RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 C1QL4Q86Z23 238 aa11.44□□□□□ -0.58
TMEM39A-205ENST00000468676 OR4A16Q8NH70 328 aa11.44□□□□□ -0.58
TMEM39A-205ENST00000468676 C5orf66Q9H5L9 145 aa11.44□□□□□ -0.58
TMEM39A-205ENST00000468676 RANGRFQ9HD47 186 aaPredicted RBP11.44□□□□□ -0.58
TMEM39A-205ENST00000468676 TMEM14BQ9NUH8 114 aa11.44□□□□□ -0.58
TMEM39A-205ENST00000468676 ZMAT5Q9UDW3 170 aaKnown RBP11.44□□□□□ -0.58
TMEM39A-205ENST00000468676 KLK9Q9UKQ9 250 aa11.44□□□□□ -0.58
TMEM39A-205ENST00000468676 KCNIP3Q9Y2W7 256 aa11.44□□□□□ -0.58
TMEM39A-205ENST00000468676 OR51B2Q9Y5P1 312 aa11.44□□□□□ -0.58
TMEM39A-205ENST00000468676 CRYM-AS1A6NIL9 109 aa11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 CGB1A6NKQ9 187 aa11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 C15orf61A6NNL5 157 aa11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 DEFA4P12838 97 aa11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 AREGP15514 252 aa11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 CTRB1P17538 263 aa11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 ZP3P21754 424 aa11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 ATP5G2Q06055 141 aa11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 TRIQKQ629K1 86 aa11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 ZNF57Q68EA5 555 aaPredicted RBP11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 CTRB2Q6GPI1 263 aa11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 ZNF343Q6P1L6 599 aa11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 LINC00299Q6ZSB3 139 aa11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 SGPP2Q8IWX5 399 aa11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 TMEM56Q96MV1 263 aa11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 SLC25A21Q9BQT8 299 aaPredicted RBP11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 TMEM222Q9H0R3 208 aa11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 ALX4Q9H161 411 aaPredicted RBP11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 NAA60Q9H7X0 242 aa11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 AKIP1Q9NQ31 210 aa11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 NDUFA4L2Q9NRX3 87 aa11.43□□□□□ -0.58
TMEM39A-205ENST00000468676 IGLC7A0M8Q6 106 aa11.42□□□□□ -0.58
TMEM39A-205ENST00000468676 A6NHS1 94 aa11.42□□□□□ -0.58
TMEM39A-205ENST00000468676 CDS2O95674 445 aa11.42□□□□□ -0.58
TMEM39A-205ENST00000468676 MYOD1P15172 320 aa11.42□□□□□ -0.58
TMEM39A-205ENST00000468676 AKR1C2P52895 323 aa11.42□□□□□ -0.58
TMEM39A-205ENST00000468676 SP6Q3SY56 376 aa11.42□□□□□ -0.58
TMEM39A-205ENST00000468676 REC114Q7Z4M0 266 aa11.42□□□□□ -0.58
TMEM39A-205ENST00000468676 LSM10Q969L4 123 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-205ENST00000468676 RRNAD1Q96FB5 475 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-205ENST00000468676 PEF1Q9UBV8 284 aaKnown RBP11.42□□□□□ -0.58
TMEM39A-205ENST00000468676 NSG2Q9Y328 171 aa11.42□□□□□ -0.58
TMEM39A-205ENST00000468676 IGHV4OR15-8A0A075B7B6 117 aa11.41□□□□□ -0.58
TMEM39A-205ENST00000468676 A0A087WW49 117 aa11.41□□□□□ -0.58
TMEM39A-205ENST00000468676 PIGBOS1A0A0B4J2F0 54 aa11.41□□□□□ -0.58
TMEM39A-205ENST00000468676 NAP1L6A6NFF2 107 aa11.41□□□□□ -0.58
TMEM39A-205ENST00000468676 OVOL1O14753 267 aa11.41□□□□□ -0.58
TMEM39A-205ENST00000468676 WIPF1O43516 503 aa11.41□□□□□ -0.58
TMEM39A-205ENST00000468676 RBMXL2O75526 392 aaKnown RBP11.41□□□□□ -0.58
TMEM39A-205ENST00000468676 PRH1P02810 166 aa11.41□□□□□ -0.58
TMEM39A-205ENST00000468676 OR5AC1P0C628 307 aa11.41□□□□□ -0.58
TMEM39A-205ENST00000468676 C15orf32Q32M92 178 aa11.41□□□□□ -0.58
TMEM39A-205ENST00000468676 C9orf66Q5T8R8 295 aa11.41□□□□□ -0.58
TMEM39A-205ENST00000468676 FAM219AQ8IW50 185 aa11.41□□□□□ -0.58
TMEM39A-205ENST00000468676 GLYATL2Q8WU03 294 aa11.41□□□□□ -0.58
TMEM39A-205ENST00000468676 GALNT14Q96FL9 552 aa11.41□□□□□ -0.58
TMEM39A-205ENST00000468676 HINT2Q9BX68 163 aa11.41□□□□□ -0.58
TMEM39A-205ENST00000468676 BATF3Q9NR55 127 aa11.41□□□□□ -0.58
TMEM39A-205ENST00000468676 THYN1Q9P016 225 aa11.41□□□□□ -0.58
TMEM39A-205ENST00000468676 FBXL7Q9UJT9 491 aa11.41□□□□□ -0.58
TMEM39A-205ENST00000468676 ANKRD34BA5PLL1 514 aa11.4□□□□□ -0.58
TMEM39A-205ENST00000468676 SEC14L6B5MCN3 397 aa11.4□□□□□ -0.58
TMEM39A-205ENST00000468676 OR2J3O76001 311 aa11.4□□□□□ -0.58
TMEM39A-205ENST00000468676 IGKV1-5P01602 117 aa11.4□□□□□ -0.58
TMEM39A-205ENST00000468676 REG1AP05451 166 aa11.4□□□□□ -0.58
TMEM39A-205ENST00000468676 P0C879 139 aa11.4□□□□□ -0.58
TMEM39A-205ENST00000468676 OR13C7P0DN81 318 aa11.4□□□□□ -0.58
TMEM39A-205ENST00000468676 INSL3P51460 131 aa11.4□□□□□ -0.58
TMEM39A-205ENST00000468676 HSPE1P61604 102 aaKnown RBP11.4□□□□□ -0.58
TMEM39A-205ENST00000468676 EXOSC2Q13868 293 aaKnown RBP11.4□□□□□ -0.58
TMEM39A-205ENST00000468676 ZNF429Q86V71 674 aa11.4□□□□□ -0.58
TMEM39A-205ENST00000468676 OR10W1Q8NGF6 305 aa11.4□□□□□ -0.58
TMEM39A-205ENST00000468676 OR1L6Q8NGR2 347 aa11.4□□□□□ -0.58
TMEM39A-205ENST00000468676 RNASE11Q8TAA1 199 aaKnown RBP11.4□□□□□ -0.58
TMEM39A-205ENST00000468676 DCUN1D4Q92564 292 aa11.4□□□□□ -0.58
TMEM39A-205ENST00000468676 RBPMSQ93062 196 aaKnown RBP11.4□□□□□ -0.58
TMEM39A-205ENST00000468676 FANCD2OSQ96PS1 177 aa11.4□□□□□ -0.58
TMEM39A-205ENST00000468676 IGLV11-55A0A075B6I3 123 aa11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 CENPXA8MT69 81 aa11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 ANXA3P12429 323 aa11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 AKR1C4P17516 323 aa11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 HOXD3P31249 432 aaPredicted RBP11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 MECP2P51608 486 aaKnown RBP11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 SLURP1P55000 103 aa11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 SRPXP78539 464 aa11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 PRCDQ00LT1 54 aa11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 WT1-ASQ06250 92 aa11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 EGFEM1PQ0D2K5 195 aa11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 BAK1Q16611 211 aa11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 TATDN3Q17R31 274 aa11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 DLX4Q92988 240 aaPredicted RBP11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 IL22RA2Q969J5 263 aa11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 CXorf58Q96LI9 332 aa11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 C7orf50Q9BRJ6 194 aaKnown RBP11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 CACFD1Q9UGQ2 172 aa11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 TMEM56-RWDD3S4R434 201 aa11.39□□□□□ -0.59
TMEM39A-205ENST00000468676 TRBV7-1A0A0A6YYK4 115 aa11.38□□□□□ -0.59
TMEM39A-205ENST00000468676 DBX1A6NMT0 343 aa11.38□□□□□ -0.59
TMEM39A-205ENST00000468676 DEFA5Q01523 94 aa11.38□□□□□ -0.59
TMEM39A-205ENST00000468676 RBMS2Q15434 407 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms