RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ZNF257Q9Y2Q1 563 aa20.83■□□□□ 0.93
CCM2-211ENST00000478582 PIGBOS1A0A0B4J2F0 54 aa20.82■□□□□ 0.92
CCM2-211ENST00000478582 DBX1A6NMT0 343 aa20.82■□□□□ 0.92
CCM2-211ENST00000478582 CRYGCP07315 174 aa20.82■□□□□ 0.92
CCM2-211ENST00000478582 TRAPPC2P0DI81 140 aa20.82■□□□□ 0.92
CCM2-211ENST00000478582 TRAPPC2BP0DI82 140 aa20.82■□□□□ 0.92
CCM2-211ENST00000478582 ZNF429Q86V71 674 aa20.82■□□□□ 0.92
CCM2-211ENST00000478582 CASTOR1Q8WTX7 329 aa20.82■□□□□ 0.92
CCM2-211ENST00000478582 LSM10Q969L4 123 aaKnown RBP20.82■□□□□ 0.92
CCM2-211ENST00000478582 FLVCR2Q9UPI3 526 aa20.82■□□□□ 0.92
CCM2-211ENST00000478582 A0A0B4J293 547 aa20.81■□□□□ 0.92
CCM2-211ENST00000478582 IGLC7A0M8Q6 106 aa20.81■□□□□ 0.92
CCM2-211ENST00000478582 SFT2D2O95562 160 aa20.81■□□□□ 0.92
CCM2-211ENST00000478582 PPP1R1AQ13522 171 aa20.81■□□□□ 0.92
CCM2-211ENST00000478582 MZT2BQ6NZ67 158 aa20.81■□□□□ 0.92
CCM2-211ENST00000478582 C18orf65Q6ZTR6 163 aa20.81■□□□□ 0.92
CCM2-211ENST00000478582 HSD17B13Q7Z5P4 300 aaPredicted RBP20.81■□□□□ 0.92
CCM2-211ENST00000478582 LGI3Q8N145 548 aa20.81■□□□□ 0.92
CCM2-211ENST00000478582 MS4A10Q96PG2 267 aa20.81■□□□□ 0.92
CCM2-211ENST00000478582 ZNF355PQ9NSJ1 428 aa20.81■□□□□ 0.92
CCM2-211ENST00000478582 COA4Q9NYJ1 87 aa20.81■□□□□ 0.92
CCM2-211ENST00000478582 A0A0G2JRQ6 117 aa20.8■□□□□ 0.92
CCM2-211ENST00000478582 TRGV3P03979 118 aa20.8■□□□□ 0.92
CCM2-211ENST00000478582 TCRBP04435 133 aa20.8■□□□□ 0.92
CCM2-211ENST00000478582 AREGP15514 252 aa20.8■□□□□ 0.92
CCM2-211ENST00000478582 VAMP1P23763 118 aa20.8■□□□□ 0.92
CCM2-211ENST00000478582 PSMB6P28072 239 aa20.8■□□□□ 0.92
CCM2-211ENST00000478582 TPPP2P59282 170 aa20.8■□□□□ 0.92
CCM2-211ENST00000478582 IZUMO4Q1ZYL8 232 aa20.8■□□□□ 0.92
CCM2-211ENST00000478582 KLK9Q2XQG4 91 aa20.8■□□□□ 0.92
CCM2-211ENST00000478582 LRTM2Q8N967 370 aa20.8■□□□□ 0.92
CCM2-211ENST00000478582 KLHL30-AS1Q8NEE0 82 aa20.8■□□□□ 0.92
CCM2-211ENST00000478582 C4orf3Q8WVX3 66 aa20.8■□□□□ 0.92
CCM2-211ENST00000478582 ALX4Q9H161 411 aaPredicted RBP20.8■□□□□ 0.92
CCM2-211ENST00000478582 PRR13Q9NZ81 148 aa20.8■□□□□ 0.92
CCM2-211ENST00000478582 KLK9Q9UKQ9 250 aa20.8■□□□□ 0.92
CCM2-211ENST00000478582 A0A0B4J2A0 478 aa20.79■□□□□ 0.92
CCM2-211ENST00000478582 NUDT19A8MXV4 375 aa20.79■□□□□ 0.92
CCM2-211ENST00000478582 CTRB1P17538 263 aa20.79■□□□□ 0.92
CCM2-211ENST00000478582 HSPE1P61604 102 aaKnown RBP20.79■□□□□ 0.92
CCM2-211ENST00000478582 RUNX1Q01196 453 aa20.79■□□□□ 0.92
CCM2-211ENST00000478582 CTRB2Q6GPI1 263 aa20.79■□□□□ 0.92
CCM2-211ENST00000478582 SLC35G3Q8N808 338 aa20.79■□□□□ 0.92
CCM2-211ENST00000478582 RNASE11Q8TAA1 199 aaKnown RBP20.79■□□□□ 0.92
CCM2-211ENST00000478582 SHPKQ9UHJ6 478 aa20.79■□□□□ 0.92
CCM2-211ENST00000478582 TRBV9A0A0B4J1U6 114 aa20.78■□□□□ 0.92
CCM2-211ENST00000478582 DUXBA0A1W2PPF3 345 aa20.78■□□□□ 0.92
CCM2-211ENST00000478582 AARDQ4LEZ3 155 aa20.78■□□□□ 0.92
CCM2-211ENST00000478582 Q6ZRM9 215 aa20.78■□□□□ 0.92
CCM2-211ENST00000478582 C8orf86Q6ZUL3 223 aa20.78■□□□□ 0.92
CCM2-211ENST00000478582 OR10W1Q8NGF6 305 aa20.78■□□□□ 0.92
CCM2-211ENST00000478582 GPR146Q96CH1 333 aa20.78■□□□□ 0.92
CCM2-211ENST00000478582 C20orf85Q9H1P6 137 aa20.78■□□□□ 0.92
CCM2-211ENST00000478582 GNB4Q9HAV0 340 aa20.78■□□□□ 0.92
CCM2-211ENST00000478582 NOTCH1P46531 2555 aa20.77■□□□□ 0.92
CCM2-211ENST00000478582 FAM240BA0A1B0GVZ2 78 aa20.77■□□□□ 0.92
CCM2-211ENST00000478582 I3L521 148 aa20.77■□□□□ 0.92
CCM2-211ENST00000478582 RBMXL2O75526 392 aaKnown RBP20.77■□□□□ 0.92
CCM2-211ENST00000478582 OR4E1P0C645 316 aa20.77■□□□□ 0.92
CCM2-211ENST00000478582 ANKRD55Q3KP44 614 aa20.77■□□□□ 0.92
CCM2-211ENST00000478582 PDLIM3Q53GG5 364 aaPredicted RBP20.77■□□□□ 0.92
CCM2-211ENST00000478582 USMG5Q96IX5 58 aa20.77■□□□□ 0.92
CCM2-211ENST00000478582 A0A0G2JLM5 398 aa20.76■□□□□ 0.91
CCM2-211ENST00000478582 C9orf170A2RU37 121 aa20.76■□□□□ 0.91
CCM2-211ENST00000478582 DHFRP00374 187 aa20.76■□□□□ 0.91
CCM2-211ENST00000478582 ANXA7P20073 488 aaKnown RBP20.76■□□□□ 0.91
CCM2-211ENST00000478582 PRCDQ00LT1 54 aa20.76■□□□□ 0.91
CCM2-211ENST00000478582 WT1-ASQ06250 92 aa20.76■□□□□ 0.91
CCM2-211ENST00000478582 LYZL2Q7Z4W2 148 aa20.76■□□□□ 0.91
CCM2-211ENST00000478582 C1QL4Q86Z23 238 aa20.76■□□□□ 0.91
CCM2-211ENST00000478582 HINT2Q9BX68 163 aa20.76■□□□□ 0.91
CCM2-211ENST00000478582 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.76■□□□□ 0.91
CCM2-211ENST00000478582 ST8SIA3O43173 380 aa20.75■□□□□ 0.91
CCM2-211ENST00000478582 MYCNOSP40205 109 aa20.75■□□□□ 0.91
CCM2-211ENST00000478582 NMSQ5H8A3 153 aa20.75■□□□□ 0.91
CCM2-211ENST00000478582 ETV3LQ6ZN32 361 aa20.75■□□□□ 0.91
CCM2-211ENST00000478582 FANCD2OSQ96PS1 177 aa20.75■□□□□ 0.91
CCM2-211ENST00000478582 FAM223BA6NKX1 122 aa20.74■□□□□ 0.91
CCM2-211ENST00000478582 HLA-AP01891 365 aaKnown RBP20.74■□□□□ 0.91
CCM2-211ENST00000478582 PRH1P02810 166 aa20.74■□□□□ 0.91
CCM2-211ENST00000478582 OR13C7P0DN81 318 aa20.74■□□□□ 0.91
CCM2-211ENST00000478582 MECP2P51608 486 aaKnown RBP20.74■□□□□ 0.91
CCM2-211ENST00000478582 RAB25P57735 213 aa20.74■□□□□ 0.91
CCM2-211ENST00000478582 DHRS2Q13268 280 aa20.74■□□□□ 0.91
CCM2-211ENST00000478582 LYG2Q86SG7 212 aa20.74■□□□□ 0.91
CCM2-211ENST00000478582 FAM223AQ8IWN6 122 aa20.74■□□□□ 0.91
CCM2-211ENST00000478582 OR52E5Q8NH55 327 aa20.74■□□□□ 0.91
CCM2-211ENST00000478582 RAX2Q96IS3 184 aa20.74■□□□□ 0.91
CCM2-211ENST00000478582 NUDT15Q9NV35 164 aa20.74■□□□□ 0.91
CCM2-211ENST00000478582 CACNG5Q9UF02 275 aa20.74■□□□□ 0.91
CCM2-211ENST00000478582 C13orf42A0A1B0GVH6 325 aa20.73■□□□□ 0.91
CCM2-211ENST00000478582 G3V4G9 280 aa20.73■□□□□ 0.91
CCM2-211ENST00000478582 REG1AP05451 166 aa20.73■□□□□ 0.91
CCM2-211ENST00000478582 LGALS1P09382 135 aaKnown RBP20.73■□□□□ 0.91
CCM2-211ENST00000478582 HIST1H1BP16401 226 aaKnown RBP20.73■□□□□ 0.91
CCM2-211ENST00000478582 RHOGP84095 191 aa20.73■□□□□ 0.91
CCM2-211ENST00000478582 SAMD5Q5TGI4 173 aa20.73■□□□□ 0.91
CCM2-211ENST00000478582 MRPL41Q8IXM3 137 aaKnown RBP20.73■□□□□ 0.91
CCM2-211ENST00000478582 NECAP1Q8NC96 275 aa20.73■□□□□ 0.91
CCM2-211ENST00000478582 P2RX4Q99571 388 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms