RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-215	ENST00000475319	C1QTNF5	Q9BXJ0	243 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	CLEC7A	Q9BXN2	247 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SH3BGRL3	Q9H299	93 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	PRORY	Q9H606	182 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	IDI2-AS1	Q9NZ38	188 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	GNG13	Q9P2W3	67 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	CES1P1	Q9UKY3	287 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TMED7	Q9Y3B3	224 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TRIP11	Q15643	1979 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	NYNRIN	Q9P2P1	1898 aa	Known RBP	4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ZNF236	Q9UL36	1845 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ZNF816-ZNF321P	A0A0X1KG74	233 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ZNF840P	A6NDX5	716 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ANGPTL7	O43827	346 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	KLF7	O75840	302 aa	Predicted RBP	4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SCT	P09683	121 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SP9	P0CG40	484 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	LINC00694	P0DN24	101 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	COX8A	P10176	69 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ACVRL1	P37023	503 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ASIP	P42127	132 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	HES1	Q14469	280 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TSPO2	Q5TGU0	170 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	FBXL22	Q6P050	247 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	FAM159A	Q6UWV7	190 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TBC1D26	Q86UD7	250 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ZFP62	Q8NB50	900 aa	Predicted RBP	4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	OR2A5	Q96R48	311 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	GNB1L	Q9BYB4	327 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	PLA2G12A	Q9BZM1	189 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	FAM234A	Q9H0X4	552 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	KCNK15	Q9H427	330 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319		Q9Y3F1	56 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ADAMTS20	P59510	1910 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ALPK3	Q96L96	1907 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	PLXNB2	O15031	1838 aa		4.94	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TRAV24	A0A0B4J272	114 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	LRRC3C	A6NJW4	275 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	PIN1P1	O15428	100 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TNFSF12	O43508	249 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SNCG	O76070	127 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SLC25A5	P05141	298 aa	Known RBP	4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	KLK1	P06870	262 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SMIM13	P0DJ93	91 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	FOLR3	P41439	243 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	HSPE1	P61604	102 aa	Known RBP	4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	CX3CL1	P78423	397 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	MRPS6	P82932	125 aa	Known RBP	4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	IHH	Q14623	411 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TEX36	Q5VZQ5	186 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	HIST2H2BC	Q6DN03	193 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	HIST2H2BD	Q6DRA6	164 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TMEM136	Q6ZRR5	245 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	FAM57B	Q71RH2	274 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ZNF550	Q7Z398	422 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	MORN4	Q8NDC4	146 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	OR4C13	Q8NGP0	309 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SLC37A2	Q8TED4	501 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	BAALC	Q8WXS3	180 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	C10orf35	Q96D05	121 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319		Q96MF0	132 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	FRG2B	Q96QU4	278 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	LINC01587	Q99440	93 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	C20orf78	Q9BR46	151 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TMEM70	Q9BUB7	260 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	NAA60	Q9H7X0	242 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319	PRND	Q9UKY0	176 aa		4.93	□□□□□ -1.62
ECHDC1-215	ENST00000475319		A0A1W2PPK0	400 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	FRG2C	A6NGY1	282 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	GGTLC3	B5MD39	225 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SMIM22	K7EJ46	135 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SLC17A2	O00624	439 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	IGHV3-7	P01780	117 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	FGF1	P05230	155 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	RBM11	P57052	281 aa	Known RBP	4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	RPS4X	P62701	263 aa	Known RBP	4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	RPS24	P62847	133 aa	Known RBP	4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	GNG5	P63218	68 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ETDB	Q3ZM63	59 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	PSMG4	Q5JS54	123 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SLC25A47	Q6Q0C1	308 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	PARM1	Q6UWI2	310 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	APRG1	Q8IVJ8	170 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ZNF695	Q8IW36	515 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	CLECL1	Q8IZS7	167 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ATOH7	Q8N100	152 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	FBXL14	Q8N1E6	418 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	KLHDC9	Q8NEP7	349 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	OR1L8	Q8NGR8	309 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	OR51H1	Q8NH63	302 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	LMX1A	Q8TE12	382 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	RASL10A	Q92737	203 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	PELI1	Q96FA3	418 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ABHD14B	Q96IU4	210 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SPATA33	Q96N06	139 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SFXN3	Q9BWM7	321 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	GNB4	Q9HAV0	340 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ZNF835	Q9Y2P0	537 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	LSM4	Q9Y4Z0	139 aa	Known RBP	4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms