RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 CCDC71LQ8N9Z2 235 aa11.96□□□□□ -0.49
HMGA1-206ENST00000478214 OR51S1Q8NGJ8 323 aa11.96□□□□□ -0.49
HMGA1-206ENST00000478214 SRSF8Q9BRL6 282 aaKnown RBP11.96□□□□□ -0.49
HMGA1-206ENST00000478214 THAP7Q9BT49 309 aaPredicted RBP11.96□□□□□ -0.49
HMGA1-206ENST00000478214 HINT2Q9BX68 163 aa11.96□□□□□ -0.49
HMGA1-206ENST00000478214 FBXL7Q9UJT9 491 aa11.96□□□□□ -0.49
HMGA1-206ENST00000478214 OR51B2Q9Y5P1 312 aa11.96□□□□□ -0.49
HMGA1-206ENST00000478214 C3orf85A0A1B0GTC6 90 aa11.95□□□□□ -0.5
HMGA1-206ENST00000478214 DBX1A6NMT0 343 aa11.95□□□□□ -0.5
HMGA1-206ENST00000478214 DHFRP00374 187 aa11.95□□□□□ -0.5
HMGA1-206ENST00000478214 DEFA4P12838 97 aa11.95□□□□□ -0.5
HMGA1-206ENST00000478214 ECI1P42126 302 aa11.95□□□□□ -0.5
HMGA1-206ENST00000478214 INSL3P51460 131 aa11.95□□□□□ -0.5
HMGA1-206ENST00000478214 WT1-ASQ06250 92 aa11.95□□□□□ -0.5
HMGA1-206ENST00000478214 KLK9Q2XQG4 91 aa11.95□□□□□ -0.5
HMGA1-206ENST00000478214 SP6Q3SY56 376 aa11.95□□□□□ -0.5
HMGA1-206ENST00000478214 ACSM6Q6P461 480 aa11.95□□□□□ -0.5
HMGA1-206ENST00000478214 TSC22D3Q99576 134 aa11.95□□□□□ -0.5
HMGA1-206ENST00000478214 PRRT1Q99946 306 aa11.95□□□□□ -0.5
HMGA1-206ENST00000478214 RTBDNQ9BSG5 229 aaPredicted RBP11.95□□□□□ -0.5
HMGA1-206ENST00000478214 NDUFA4L2Q9NRX3 87 aa11.95□□□□□ -0.5
HMGA1-206ENST00000478214 ZMAT5Q9UDW3 170 aaKnown RBP11.95□□□□□ -0.5
HMGA1-206ENST00000478214 KLK9Q9UKQ9 250 aa11.95□□□□□ -0.5
HMGA1-206ENST00000478214 PRNDQ9UKY0 176 aa11.95□□□□□ -0.5
HMGA1-206ENST00000478214 IGLV11-55A0A075B6I3 123 aa11.94□□□□□ -0.5
HMGA1-206ENST00000478214 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.94□□□□□ -0.5
HMGA1-206ENST00000478214 C15orf61A6NNL5 157 aa11.94□□□□□ -0.5
HMGA1-206ENST00000478214 BMPR1BO00238 502 aa11.94□□□□□ -0.5
HMGA1-206ENST00000478214 OR13C7P0DN81 318 aa11.94□□□□□ -0.5
HMGA1-206ENST00000478214 KLF5Q13887 457 aaPredicted RBP11.94□□□□□ -0.5
HMGA1-206ENST00000478214 SURF2Q15527 256 aaPredicted RBP11.94□□□□□ -0.5
HMGA1-206ENST00000478214 ZNF79Q15937 498 aa11.94□□□□□ -0.5
HMGA1-206ENST00000478214 IZUMO4Q1ZYL8 232 aa11.94□□□□□ -0.5
HMGA1-206ENST00000478214 THOC7Q6I9Y2 204 aaKnown RBP11.94□□□□□ -0.5
HMGA1-206ENST00000478214 H2BFWTQ7Z2G1 175 aa11.94□□□□□ -0.5
HMGA1-206ENST00000478214 ZNF429Q86V71 674 aa11.94□□□□□ -0.5
HMGA1-206ENST00000478214 Q8N402 240 aa11.94□□□□□ -0.5
HMGA1-206ENST00000478214 TRIM63Q969Q1 353 aa11.94□□□□□ -0.5
HMGA1-206ENST00000478214 C5orf66Q9H5L9 145 aa11.94□□□□□ -0.5
HMGA1-206ENST00000478214 TMEM14BQ9NUH8 114 aa11.94□□□□□ -0.5
HMGA1-206ENST00000478214 MCUBQ9NWR8 336 aa11.94□□□□□ -0.5
HMGA1-206ENST00000478214 SLC2A8Q9NY64 477 aa11.94□□□□□ -0.5
HMGA1-206ENST00000478214 FKBP11Q9NYL4 201 aa11.94□□□□□ -0.5
HMGA1-206ENST00000478214 GPR132Q9UNW8 380 aa11.94□□□□□ -0.5
HMGA1-206ENST00000478214 C14orf166Q9Y224 244 aaKnown RBP11.94□□□□□ -0.5
HMGA1-206ENST00000478214 DMRT1Q9Y5R6 373 aa11.94□□□□□ -0.5
HMGA1-206ENST00000478214 S4R3C0 116 aa11.94□□□□□ -0.5
HMGA1-206ENST00000478214 IGKV1-5P01602 117 aa11.93□□□□□ -0.5
HMGA1-206ENST00000478214 IGHV3-23P01764 117 aa11.93□□□□□ -0.5
HMGA1-206ENST00000478214 HIST1H1BP16401 226 aaKnown RBP11.93□□□□□ -0.5
HMGA1-206ENST00000478214 SYNJ2BPP57105 145 aa11.93□□□□□ -0.5
HMGA1-206ENST00000478214 KLF9Q13886 244 aaPredicted RBP11.93□□□□□ -0.5
HMGA1-206ENST00000478214 RPEL1Q2QD12 228 aa11.93□□□□□ -0.5
HMGA1-206ENST00000478214 TRIM16LQ309B1 348 aa11.93□□□□□ -0.5
HMGA1-206ENST00000478214 OR5B3Q8NH48 314 aa11.93□□□□□ -0.5
HMGA1-206ENST00000478214 OR4A16Q8NH70 328 aa11.93□□□□□ -0.5
HMGA1-206ENST00000478214 LSM10Q969L4 123 aaKnown RBP11.93□□□□□ -0.5
HMGA1-206ENST00000478214 PRR25Q96S07 402 aa11.93□□□□□ -0.5
HMGA1-206ENST00000478214 MFSD2BA6NFX1 497 aa11.92□□□□□ -0.5
HMGA1-206ENST00000478214 PPP5D1E7EU14 171 aa11.92□□□□□ -0.5
HMGA1-206ENST00000478214 UCP1P25874 307 aa11.92□□□□□ -0.5
HMGA1-206ENST00000478214 AKR1C2P52895 323 aa11.92□□□□□ -0.5
HMGA1-206ENST00000478214 DEFB121Q5J5C9 76 aa11.92□□□□□ -0.5
HMGA1-206ENST00000478214 HSD17B13Q7Z5P4 300 aaPredicted RBP11.92□□□□□ -0.5
HMGA1-206ENST00000478214 GDPD1Q8N9F7 314 aa11.92□□□□□ -0.5
HMGA1-206ENST00000478214 OR6Q1Q8NGQ2 317 aa11.92□□□□□ -0.5
HMGA1-206ENST00000478214 CCDC140Q96MF4 163 aa11.92□□□□□ -0.5
HMGA1-206ENST00000478214 OR4C12Q96R67 309 aa11.92□□□□□ -0.5
HMGA1-206ENST00000478214 ELOVL1Q9BW60 279 aa11.92□□□□□ -0.5
HMGA1-206ENST00000478214 NAA60Q9H7X0 242 aa11.92□□□□□ -0.5
HMGA1-206ENST00000478214 SCP2D1Q9UJQ7 156 aa11.92□□□□□ -0.5
HMGA1-206ENST00000478214 TEX13DA0A0J9YY54 714 aaPredicted RBP11.91□□□□□ -0.5
HMGA1-206ENST00000478214 HLA-AP01891 365 aaKnown RBP11.91□□□□□ -0.5
HMGA1-206ENST00000478214 OR5AC1P0C628 307 aa11.91□□□□□ -0.5
HMGA1-206ENST00000478214 P0C879 139 aa11.91□□□□□ -0.5
HMGA1-206ENST00000478214 ETV6P41212 452 aa11.91□□□□□ -0.5
HMGA1-206ENST00000478214 SPANXN2Q5MJ10 180 aa11.91□□□□□ -0.5
HMGA1-206ENST00000478214 CLEC19AQ6UXS0 136 aa11.91□□□□□ -0.5
HMGA1-206ENST00000478214 IL34Q6ZMJ4 242 aa11.91□□□□□ -0.5
HMGA1-206ENST00000478214 HAPLN4Q86UW8 402 aa11.91□□□□□ -0.5
HMGA1-206ENST00000478214 OR9G4Q8NGQ1 327 aa11.91□□□□□ -0.5
HMGA1-206ENST00000478214 EEF1AKMT3Q96AZ1 226 aa11.91□□□□□ -0.5
HMGA1-206ENST00000478214 TMEM56Q96MV1 263 aa11.91□□□□□ -0.5
HMGA1-206ENST00000478214 TMEM222Q9H0R3 208 aa11.91□□□□□ -0.5
HMGA1-206ENST00000478214 NDUFA13Q9P0J0 144 aa11.91□□□□□ -0.5
HMGA1-206ENST00000478214 ZNF256Q9Y2P7 627 aaPredicted RBP11.91□□□□□ -0.5
HMGA1-206ENST00000478214 A0A0B4J293 547 aa11.9□□□□□ -0.5
HMGA1-206ENST00000478214 A0A0G2JRQ6 117 aa11.9□□□□□ -0.5
HMGA1-206ENST00000478214 CRYM-AS1A6NIL9 109 aa11.9□□□□□ -0.5
HMGA1-206ENST00000478214 B3GALNT1O75752 331 aa11.9□□□□□ -0.5
HMGA1-206ENST00000478214 ATG12O94817 140 aa11.9□□□□□ -0.5
HMGA1-206ENST00000478214 LY86O95711 162 aa11.9□□□□□ -0.5
HMGA1-206ENST00000478214 MECP2P51608 486 aaKnown RBP11.9□□□□□ -0.5
HMGA1-206ENST00000478214 MFAP2P55001 183 aa11.9□□□□□ -0.5
HMGA1-206ENST00000478214 AP3S2P59780 193 aa11.9□□□□□ -0.5
HMGA1-206ENST00000478214 HSPE1P61604 102 aaKnown RBP11.9□□□□□ -0.5
HMGA1-206ENST00000478214 TATDN3Q17R31 274 aa11.9□□□□□ -0.5
HMGA1-206ENST00000478214 FAM209BQ5JX69 171 aa11.9□□□□□ -0.5
HMGA1-206ENST00000478214 SLC25A24Q6NUK1 477 aa11.9□□□□□ -0.5
HMGA1-206ENST00000478214 TOMM5Q8N4H5 51 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms