RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 LHFPL5Q8TAF8 219 aa9.66□□□□□ -0.86
DDX56-209ENST00000473924 MYOZ3Q8TDC0 251 aa9.66□□□□□ -0.86
DDX56-209ENST00000473924 TMEM56Q96MV1 263 aa9.66□□□□□ -0.86
DDX56-209ENST00000473924 SRSF8Q9BRL6 282 aaKnown RBP9.66□□□□□ -0.86
DDX56-209ENST00000473924 PDCD10Q9BUL8 212 aa9.66□□□□□ -0.86
DDX56-209ENST00000473924 GNB4Q9HAV0 340 aa9.66□□□□□ -0.86
DDX56-209ENST00000473924 TMEM14BQ9NUH8 114 aa9.66□□□□□ -0.86
DDX56-209ENST00000473924 PRR13Q9NZ81 148 aa9.66□□□□□ -0.86
DDX56-209ENST00000473924 ZNF257Q9Y2Q1 563 aa9.66□□□□□ -0.86
DDX56-209ENST00000473924 TMEM56-RWDD3S4R434 201 aa9.66□□□□□ -0.86
DDX56-209ENST00000473924 PIGBOS1A0A0B4J2F0 54 aa9.65□□□□□ -0.86
DDX56-209ENST00000473924 CGB1A6NKQ9 187 aa9.65□□□□□ -0.86
DDX56-209ENST00000473924 NPIPB5A8MRT5 1133 aa9.65□□□□□ -0.86
DDX56-209ENST00000473924 UPK1BO75841 260 aa9.65□□□□□ -0.86
DDX56-209ENST00000473924 IGHV3-11P01762 117 aa9.65□□□□□ -0.86
DDX56-209ENST00000473924 PRH1P02810 166 aa9.65□□□□□ -0.86
DDX56-209ENST00000473924 PSMB6P28072 239 aa9.65□□□□□ -0.86
DDX56-209ENST00000473924 RAB25P57735 213 aa9.65□□□□□ -0.86
DDX56-209ENST00000473924 KIAA0141Q14154 515 aaPredicted RBP9.65□□□□□ -0.86
DDX56-209ENST00000473924 DEFB136Q30KP8 78 aa9.65□□□□□ -0.86
DDX56-209ENST00000473924 MZT2BQ6NZ67 158 aa9.65□□□□□ -0.86
DDX56-209ENST00000473924 HSD17B13Q7Z5P4 300 aaPredicted RBP9.65□□□□□ -0.86
DDX56-209ENST00000473924 MRPL41Q8IXM3 137 aaKnown RBP9.65□□□□□ -0.86
DDX56-209ENST00000473924 SLC35G3Q8N808 338 aa9.65□□□□□ -0.86
DDX56-209ENST00000473924 OR10W1Q8NGF6 305 aa9.65□□□□□ -0.86
DDX56-209ENST00000473924 IL22RA2Q969J5 263 aa9.65□□□□□ -0.86
DDX56-209ENST00000473924 LSM10Q969L4 123 aaKnown RBP9.65□□□□□ -0.86
DDX56-209ENST00000473924 NDUFA4L2Q9NRX3 87 aa9.65□□□□□ -0.86
DDX56-209ENST00000473924 FLVCR2Q9UPI3 526 aa9.65□□□□□ -0.86
DDX56-209ENST00000473924 A0A0G2JRQ6 117 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 IGLC7A0M8Q6 106 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 DBX1A6NMT0 343 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 CCL24O00175 119 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 BRI3O95415 125 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 SFT2D2O95562 160 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 IFNA17P01571 189 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 P0C879 139 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 OR13C7P0DN81 318 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 CTRB1P17538 263 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 CD33P20138 364 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 MYCNOSP40205 109 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 UBE2MP61081 183 aaKnown RBP9.64□□□□□ -0.87
DDX56-209ENST00000473924 HSPE1P61604 102 aaKnown RBP9.64□□□□□ -0.87
DDX56-209ENST00000473924 RHOGP84095 191 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 DEFA5Q01523 94 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 PPP1R1AQ13522 171 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 C4orf46Q504U0 113 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 CTRB2Q6GPI1 263 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 ZNF429Q86V71 674 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 OR11H1Q8NG94 326 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 RAX2Q96IS3 184 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 USMG5Q96IX5 58 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 DUX3Q96PT4 197 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 C20orf85Q9H1P6 137 aa9.64□□□□□ -0.87
DDX56-209ENST00000473924 A0A0B4J293 547 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 A0A0B4J2A0 478 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 FAM240BA0A1B0GVZ2 78 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 FAM223BA6NKX1 122 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 I3L521 148 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 CYB5BO43169 146 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 ST8SIA3O43173 380 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 OR2J3O76001 311 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 HLA-AP01891 365 aaKnown RBP9.63□□□□□ -0.87
DDX56-209ENST00000473924 TCRBP04435 133 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 CRYGCP07315 174 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 LGALS1P09382 135 aaKnown RBP9.63□□□□□ -0.87
DDX56-209ENST00000473924 HIST1H1BP16401 226 aaKnown RBP9.63□□□□□ -0.87
DDX56-209ENST00000473924 ANXA7P20073 488 aaKnown RBP9.63□□□□□ -0.87
DDX56-209ENST00000473924 PRCDQ00LT1 54 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 ATP5G2Q06055 141 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 ASAH1Q13510 395 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 C19orf35Q6ZS72 473 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 LYZL2Q7Z4W2 148 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 FAM223AQ8IWN6 122 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 NECAP1Q8NC96 275 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 OR1N2Q8NGR9 330 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 DPF1Q92782 380 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 GPR146Q96CH1 333 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 ALX4Q9H161 411 aaPredicted RBP9.63□□□□□ -0.87
DDX56-209ENST00000473924 PLEKHA3Q9HB20 300 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.63□□□□□ -0.87
DDX56-209ENST00000473924 CACNG5Q9UF02 275 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 SHPKQ9UHJ6 478 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 TBC1D24Q9ULP9 559 aa9.63□□□□□ -0.87
DDX56-209ENST00000473924 TRAV6A0A075B6T7 132 aa9.62□□□□□ -0.87
DDX56-209ENST00000473924 TRBV9A0A0B4J1U6 114 aa9.62□□□□□ -0.87
DDX56-209ENST00000473924 C9orf170A2RU37 121 aa9.62□□□□□ -0.87
DDX56-209ENST00000473924 OR4E1P0C645 316 aa9.62□□□□□ -0.87
DDX56-209ENST00000473924 SULT1A3P0DMM9 295 aa9.62□□□□□ -0.87
DDX56-209ENST00000473924 SULT1A4P0DMN0 295 aa9.62□□□□□ -0.87
DDX56-209ENST00000473924 ERHP84090 104 aaKnown RBP9.62□□□□□ -0.87
DDX56-209ENST00000473924 RUNX1Q01196 453 aa9.62□□□□□ -0.87
DDX56-209ENST00000473924 WT1-ASQ06250 92 aa9.62□□□□□ -0.87
DDX56-209ENST00000473924 ZNF616Q08AN1 781 aa9.62□□□□□ -0.87
DDX56-209ENST00000473924 ANKRD55Q3KP44 614 aa9.62□□□□□ -0.87
DDX56-209ENST00000473924 SPINK9Q5DT21 86 aa9.62□□□□□ -0.87
DDX56-209ENST00000473924 ETV3LQ6ZN32 361 aa9.62□□□□□ -0.87
DDX56-209ENST00000473924 ENKURQ8TC29 256 aa9.62□□□□□ -0.87
DDX56-209ENST00000473924 ENY2Q9NPA8 101 aa9.62□□□□□ -0.87
DDX56-209ENST00000473924 NUDT15Q9NV35 164 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms