RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 TNFRSF9Q07011 255 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 IDNKQ5T6J7 187 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 LAMTOR1Q6IAA8 161 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 UNQ9165/PRO28630Q6UXU0 137 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 ZNF818PQ6ZRF7 136 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 GVQW1Q8N7I0 195 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 OR1L8Q8NGR8 309 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 CACNG8Q8WXS5 425 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 TMEM190Q8WZ59 177 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 S100A16Q96FQ6 103 aaKnown RBP10.11□□□□□ -0.79
CHD3-209ENST00000473376 WFDC10AQ9H1F0 79 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 TMEM140Q9NV12 185 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 FKBP11Q9NYL4 201 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 ANAPC10Q9UM13 185 aa10.11□□□□□ -0.79
CHD3-209ENST00000473376 TNFSF12O43508 249 aa10.1□□□□□ -0.79
CHD3-209ENST00000473376 IGHV3-23P01764 117 aa10.1□□□□□ -0.79
CHD3-209ENST00000473376 NAT1P18440 290 aa10.1□□□□□ -0.79
CHD3-209ENST00000473376 EDN2P20800 178 aa10.1□□□□□ -0.79
CHD3-209ENST00000473376 CMC4P56277 68 aaPredicted RBP10.1□□□□□ -0.79
CHD3-209ENST00000473376 ERVK-16P61578 105 aa10.1□□□□□ -0.79
CHD3-209ENST00000473376 TM4SF20Q53R12 229 aa10.1□□□□□ -0.79
CHD3-209ENST00000473376 BTNL8Q6UX41 500 aa10.1□□□□□ -0.79
CHD3-209ENST00000473376 C19orf35Q6ZS72 473 aa10.1□□□□□ -0.79
CHD3-209ENST00000473376 CMTM1Q8IZ96 169 aa10.1□□□□□ -0.79
CHD3-209ENST00000473376 DMBX1Q8NFW5 382 aa10.1□□□□□ -0.79
CHD3-209ENST00000473376 OR5H6Q8NGV6 325 aa10.1□□□□□ -0.79
CHD3-209ENST00000473376 OR5B3Q8NH48 314 aa10.1□□□□□ -0.79
CHD3-209ENST00000473376 LSM10Q969L4 123 aaKnown RBP10.1□□□□□ -0.79
CHD3-209ENST00000473376 MOB3AQ96BX8 217 aa10.1□□□□□ -0.79
CHD3-209ENST00000473376 NDUFA4L2Q9NRX3 87 aa10.1□□□□□ -0.79
CHD3-209ENST00000473376 MARCH11A6NNE9 402 aa10.09□□□□□ -0.79
CHD3-209ENST00000473376 C15orf62A8K5M9 175 aa10.09□□□□□ -0.79
CHD3-209ENST00000473376 SCAF4O95104 1147 aaKnown RBP10.09□□□□□ -0.79
CHD3-209ENST00000473376 FCGR2BP31994 310 aaPredicted RBP10.09□□□□□ -0.79
CHD3-209ENST00000473376 GPR183P32249 361 aa10.09□□□□□ -0.79
CHD3-209ENST00000473376 TAS2R46P59540 309 aa10.09□□□□□ -0.79
CHD3-209ENST00000473376 HERV-K104P61576 105 aa10.09□□□□□ -0.79
CHD3-209ENST00000473376 ZNF585BQ52M93 769 aa10.09□□□□□ -0.79
CHD3-209ENST00000473376 AADACL3Q5VUY0 350 aa10.09□□□□□ -0.79
CHD3-209ENST00000473376 LPCAT3Q6P1A2 487 aa10.09□□□□□ -0.79
CHD3-209ENST00000473376 GPHA2Q96T91 129 aa10.09□□□□□ -0.79
CHD3-209ENST00000473376 TSC22D3Q99576 134 aa10.09□□□□□ -0.79
CHD3-209ENST00000473376 F11RQ9Y624 299 aaKnown RBP10.09□□□□□ -0.79
CHD3-209ENST00000473376 TEX50A0A1B0GTY4 177 aa10.08□□□□□ -0.8
CHD3-209ENST00000473376 NUPR2A6NF83 97 aa10.08□□□□□ -0.8
CHD3-209ENST00000473376 PGLYRP1O75594 196 aaPredicted RBP10.08□□□□□ -0.8
CHD3-209ENST00000473376 REG1AP05451 166 aa10.08□□□□□ -0.8
CHD3-209ENST00000473376 CD5P06127 495 aa10.08□□□□□ -0.8
CHD3-209ENST00000473376 OR13C7P0DN81 318 aa10.08□□□□□ -0.8
CHD3-209ENST00000473376 MXD1Q05195 221 aa10.08□□□□□ -0.8
CHD3-209ENST00000473376 WT1-ASQ06250 92 aa10.08□□□□□ -0.8
CHD3-209ENST00000473376 KCTD21Q4G0X4 260 aa10.08□□□□□ -0.8
CHD3-209ENST00000473376 TMEM217Q8N7C4 229 aa10.08□□□□□ -0.8
CHD3-209ENST00000473376 OR51H1Q8NH63 302 aa10.08□□□□□ -0.8
CHD3-209ENST00000473376 DGCR14Q96DF8 476 aaKnown RBP10.08□□□□□ -0.8
CHD3-209ENST00000473376 TMEM56Q96MV1 263 aa10.08□□□□□ -0.8
CHD3-209ENST00000473376 TXN2Q99757 166 aa10.08□□□□□ -0.8
CHD3-209ENST00000473376 IFT46Q9NQC8 304 aa10.08□□□□□ -0.8
CHD3-209ENST00000473376 C21orf62Q9NYP8 219 aa10.08□□□□□ -0.8
CHD3-209ENST00000473376 PRNDQ9UKY0 176 aa10.08□□□□□ -0.8
CHD3-209ENST00000473376 TRAV3A0A0B4J244 114 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 OR4C46A6NHA9 309 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 SPRY2O43597 315 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 SNAPC5O75971 98 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 S1PR2O95136 353 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 ATP6V1G2O95670 118 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 CLEC2LP0C7M8 214 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 PTHLHP12272 177 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 S100GP29377 79 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 FXYD4P59646 89 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 UBE2NLQ5JXB2 153 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 TMEM17Q86X19 198 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 OR10W1Q8NGF6 305 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 OR6F1Q8NGZ6 308 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 OR1P1Q8NH06 330 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 SCARB1Q8WTV0 552 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 CMTM3Q96MX0 182 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 TMEM14BQ9NUH8 114 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 EHFQ9NZC4 300 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 S4R3C0 116 aa10.07□□□□□ -0.8
CHD3-209ENST00000473376 LOC100506127A0A0U1RQW1 187 aa10.06□□□□□ -0.8
CHD3-209ENST00000473376 GPR31O00270 319 aa10.06□□□□□ -0.8
CHD3-209ENST00000473376 RELQ04864 619 aaPredicted RBP10.06□□□□□ -0.8
CHD3-209ENST00000473376 SLC25A24Q6NUK1 477 aa10.06□□□□□ -0.8
CHD3-209ENST00000473376 STPG3Q8N7X2 389 aa10.06□□□□□ -0.8
CHD3-209ENST00000473376 ZNF114Q8NC26 417 aa10.06□□□□□ -0.8
CHD3-209ENST00000473376 LINC00476Q8WZB0 136 aa10.06□□□□□ -0.8
CHD3-209ENST00000473376 RNF183Q96D59 192 aa10.06□□□□□ -0.8
CHD3-209ENST00000473376 GALNT14Q96FL9 552 aa10.06□□□□□ -0.8
CHD3-209ENST00000473376 OR10C1Q96KK4 312 aa10.06□□□□□ -0.8
CHD3-209ENST00000473376 ZNF2Q9BSG1 426 aaPredicted RBP10.06□□□□□ -0.8
CHD3-209ENST00000473376 OR2T8A6NH00 312 aa10.05□□□□□ -0.8
CHD3-209ENST00000473376 F8W735 103 aaPredicted RBP10.05□□□□□ -0.8
CHD3-209ENST00000473376 K7EIM0 57 aa10.05□□□□□ -0.8
CHD3-209ENST00000473376 TMEM69Q5SWH9 247 aa10.05□□□□□ -0.8
CHD3-209ENST00000473376 TSPAN14Q8NG11 270 aa10.05□□□□□ -0.8
CHD3-209ENST00000473376 OR5H2Q8NGV7 314 aa10.05□□□□□ -0.8
CHD3-209ENST00000473376 FCAMRQ8WWV6 532 aa10.05□□□□□ -0.8
CHD3-209ENST00000473376 C6orf62Q9GZU0 229 aaPredicted RBP10.05□□□□□ -0.8
CHD3-209ENST00000473376 RNF167Q9H6Y7 350 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms