RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 SCGB3A2Q96PL1 93 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 QTRT1Q9BXR0 403 aaKnown RBP5.36□□□□□ -1.55
BRCA1-215ENST00000478531 SLA2Q9H6Q3 261 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 AKIP1Q9NQ31 210 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 BATF3Q9NR55 127 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 FAM212BQ9NTI7 297 aaPredicted RBP5.36□□□□□ -1.55
BRCA1-215ENST00000478531 PRR13Q9NZ81 148 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 PTTG2Q9NZH5 202 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 GPR132Q9UNW8 380 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 OR51B2Q9Y5P1 312 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 C13orf42A0A1B0GVH6 325 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 CRYM-AS1A6NIL9 109 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 CCL24O00175 119 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 SLC6A1P30531 599 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 MECP2P51608 486 aaKnown RBP5.35□□□□□ -1.55
BRCA1-215ENST00000478531 KIAA0141Q14154 515 aaPredicted RBP5.35□□□□□ -1.55
BRCA1-215ENST00000478531 SGPP2Q8IWX5 399 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 MRPL41Q8IXM3 137 aaKnown RBP5.35□□□□□ -1.55
BRCA1-215ENST00000478531 OR10W1Q8NGF6 305 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 TMEM230Q96A57 120 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 TMEM222Q9H0R3 208 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 ANKRD34BA5PLL1 514 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 CGB1A6NKQ9 187 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 DBX1A6NMT0 343 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 C15orf61A6NNL5 157 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 CENPXA8MT69 81 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 G3V4G9 280 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 H3BUA1 57 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 I3L521 148 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 IGKV1-5P01602 117 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 LGALS1P09382 135 aaKnown RBP5.35□□□□□ -1.55
BRCA1-215ENST00000478531 DEFA4P12838 97 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 UCP1P25874 307 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 RHOGP84095 191 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 RBMS2Q15434 407 aaKnown RBP5.35□□□□□ -1.55
BRCA1-215ENST00000478531 SPINK9Q5DT21 86 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 SLC25A42Q86VD7 318 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 TTC9CQ8N5M4 171 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 LINC00482Q8N8I6 264 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 OR1L8Q8NGR8 309 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 LHFPL5Q8TAF8 219 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 DEDD2Q8WXF8 326 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 RRNAD1Q96FB5 475 aaKnown RBP5.35□□□□□ -1.55
BRCA1-215ENST00000478531 TSC22D3Q99576 134 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 PRNDQ9UKY0 176 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 ZNF257Q9Y2Q1 563 aa5.35□□□□□ -1.55
BRCA1-215ENST00000478531 IGHV4OR15-8A0A075B7B6 117 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 A0A087WW49 117 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 A0A0G2JLM5 398 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 A0A0G2JRQ6 117 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 TEX50A0A1B0GTY4 177 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 IGLC7A0M8Q6 106 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 NPIPB5A8MRT5 1133 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 OR2J3O76001 311 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 ATG12O94817 140 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 TRAPPC2P0DI81 140 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 TRAPPC2BP0DI82 140 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 OR13C7P0DN81 318 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 IGLL1P15814 213 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 PSMB6P28072 239 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 MYCNOSP40205 109 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 ZNF616Q08AN1 781 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 ODF1Q14990 250 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 OXLD1Q5BKU9 147 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 C4orf48Q5BLP8 95 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 TMEM268Q5VZI3 342 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 OR1N2Q8NGR9 330 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 GLYATL2Q8WU03 294 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 S100ZQ8WXG8 99 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 DPF1Q92782 380 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 RBPMSQ93062 196 aaKnown RBP5.34□□□□□ -1.55
BRCA1-215ENST00000478531 P2RX4Q99571 388 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 SLC25A21Q9BQT8 299 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-215ENST00000478531 TMEM14BQ9NUH8 114 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 KCNIP3Q9Y2W7 256 aa5.34□□□□□ -1.55
BRCA1-215ENST00000478531 NAP1L6A6NFF2 107 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 LINC01619G3V211 115 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 CDS2O95674 445 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 DHFRP00374 187 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 IGHV3-23P01764 117 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 FGF2P09038 288 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 OR8U8P0C7N1 319 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 ANXA3P12429 323 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 CTRB1P17538 263 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 BTCP35070 178 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 SLURP1P55000 103 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 SUPT4H1P63272 117 aaKnown RBP5.33□□□□□ -1.56
BRCA1-215ENST00000478531 DHODHQ02127 395 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 WT1-ASQ06250 92 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 EXOSC2Q13868 293 aaKnown RBP5.33□□□□□ -1.56
BRCA1-215ENST00000478531 TMEM187Q14656 261 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 C15orf32Q32M92 178 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 CTRB2Q6GPI1 263 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 SELENOHQ8IZQ5 122 aaKnown RBP5.33□□□□□ -1.56
BRCA1-215ENST00000478531 CENPSQ8N2Z9 138 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 OR5B3Q8NH48 314 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 LSM10Q969L4 123 aaKnown RBP5.33□□□□□ -1.56
BRCA1-215ENST00000478531 PDCD10Q9BUL8 212 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 NDUFA4L2Q9NRX3 87 aa5.33□□□□□ -1.56
BRCA1-215ENST00000478531 FKBP11Q9NYL4 201 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms