RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 HIST1H1AQ02539 215 aaPredicted RBP13.94□□□□□ -0.18
HOXB3-205ENST00000470495 TMEM42Q69YG0 159 aa13.94□□□□□ -0.18
HOXB3-205ENST00000470495 LIN7CQ9NUP9 197 aaKnown RBP13.94□□□□□ -0.18
HOXB3-205ENST00000470495 CYSLTR1Q9Y271 337 aa13.94□□□□□ -0.18
HOXB3-205ENST00000470495 DEDDO75618 318 aa13.94□□□□□ -0.18
HOXB3-205ENST00000470495 PSG2P11465 335 aa13.94□□□□□ -0.18
HOXB3-205ENST00000470495 CCDC144NLQ6NUI1 221 aa13.94□□□□□ -0.18
HOXB3-205ENST00000470495 CISD2Q8N5K1 135 aaKnown RBP13.94□□□□□ -0.18
HOXB3-205ENST00000470495 IL36GQ9NZH8 169 aa13.94□□□□□ -0.18
HOXB3-205ENST00000470495 CRIM1Q9NZV1 1036 aa13.94□□□□□ -0.18
HOXB3-205ENST00000470495 SHANK1Q9Y566 2161 aa13.93□□□□□ -0.18
HOXB3-205ENST00000470495 HKR1P10072 659 aa13.93□□□□□ -0.18
HOXB3-205ENST00000470495 ZNF331Q9NQX6 463 aaPredicted RBP13.93□□□□□ -0.18
HOXB3-205ENST00000470495 ESPL1Q14674 2120 aa13.93□□□□□ -0.18
HOXB3-205ENST00000470495 CHST1O43916 411 aa13.93□□□□□ -0.18
HOXB3-205ENST00000470495 PSG9Q00887 426 aa13.93□□□□□ -0.18
HOXB3-205ENST00000470495 CXorf66Q5JRM2 361 aaPredicted RBP13.93□□□□□ -0.18
HOXB3-205ENST00000470495 TMEM256Q8N2U0 113 aa13.93□□□□□ -0.18
HOXB3-205ENST00000470495 INSIG2Q9Y5U4 225 aa13.93□□□□□ -0.18
HOXB3-205ENST00000470495 VDAC1P21796 283 aa13.93□□□□□ -0.18
HOXB3-205ENST00000470495 ERVK-16P61578 105 aa13.93□□□□□ -0.18
HOXB3-205ENST00000470495 FOXF2Q12947 444 aa13.93□□□□□ -0.18
HOXB3-205ENST00000470495 PSG7Q13046 419 aa13.93□□□□□ -0.18
HOXB3-205ENST00000470495 GFRALQ6UXV0 394 aa13.93□□□□□ -0.18
HOXB3-205ENST00000470495 EGLN1Q9GZT9 426 aa13.93□□□□□ -0.18
HOXB3-205ENST00000470495 PKDREJQ9NTG1 2253 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 IGLV3-1P01715 115 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 MPV17P39210 176 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 IL13RA2Q14627 380 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 SAXO1Q8IYX7 474 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 PSG11Q9UQ72 335 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 KBTBD11-OT1A0A1B0GTJ5 212 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 FGF16O43320 207 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 ACSF3Q4G176 576 aaPredicted RBP13.92□□□□□ -0.18
HOXB3-205ENST00000470495 IGHV3OR15-7A0A075B7D8 119 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 FAM90A10PA6NDY2 464 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 FAM90A18PA6NE21 464 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 FAM90A16PA6NEW6 464 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 FAM90A20PA6NIJ5 464 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 FAM90A8PA6NJQ4 464 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 FAM90A7PA6NKC0 464 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 FAM90A22PA8MWA6 464 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 FAM90A12PA8MX19 464 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 FAM90A5PA8MXJ8 464 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 FAM90A23PA8MXZ1 464 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 FAM90A15PP0C7V4 464 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 FAM90A13PP0C7W8 464 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 FAM90A14PP0C7W9 464 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 FAM90A24PP0C7X0 464 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 WDR82Q6UXN9 313 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 SPRY4Q9C004 299 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 TMEM222Q9H0R3 208 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 DYNLRB1Q9NP97 96 aa13.92□□□□□ -0.18
HOXB3-205ENST00000470495 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.92□□□□□ -0.18
HOXB3-205ENST00000470495 TFF1P04155 84 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 TDRG1Q3Y452 100 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 ZFAND6Q6FIF0 208 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 PNKDQ8N490 385 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 SPSB4Q96A44 273 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 SGK494Q96LW2 274 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 PSENENQ9NZ42 101 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 IFNL4K9M1U5 179 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 LRRC75BQ2VPJ9 315 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 H2BFWTQ7Z2G1 175 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 OR13C6PQ8NH95 151 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 AQP10Q96PS8 301 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 PRR14LQ5THK1 2151 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 GPR12P47775 334 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 C20orf144Q9BQM9 153 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 MUC6Q6W4X9 2439 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 SNCGO76070 127 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 CECR9P0C854 216 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 TSPOP30536 169 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 HBG1P69891 147 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 HBG2P69892 147 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 PMCHL1Q16048 86 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 KIAA1644Q3SXP7 199 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 SPINK9Q5DT21 86 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 MOGAT3Q86VF5 341 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 TMEM191AQ9H0A3 160 aa13.91□□□□□ -0.18
HOXB3-205ENST00000470495 IGKV1D-13A0A0B4J2D9 117 aa13.9□□□□□ -0.18
HOXB3-205ENST00000470495 SNURFLB1AK76 121 aa13.9□□□□□ -0.18
HOXB3-205ENST00000470495 IGKV1-13P0DP09 117 aa13.9□□□□□ -0.18
HOXB3-205ENST00000470495 EWSR1Q01844 656 aaKnown RBP eCLIP13.9□□□□□ -0.18
HOXB3-205ENST00000470495 TM4SF20Q53R12 229 aa13.9□□□□□ -0.18
HOXB3-205ENST00000470495 ZBTB34Q8NCN2 500 aa13.9□□□□□ -0.18
HOXB3-205ENST00000470495 ZC2HC1AQ96GY0 325 aa13.9□□□□□ -0.18
HOXB3-205ENST00000470495 MRPL16Q9NX20 251 aaKnown RBP13.9□□□□□ -0.18
HOXB3-205ENST00000470495 H1FOOQ8IZA3 346 aaPredicted RBP13.9□□□□□ -0.18
HOXB3-205ENST00000470495 TMEM189A5PLL7 270 aa13.9□□□□□ -0.18
HOXB3-205ENST00000470495 NPIPB5A8MRT5 1133 aa13.9□□□□□ -0.18
HOXB3-205ENST00000470495 MUC21A0A0G2JKD1 596 aa13.89□□□□□ -0.19
HOXB3-205ENST00000470495 IGHV1-69-2A0A0G2JMI3 117 aa13.89□□□□□ -0.19
HOXB3-205ENST00000470495 MUC21A0A140T8X8 626 aa13.89□□□□□ -0.19
HOXB3-205ENST00000470495 G6PCP35575 357 aa13.89□□□□□ -0.19
HOXB3-205ENST00000470495 MRPL23Q16540 153 aaKnown RBP13.89□□□□□ -0.19
HOXB3-205ENST00000470495 MUC21Q5SSG8 566 aa13.89□□□□□ -0.19
HOXB3-205ENST00000470495 OR8G5Q8NG78 346 aa13.89□□□□□ -0.19
HOXB3-205ENST00000470495 OR1L1Q8NH94 360 aa13.89□□□□□ -0.19
HOXB3-205ENST00000470495 SGMS2Q8NHU3 365 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms