RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 CASTOR1Q8WTX7 329 aa16.17■□□□□ 0.18
TOP3A-204ENST00000472959 NDUFA4L2Q9NRX3 87 aa16.17■□□□□ 0.18
TOP3A-204ENST00000472959 A0A0G2JLM5 398 aa16.16■□□□□ 0.18
TOP3A-204ENST00000472959 RBMXL2O75526 392 aaKnown RBP16.16■□□□□ 0.18
TOP3A-204ENST00000472959 DHFRP00374 187 aa16.16■□□□□ 0.18
TOP3A-204ENST00000472959 CRYGCP07315 174 aa16.16■□□□□ 0.18
TOP3A-204ENST00000472959 PSMB6P28072 239 aa16.16■□□□□ 0.18
TOP3A-204ENST00000472959 TMEM268Q5VZI3 342 aa16.16■□□□□ 0.18
TOP3A-204ENST00000472959 C8orf86Q6ZUL3 223 aa16.16■□□□□ 0.18
TOP3A-204ENST00000472959 ZNF429Q86V71 674 aa16.16■□□□□ 0.18
TOP3A-204ENST00000472959 LGI3Q8N145 548 aa16.16■□□□□ 0.18
TOP3A-204ENST00000472959 LSM10Q969L4 123 aaKnown RBP16.16■□□□□ 0.18
TOP3A-204ENST00000472959 A0A0B4J293 547 aa16.15■□□□□ 0.18
TOP3A-204ENST00000472959 IGLC7A0M8Q6 106 aa16.15■□□□□ 0.18
TOP3A-204ENST00000472959 AREGP15514 252 aa16.15■□□□□ 0.18
TOP3A-204ENST00000472959 VAMP1P23763 118 aa16.15■□□□□ 0.18
TOP3A-204ENST00000472959 RUNX1Q01196 453 aa16.15■□□□□ 0.18
TOP3A-204ENST00000472959 ASAH1Q13510 395 aa16.15■□□□□ 0.18
TOP3A-204ENST00000472959 MZT2BQ6NZ67 158 aa16.15■□□□□ 0.18
TOP3A-204ENST00000472959 USMG5Q96IX5 58 aa16.15■□□□□ 0.18
TOP3A-204ENST00000472959 GNB4Q9HAV0 340 aa16.15■□□□□ 0.18
TOP3A-204ENST00000472959 DBX1A6NMT0 343 aa16.14■□□□□ 0.17
TOP3A-204ENST00000472959 PF4P02776 101 aa16.14■□□□□ 0.17
TOP3A-204ENST00000472959 CTRB1P17538 263 aa16.14■□□□□ 0.17
TOP3A-204ENST00000472959 MYCNOSP40205 109 aa16.14■□□□□ 0.17
TOP3A-204ENST00000472959 HSPE1P61604 102 aaKnown RBP16.14■□□□□ 0.17
TOP3A-204ENST00000472959 PPP1R1AQ13522 171 aa16.14■□□□□ 0.17
TOP3A-204ENST00000472959 IZUMO4Q1ZYL8 232 aa16.14■□□□□ 0.17
TOP3A-204ENST00000472959 CTRB2Q6GPI1 263 aa16.14■□□□□ 0.17
TOP3A-204ENST00000472959 MRPL41Q8IXM3 137 aaKnown RBP16.14■□□□□ 0.17
TOP3A-204ENST00000472959 HINT2Q9BX68 163 aa16.14■□□□□ 0.17
TOP3A-204ENST00000472959 TBC1D24Q9ULP9 559 aa16.14■□□□□ 0.17
TOP3A-204ENST00000472959 WNK1Q9H4A3 2382 aa16.14■□□□□ 0.17
TOP3A-204ENST00000472959 TRBV9A0A0B4J1U6 114 aa16.13■□□□□ 0.17
TOP3A-204ENST00000472959 A0A0B4J2A0 478 aa16.13■□□□□ 0.17
TOP3A-204ENST00000472959 C13orf42A0A1B0GVH6 325 aa16.13■□□□□ 0.17
TOP3A-204ENST00000472959 FAM223BA6NKX1 122 aa16.13■□□□□ 0.17
TOP3A-204ENST00000472959 I3L521 148 aa16.13■□□□□ 0.17
TOP3A-204ENST00000472959 CCL24O00175 119 aa16.13■□□□□ 0.17
TOP3A-204ENST00000472959 SFT2D2O95562 160 aa16.13■□□□□ 0.17
TOP3A-204ENST00000472959 RAB25P57735 213 aa16.13■□□□□ 0.17
TOP3A-204ENST00000472959 FAM223AQ8IWN6 122 aa16.13■□□□□ 0.17
TOP3A-204ENST00000472959 SLC35G3Q8N808 338 aa16.13■□□□□ 0.17
TOP3A-204ENST00000472959 OR10W1Q8NGF6 305 aa16.13■□□□□ 0.17
TOP3A-204ENST00000472959 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.13■□□□□ 0.17
TOP3A-204ENST00000472959 SHPKQ9UHJ6 478 aa16.13■□□□□ 0.17
TOP3A-204ENST00000472959 FLVCR2Q9UPI3 526 aa16.13■□□□□ 0.17
TOP3A-204ENST00000472959 TRRAPQ9Y4A5 3859 aa16.13■□□□□ 0.17
TOP3A-204ENST00000472959 A0A0G2JRQ6 117 aa16.12■□□□□ 0.17
TOP3A-204ENST00000472959 DUXBA0A1W2PPF3 345 aa16.12■□□□□ 0.17
TOP3A-204ENST00000472959 TCRBP04435 133 aa16.12■□□□□ 0.17
TOP3A-204ENST00000472959 OR13C7P0DN81 318 aa16.12■□□□□ 0.17
TOP3A-204ENST00000472959 DEFA4P12838 97 aa16.12■□□□□ 0.17
TOP3A-204ENST00000472959 HIST1H1BP16401 226 aaKnown RBP16.12■□□□□ 0.17
TOP3A-204ENST00000472959 RHOGP84095 191 aa16.12■□□□□ 0.17
TOP3A-204ENST00000472959 KLK9Q2XQG4 91 aa16.12■□□□□ 0.17
TOP3A-204ENST00000472959 LRTM2Q8N967 370 aa16.12■□□□□ 0.17
TOP3A-204ENST00000472959 NECAP1Q8NC96 275 aa16.12■□□□□ 0.17
TOP3A-204ENST00000472959 RAX2Q96IS3 184 aa16.12■□□□□ 0.17
TOP3A-204ENST00000472959 PRR13Q9NZ81 148 aa16.12■□□□□ 0.17
TOP3A-204ENST00000472959 CACFD1Q9UGQ2 172 aa16.12■□□□□ 0.17
TOP3A-204ENST00000472959 KLK9Q9UKQ9 250 aa16.12■□□□□ 0.17
TOP3A-204ENST00000472959 FAM240BA0A1B0GVZ2 78 aa16.11■□□□□ 0.17
TOP3A-204ENST00000472959 CYB5BO43169 146 aa16.11■□□□□ 0.17
TOP3A-204ENST00000472959 PRH1P02810 166 aa16.11■□□□□ 0.17
TOP3A-204ENST00000472959 LGALS1P09382 135 aaKnown RBP16.11■□□□□ 0.17
TOP3A-204ENST00000472959 PRCDQ00LT1 54 aa16.11■□□□□ 0.17
TOP3A-204ENST00000472959 WT1-ASQ06250 92 aa16.11■□□□□ 0.17
TOP3A-204ENST00000472959 AARDQ4LEZ3 155 aa16.11■□□□□ 0.17
TOP3A-204ENST00000472959 ETV3LQ6ZN32 361 aa16.11■□□□□ 0.17
TOP3A-204ENST00000472959 Q6ZRM9 215 aa16.11■□□□□ 0.17
TOP3A-204ENST00000472959 GPR146Q96CH1 333 aa16.11■□□□□ 0.17
TOP3A-204ENST00000472959 OR5B12Q96R08 314 aa16.11■□□□□ 0.17
TOP3A-204ENST00000472959 P2RX4Q99571 388 aa16.11■□□□□ 0.17
TOP3A-204ENST00000472959 PDCD10Q9BUL8 212 aa16.11■□□□□ 0.17
TOP3A-204ENST00000472959 ALX4Q9H161 411 aaPredicted RBP16.11■□□□□ 0.17
TOP3A-204ENST00000472959 C20orf85Q9H1P6 137 aa16.11■□□□□ 0.17
TOP3A-204ENST00000472959 C9orf170A2RU37 121 aa16.1■□□□□ 0.17
TOP3A-204ENST00000472959 ST8SIA3O43173 380 aa16.1■□□□□ 0.17
TOP3A-204ENST00000472959 IFNA17P01571 189 aa16.1■□□□□ 0.17
TOP3A-204ENST00000472959 REG1AP05451 166 aa16.1■□□□□ 0.17
TOP3A-204ENST00000472959 OR4E1P0C645 316 aa16.1■□□□□ 0.17
TOP3A-204ENST00000472959 ANXA7P20073 488 aaKnown RBP16.1■□□□□ 0.17
TOP3A-204ENST00000472959 MECP2P51608 486 aaKnown RBP16.1■□□□□ 0.17
TOP3A-204ENST00000472959 IFITM3Q01628 133 aa16.1■□□□□ 0.17
TOP3A-204ENST00000472959 ATP5G2Q06055 141 aa16.1■□□□□ 0.17
TOP3A-204ENST00000472959 ANKRD55Q3KP44 614 aa16.1■□□□□ 0.17
TOP3A-204ENST00000472959 LYZL2Q7Z4W2 148 aa16.1■□□□□ 0.17
TOP3A-204ENST00000472959 WFDC9Q8NEX5 89 aa16.1■□□□□ 0.17
TOP3A-204ENST00000472959 OR1N2Q8NGR9 330 aa16.1■□□□□ 0.17
TOP3A-204ENST00000472959 PLEKHA3Q9HB20 300 aa16.1■□□□□ 0.17
TOP3A-204ENST00000472959 CACNG5Q9UF02 275 aa16.1■□□□□ 0.17
TOP3A-204ENST00000472959 IGHV3-11P01762 117 aa16.09■□□□□ 0.17
TOP3A-204ENST00000472959 HLA-AP01891 365 aaKnown RBP16.09■□□□□ 0.17
TOP3A-204ENST00000472959 SULT1A3P0DMM9 295 aa16.09■□□□□ 0.17
TOP3A-204ENST00000472959 SULT1A4P0DMN0 295 aa16.09■□□□□ 0.17
TOP3A-204ENST00000472959 DEFB136Q30KP8 78 aa16.09■□□□□ 0.17
TOP3A-204ENST00000472959 C4orf46Q504U0 113 aa16.09■□□□□ 0.17
TOP3A-204ENST00000472959 NMSQ5H8A3 153 aa16.09■□□□□ 0.17
TOP3A-204ENST00000472959 LYG2Q86SG7 212 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms