P41271 181 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 FER1L6-AS1Q8NA97 138 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 SVIPQ8NHG7 77 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 DKK4Q9UBT3 224 aa4.65□□□□□ -1.67
USF3-202ENST00000478658 KLK5Q9Y337 293 aaPredicted RBP4.65□□□□□ -1.67
USF3-202ENST00000478658 KLK8O60259 260 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 SUPT4H1P63272 117 aaKnown RBP4.64□□□□□ -1.67
USF3-202ENST00000478658 SRSF12Q8WXF0 261 aaKnown RBP4.64□□□□□ -1.67
USF3-202ENST00000478658 TM4SF18Q96CE8 201 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 WNT10AQ9GZT5 417 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 RPL36A-HNRNPH2H7BZ11 118 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 HTN3P15516 51 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 RAE1P78406 368 aaKnown RBP4.64□□□□□ -1.67
USF3-202ENST00000478658 TNFRSF9Q07011 255 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 FAM182BQ5T319 152 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 PRSS42Q7Z5A4 293 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 CICQ96RK0 1608 aaPredicted RBP4.64□□□□□ -1.67
USF3-202ENST00000478658 TRPM3Q9HCF6 1732 aaPredicted RBP4.64□□□□□ -1.67
USF3-202ENST00000478658 BTAF1O14981 1849 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 FABP5P3A8MUU1 101 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 OOSP1A8MZH6 123 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 TBX6O95947 436 aaPredicted RBP4.64□□□□□ -1.67
USF3-202ENST00000478658 PPYP01298 95 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 COL9A1P20849 921 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 NKAIN2Q5VXU1 208 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 DDA1Q9BW61 102 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 SSBP3Q9BWW4 388 aaPredicted RBP4.64□□□□□ -1.67
USF3-202ENST00000478658 SPTA1P02549 2419 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 IGHV3-9P01782 118 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 OR9G9P0C7N8 305 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 NPC2P61916 151 aa4.64□□□□□ -1.67
USF3-202ENST00000478658 FAM78AQ5JUQ0 283 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms