RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 A0A0G2JRQ6 117 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 TEX50A0A1B0GTY4 177 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 C13orf42A0A1B0GVH6 325 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 IGLC7A0M8Q6 106 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 C15orf61A6NNL5 157 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 G3V4G9 280 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 FAM229AH3BQW9 127 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 LGALS1P09382 135 aaKnown RBP7.95□□□□□ -1.14
HDAC6-222ENST00000478095 TRAPPC2P0DI81 140 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 TRAPPC2BP0DI82 140 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 IGLL1P15814 213 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 RHOGP84095 191 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 TMEM268Q5VZI3 342 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 SGPP2Q8IWX5 399 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 OR10W1Q8NGF6 305 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 OR1N2Q8NGR9 330 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 OR4A16Q8NH70 328 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 RNASE11Q8TAA1 199 aaKnown RBP7.95□□□□□ -1.14
HDAC6-222ENST00000478095 GLYATL2Q8WU03 294 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 DEDD2Q8WXF8 326 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 TSC22D3Q99576 134 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 PRNDQ9UKY0 176 aa7.95□□□□□ -1.14
HDAC6-222ENST00000478095 PLXNB1O43157 2135 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 IGHV4OR15-8A0A075B7B6 117 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 A0A087WW49 117 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 ANKRD34BA5PLL1 514 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 NPIPB5A8MRT5 1133 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 B3GALNT1O75752 331 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 OR2J3O76001 311 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 CTRB1P17538 263 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 PSMB6P28072 239 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 SUPT4H1P63272 117 aaKnown RBP7.94□□□□□ -1.14
HDAC6-222ENST00000478095 RUNX1Q01196 453 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 DHODHQ02127 395 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 FHL3Q13643 280 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 RBMS2Q15434 407 aaKnown RBP7.94□□□□□ -1.14
HDAC6-222ENST00000478095 SPINK9Q5DT21 86 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 CTRB2Q6GPI1 263 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 SLC25A42Q86VD7 318 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 OR1L8Q8NGR8 309 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 SLC25A21Q9BQT8 299 aaPredicted RBP7.94□□□□□ -1.14
HDAC6-222ENST00000478095 TMEM14BQ9NUH8 114 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 ZNF257Q9Y2Q1 563 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 S4R3C0 116 aa7.94□□□□□ -1.14
HDAC6-222ENST00000478095 A0A0B4J293 547 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 A0A0G2JLM5 398 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 NAP1L6A6NFF2 107 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 CENPXA8MT69 81 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 PLA2G10O15496 165 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 ATG12O94817 140 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 CDS2O95674 445 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 GHRHP01286 108 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 CRYGCP07315 174 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 FGF2P09038 288 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 P0C879 139 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 OR13C7P0DN81 318 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 DEFA4P12838 97 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 VAMP1P23763 118 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 BTCP35070 178 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 MECP2P51608 486 aaKnown RBP7.93□□□□□ -1.14
HDAC6-222ENST00000478095 SLURP1P55000 103 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 WT1-ASQ06250 92 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 ZNF616Q08AN1 781 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 EXOSC2Q13868 293 aaKnown RBP7.93□□□□□ -1.14
HDAC6-222ENST00000478095 TMEM187Q14656 261 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 SELENOHQ8IZQ5 122 aaKnown RBP7.93□□□□□ -1.14
HDAC6-222ENST00000478095 CADM3Q8N126 398 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 SLC35G3Q8N808 338 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 WFDC9Q8NEX5 89 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 OR5B3Q8NH48 314 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 S100ZQ8WXG8 99 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 DPF1Q92782 380 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 RBPMSQ93062 196 aaKnown RBP7.93□□□□□ -1.14
HDAC6-222ENST00000478095 LSM10Q969L4 123 aaKnown RBP7.93□□□□□ -1.14
HDAC6-222ENST00000478095 RRNAD1Q96FB5 475 aaKnown RBP7.93□□□□□ -1.14
HDAC6-222ENST00000478095 GALNT14Q96FL9 552 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 FANCD2OSQ96PS1 177 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 CCDC32Q9BV29 185 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 NDUFA4L2Q9NRX3 87 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 FKBP11Q9NYL4 201 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 FBXL7Q9UJT9 491 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 FLVCR2Q9UPI3 526 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 KCNIP3Q9Y2W7 256 aa7.93□□□□□ -1.14
HDAC6-222ENST00000478095 PKD1L1Q8TDX9 2849 aa7.92□□□□□ -1.14
HDAC6-222ENST00000478095 TRBV9A0A0B4J1U6 114 aa7.92□□□□□ -1.14
HDAC6-222ENST00000478095 FAM223BA6NKX1 122 aa7.92□□□□□ -1.14
HDAC6-222ENST00000478095 LINC01619G3V211 115 aa7.92□□□□□ -1.14
HDAC6-222ENST00000478095 NDUFB6O95139 128 aa7.92□□□□□ -1.14
HDAC6-222ENST00000478095 NDUFB8O95169 186 aa7.92□□□□□ -1.14
HDAC6-222ENST00000478095 BRI3O95415 125 aa7.92□□□□□ -1.14
HDAC6-222ENST00000478095 DHFRP00374 187 aa7.92□□□□□ -1.14
HDAC6-222ENST00000478095 TRBV12-3P01733 135 aa7.92□□□□□ -1.14
HDAC6-222ENST00000478095 IGHV3-23P01764 117 aa7.92□□□□□ -1.14
HDAC6-222ENST00000478095 ANXA3P12429 323 aa7.92□□□□□ -1.14
HDAC6-222ENST00000478095 ATP5G2Q06055 141 aa7.92□□□□□ -1.14
HDAC6-222ENST00000478095 PPP1R1AQ13522 171 aa7.92□□□□□ -1.14
HDAC6-222ENST00000478095 C15orf32Q32M92 178 aa7.92□□□□□ -1.14
HDAC6-222ENST00000478095 Q6ZRM9 215 aa7.92□□□□□ -1.14
HDAC6-222ENST00000478095 LINC00299Q6ZSB3 139 aa7.92□□□□□ -1.14
HDAC6-222ENST00000478095 FAM223AQ8IWN6 122 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms