RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 VN1R17PQ8TDU5 208 aa13.09□□□□□ -0.31
COL7A1-208ENST00000470076 S100A16Q96FQ6 103 aaKnown RBP13.09□□□□□ -0.31
COL7A1-208ENST00000470076 GGTLC1Q9BX51 225 aa13.09□□□□□ -0.31
COL7A1-208ENST00000470076 IFT46Q9NQC8 304 aa13.09□□□□□ -0.31
COL7A1-208ENST00000470076 PLECQ15149 4684 aaKnown RBP13.08□□□□□ -0.32
COL7A1-208ENST00000470076 LOC102724200A0A096LPH7 203 aaPredicted RBP13.08□□□□□ -0.32
COL7A1-208ENST00000470076 TRAPPC2P0DI81 140 aa13.08□□□□□ -0.32
COL7A1-208ENST00000470076 TRAPPC2BP0DI82 140 aa13.08□□□□□ -0.32
COL7A1-208ENST00000470076 GNRHRP30968 328 aa13.08□□□□□ -0.32
COL7A1-208ENST00000470076 ERVK-16P61578 105 aa13.08□□□□□ -0.32
COL7A1-208ENST00000470076 ZNF585BQ52M93 769 aa13.08□□□□□ -0.32
COL7A1-208ENST00000470076 DHRS11Q6UWP2 260 aa13.08□□□□□ -0.32
COL7A1-208ENST00000470076 OR10W1Q8NGF6 305 aa13.08□□□□□ -0.32
COL7A1-208ENST00000470076 EHFQ9NZC4 300 aa13.08□□□□□ -0.32
COL7A1-208ENST00000470076 MEIS3P1A6NDR6 274 aa13.07□□□□□ -0.32
COL7A1-208ENST00000470076 MARCH11A6NNE9 402 aa13.07□□□□□ -0.32
COL7A1-208ENST00000470076 TGOLN2O43493 480 aa13.07□□□□□ -0.32
COL7A1-208ENST00000470076 SERPINE2P07093 398 aa13.07□□□□□ -0.32
COL7A1-208ENST00000470076 OR13C7P0DN81 318 aa13.07□□□□□ -0.32
COL7A1-208ENST00000470076 F2RP25116 425 aa13.07□□□□□ -0.32
COL7A1-208ENST00000470076 OR1L6Q8NGR2 347 aa13.07□□□□□ -0.32
COL7A1-208ENST00000470076 OR1L8Q8NGR8 309 aa13.07□□□□□ -0.32
COL7A1-208ENST00000470076 ZNF436Q9C0F3 470 aaPredicted RBP13.07□□□□□ -0.32
COL7A1-208ENST00000470076 IGHV3-35A0A0C4DH35 117 aa13.06□□□□□ -0.32
COL7A1-208ENST00000470076 TEX50A0A1B0GTY4 177 aa13.06□□□□□ -0.32
COL7A1-208ENST00000470076 RLN1P04808 185 aa13.06□□□□□ -0.32
COL7A1-208ENST00000470076 RPA2P15927 270 aa13.06□□□□□ -0.32
COL7A1-208ENST00000470076 WT1-ASQ06250 92 aa13.06□□□□□ -0.32
COL7A1-208ENST00000470076 KCTD21Q4G0X4 260 aa13.06□□□□□ -0.32
COL7A1-208ENST00000470076 UBE2NLQ5JXB2 153 aa13.06□□□□□ -0.32
COL7A1-208ENST00000470076 CADM3Q8N126 398 aa13.06□□□□□ -0.32
COL7A1-208ENST00000470076 TMEM190Q8WZ59 177 aa13.06□□□□□ -0.32
COL7A1-208ENST00000470076 MOB3AQ96BX8 217 aa13.06□□□□□ -0.32
COL7A1-208ENST00000470076 ATP6V0BQ99437 205 aa13.06□□□□□ -0.32
COL7A1-208ENST00000470076 C5orf66Q9H5L9 145 aa13.06□□□□□ -0.32
COL7A1-208ENST00000470076 ANAPC10Q9UM13 185 aa13.06□□□□□ -0.32
COL7A1-208ENST00000470076 HYDINQ4G0P3 5121 aa13.06□□□□□ -0.32
COL7A1-208ENST00000470076 BIRC6Q9NR09 4857 aa13.06□□□□□ -0.32
COL7A1-208ENST00000470076 PGLYRP1O75594 196 aaPredicted RBP13.05□□□□□ -0.32
COL7A1-208ENST00000470076 RFX2P48378 723 aa13.05□□□□□ -0.32
COL7A1-208ENST00000470076 TAS2R46P59540 309 aa13.05□□□□□ -0.32
COL7A1-208ENST00000470076 SLC25A24Q6NUK1 477 aa13.05□□□□□ -0.32
COL7A1-208ENST00000470076 SPSB3Q6PJ21 355 aa13.05□□□□□ -0.32
COL7A1-208ENST00000470076 CMTM1Q8IZ96 169 aa13.05□□□□□ -0.32
COL7A1-208ENST00000470076 SLC38A6Q8IZM9 456 aa13.05□□□□□ -0.32
COL7A1-208ENST00000470076 OR2C3Q8N628 320 aa13.05□□□□□ -0.32
COL7A1-208ENST00000470076 LSM10Q969L4 123 aaKnown RBP13.05□□□□□ -0.32
COL7A1-208ENST00000470076 BSCL2Q96G97 398 aaPredicted RBP13.05□□□□□ -0.32
COL7A1-208ENST00000470076 SPAG8Q99932 426 aaPredicted RBP13.05□□□□□ -0.32
COL7A1-208ENST00000470076 OVOL2Q9BRP0 275 aa13.05□□□□□ -0.32
COL7A1-208ENST00000470076 ZNF2Q9BSG1 426 aaPredicted RBP13.05□□□□□ -0.32
COL7A1-208ENST00000470076 DAZ1Q9NQZ3 744 aaKnown RBP13.05□□□□□ -0.32
COL7A1-208ENST00000470076 NDUFA4L2Q9NRX3 87 aa13.05□□□□□ -0.32
COL7A1-208ENST00000470076 NAT1P18440 290 aa13.04□□□□□ -0.32
COL7A1-208ENST00000470076 LPAR6P43657 344 aa13.04□□□□□ -0.32
COL7A1-208ENST00000470076 TMEM69Q5SWH9 247 aa13.04□□□□□ -0.32
COL7A1-208ENST00000470076 OR5H2Q8NGV7 314 aa13.04□□□□□ -0.32
COL7A1-208ENST00000470076 DGCR14Q96DF8 476 aaKnown RBP13.04□□□□□ -0.32
COL7A1-208ENST00000470076 F11RQ9Y624 299 aaKnown RBP13.04□□□□□ -0.32
COL7A1-208ENST00000470076 ALMS1Q8TCU4 4167 aa13.03□□□□□ -0.32
COL7A1-208ENST00000470076 OR2T8A6NH00 312 aa13.03□□□□□ -0.32
COL7A1-208ENST00000470076 NDUFA4O00483 81 aa13.03□□□□□ -0.32
COL7A1-208ENST00000470076 TSPAN4O14817 238 aa13.03□□□□□ -0.32
COL7A1-208ENST00000470076 SNAPC5O75971 98 aa13.03□□□□□ -0.32
COL7A1-208ENST00000470076 KRASP01116 189 aa13.03□□□□□ -0.32
COL7A1-208ENST00000470076 PMP2P02689 132 aa13.03□□□□□ -0.32
COL7A1-208ENST00000470076 TAS2R20P59543 309 aa13.03□□□□□ -0.32
COL7A1-208ENST00000470076 LAMTOR1Q6IAA8 161 aa13.03□□□□□ -0.32
COL7A1-208ENST00000470076 SAMD12Q8N8I0 201 aa13.03□□□□□ -0.32
COL7A1-208ENST00000470076 TSPAN14Q8NG11 270 aa13.03□□□□□ -0.32
COL7A1-208ENST00000470076 OR6F1Q8NGZ6 308 aa13.03□□□□□ -0.32
COL7A1-208ENST00000470076 FCAMRQ8WWV6 532 aa13.03□□□□□ -0.32
COL7A1-208ENST00000470076 HINT2Q9BX68 163 aa13.03□□□□□ -0.32
COL7A1-208ENST00000470076 FKBP11Q9NYL4 201 aa13.03□□□□□ -0.32
COL7A1-208ENST00000470076 C21orf62Q9NYP8 219 aa13.03□□□□□ -0.32
COL7A1-208ENST00000470076 OR51B2Q9Y5P1 312 aa13.03□□□□□ -0.32
COL7A1-208ENST00000470076 GPR31O00270 319 aa13.02□□□□□ -0.33
COL7A1-208ENST00000470076 PRSS3P35030 304 aa13.02□□□□□ -0.33
COL7A1-208ENST00000470076 RPS19P39019 145 aaKnown RBP13.02□□□□□ -0.33
COL7A1-208ENST00000470076 MFAP2P55001 183 aa13.02□□□□□ -0.33
COL7A1-208ENST00000470076 APOC4P55056 127 aa13.02□□□□□ -0.33
COL7A1-208ENST00000470076 OR5B3Q8NH48 314 aa13.02□□□□□ -0.33
COL7A1-208ENST00000470076 SCARB1Q8WTV0 552 aa13.02□□□□□ -0.33
COL7A1-208ENST00000470076 TMEM56Q96MV1 263 aa13.02□□□□□ -0.33
COL7A1-208ENST00000470076 PRNDQ9UKY0 176 aa13.02□□□□□ -0.33
COL7A1-208ENST00000470076 TP53TG1Q9Y2A0 90 aa13.02□□□□□ -0.33
COL7A1-208ENST00000470076 K7EMT4 169 aa13.01□□□□□ -0.33
COL7A1-208ENST00000470076 G6PCP35575 357 aa13.01□□□□□ -0.33
COL7A1-208ENST00000470076 TGFBR1P36897 503 aa13.01□□□□□ -0.33
COL7A1-208ENST00000470076 Q6ZWC4 215 aa13.01□□□□□ -0.33
COL7A1-208ENST00000470076 WFDC3Q8IUB2 231 aa13.01□□□□□ -0.33
COL7A1-208ENST00000470076 TSC22D3Q99576 134 aa13.01□□□□□ -0.33
COL7A1-208ENST00000470076 CHRDL1Q9BU40 450 aa13.01□□□□□ -0.33
COL7A1-208ENST00000470076 FXYD6Q9H0Q3 95 aa13.01□□□□□ -0.33
COL7A1-208ENST00000470076 NSG2Q9Y328 171 aa13.01□□□□□ -0.33
COL7A1-208ENST00000470076 K7EIM0 57 aa13□□□□□ -0.33
COL7A1-208ENST00000470076 UBE2CO00762 179 aa13□□□□□ -0.33
COL7A1-208ENST00000470076 S100GP29377 79 aa13□□□□□ -0.33
COL7A1-208ENST00000470076 C20orf24Q9BUV8 137 aa13□□□□□ -0.33
COL7A1-208ENST00000470076 FAM212BQ9NTI7 297 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms