RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 GATBO75879 557 aaKnown RBP2.94□□□□□ -1.94
VPS50-214ENST00000477935 TRBV12-3P01733 135 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 CLUP10909 449 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 PSKH1P11801 424 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 ZNF44P15621 663 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 KDELR2P33947 212 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 IFNGR2P38484 337 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 GLP1RP43220 463 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 YAP1P46937 504 aaKnown RBP2.94□□□□□ -1.94
VPS50-214ENST00000477935 RBP2P50120 134 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 EXOSC2Q13868 293 aaKnown RBP2.94□□□□□ -1.94
VPS50-214ENST00000477935 LTC4SQ16873 150 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 TMEM41BQ5BJD5 291 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 LAMTOR1Q6IAA8 161 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 RPL13AP3Q6NVV1 102 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 ZNF767PQ75MW2 155 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 FUNDC1Q8IVP5 155 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 Q8NAQ8 132 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 OR5T1Q8NG75 326 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 OR6K6Q8NGW6 343 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 FANK1Q8TC84 345 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 OR51E1Q8TCB6 317 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 GHSRQ92847 366 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 BORCS8Q96FH0 119 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 TPD52L3Q96J77 140 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 CGREF1Q99674 301 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 NMNAT2Q9BZQ4 307 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 Q9H3A6 140 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 RBFOX1Q9NWB1 397 aaKnown RBP2.94□□□□□ -1.94
VPS50-214ENST00000477935 CCDC167Q9P0B6 97 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 GSTK1Q9Y2Q3 226 aa2.94□□□□□ -1.94
VPS50-214ENST00000477935 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.93□□□□□ -1.94
VPS50-214ENST00000477935 OR4C46A6NHA9 309 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 FAM223BA6NKX1 122 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 SDCBPO00560 298 aaPredicted RBP2.93□□□□□ -1.94
VPS50-214ENST00000477935 FCN1O00602 326 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 ORC5O43913 435 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 MRPS14O60783 128 aaKnown RBP2.93□□□□□ -1.94
VPS50-214ENST00000477935 ZNF254O75437 659 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 RBBP9O75884 186 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 GSTT2P0CG29 244 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 GSTT2BP0CG30 244 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 SPI1P17947 270 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 FUT3P21217 361 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 GZMMP51124 257 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 SLC18A1P54219 525 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 ATP1B3P54709 279 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 MTPNP58546 118 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 ATP5G2Q06055 141 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 ATXN7L3Q14CW9 347 aaPredicted RBP2.93□□□□□ -1.94
VPS50-214ENST00000477935 C12orf74Q32Q52 190 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 GLT8D1Q68CQ7 371 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 Q6ZSR3 168 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 ERI1Q8IV48 349 aaKnown RBP2.93□□□□□ -1.94
VPS50-214ENST00000477935 FAM223AQ8IWN6 122 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 IFT20Q8IY31 132 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 CCDC54Q8NEL0 328 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 OR6N2Q8NGY6 317 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 OTOSQ8NHW6 89 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 CD300LFQ8TDQ1 290 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 THEM6Q8WUY1 208 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 C10orf35Q96D05 121 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 TEAD3Q99594 435 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 FAM103A1Q9BTL3 118 aaKnown RBP2.93□□□□□ -1.94
VPS50-214ENST00000477935 MROQ9BYG7 248 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 FBXL15Q9H469 300 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 EHFQ9NZC4 300 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 MRPL27Q9P0M9 148 aaKnown RBP2.93□□□□□ -1.94
VPS50-214ENST00000477935 NUFIP1Q9UHK0 495 aaKnown RBP2.93□□□□□ -1.94
VPS50-214ENST00000477935 KIF25Q9UIL4 384 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 FAM32AQ9Y421 112 aaKnown RBP2.93□□□□□ -1.94
VPS50-214ENST00000477935 CDH10Q9Y6N8 788 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 V9GYQ6 96 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 V9GYS6 101 aa2.93□□□□□ -1.94
VPS50-214ENST00000477935 TMEM213A2RRL7 107 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 ZNF705EA8MWA4 302 aaPredicted RBP2.92□□□□□ -1.94
VPS50-214ENST00000477935 A8MWP6 167 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 H3BTX0 84 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 ANGPT2O15123 496 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 CA1P00915 261 aaPredicted RBP2.92□□□□□ -1.94
VPS50-214ENST00000477935 IFNGP01579 166 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 SHBGP04278 402 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 C8orf88P0DMB2 117 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 GALP22466 123 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 SSTR5P35346 364 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 SMIM11AP58511 58 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 ACTR3P61158 418 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 RPL32P62910 135 aaKnown RBP2.92□□□□□ -1.94
VPS50-214ENST00000477935 PDZK1IP1Q13113 114 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 MED21Q13503 144 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 FXYD3Q14802 87 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 ZNF829Q3KNS6 432 aaPredicted RBP2.92□□□□□ -1.94
VPS50-214ENST00000477935 LRRC23Q53EV4 343 aaPredicted RBP2.92□□□□□ -1.94
VPS50-214ENST00000477935 TTC32Q5I0X7 151 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 LINC01590Q5TEZ4 76 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 METTL21CQ5VZV1 264 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 Q6P435 159 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 MORN3Q6PF18 240 aaPredicted RBP2.92□□□□□ -1.94
VPS50-214ENST00000477935 OR5B3Q8NH48 314 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 OR1L1Q8NH94 360 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms