RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 KISS1Q15726 138 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 PABPC1L2AQ5JQF8 200 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 AADACL3Q5VUY0 350 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 BPIFA4PQ86YQ2 179 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 OR8B12Q8NGG6 310 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 TMEM147Q9BVK8 224 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 DCSTAMPQ9H295 470 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 VCX3BQ9H321 246 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 FBXL12Q9NXK8 326 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 FLT4P35916 1363 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 CCDC144AA2RUR9 1427 aa1.8□□□□□ -2.12
VPS13A-209ENST00000467124 TRAV7A0A075B6U4 112 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 TRAV26-2A0A0B4J265 109 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 A0A1B0GW54 56 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 TRAPPC2LH3BP13 241 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 H7C2G1 150 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 OVOL1O14753 267 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 FADS1O60427 444 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 PRM2P04554 102 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 HSD11B1P28845 292 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 ALDH3A1P30838 453 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 CCL7P80098 99 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 RELAQ04206 551 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 SPA17Q15506 151 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 C9orf64Q5T6V5 341 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 KTN1-AS1Q86SY8 53 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 OR6V1Q8N148 313 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 PHOSPHO2Q8TCD6 241 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 SIGMAR1Q99720 223 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 PRTFDC1Q9NRG1 225 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 UQCC1Q9NVA1 299 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 PRO2289Q9P1D8 64 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 HECW1Q76N89 1606 aa1.79□□□□□ -2.12
VPS13A-209ENST00000467124 NYNRINQ9P2P1 1898 aaKnown RBP1.79□□□□□ -2.12
VPS13A-209ENST00000467124 ADAMTS7Q9UKP4 1686 aa1.78□□□□□ -2.12
VPS13A-209ENST00000467124 PQLC2LA1A4F0 135 aa1.78□□□□□ -2.12
VPS13A-209ENST00000467124 SERPINA1P01009 418 aa1.78□□□□□ -2.12
VPS13A-209ENST00000467124 IGKV1-5P01602 117 aa1.78□□□□□ -2.12
VPS13A-209ENST00000467124 TTRP02766 147 aa1.78□□□□□ -2.12
VPS13A-209ENST00000467124 SULT1A3P0DMM9 295 aa1.78□□□□□ -2.12
VPS13A-209ENST00000467124 SULT1A4P0DMN0 295 aa1.78□□□□□ -2.12
VPS13A-209ENST00000467124 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
VPS13A-209ENST00000467124 SUPT4H1P63272 117 aaKnown RBP1.78□□□□□ -2.12
VPS13A-209ENST00000467124 CTAG1AP78358 180 aa1.78□□□□□ -2.12
VPS13A-209ENST00000467124 RPL18Q07020 188 aaKnown RBP1.78□□□□□ -2.12
VPS13A-209ENST00000467124 TAF1AQ15573 450 aaPredicted RBP1.78□□□□□ -2.12
VPS13A-209ENST00000467124 TMEM155Q4W5P6 130 aa1.78□□□□□ -2.12
VPS13A-209ENST00000467124 FAM27BQ5VT28 67 aa1.78□□□□□ -2.12
VPS13A-209ENST00000467124 LYZL1Q6UWQ5 148 aa1.78□□□□□ -2.12
VPS13A-209ENST00000467124 MRPL30Q8TCC3 161 aaKnown RBP1.78□□□□□ -2.12
VPS13A-209ENST00000467124 CMSS1Q9BQ75 279 aaKnown RBP1.78□□□□□ -2.12
VPS13A-209ENST00000467124 DERL1Q9BUN8 251 aa1.78□□□□□ -2.12
VPS13A-209ENST00000467124 TRIM4Q9C037 500 aa1.78□□□□□ -2.12
VPS13A-209ENST00000467124 COMMD5Q9GZQ3 224 aa1.78□□□□□ -2.12
VPS13A-209ENST00000467124 PSTPIP2Q9H939 334 aa1.78□□□□□ -2.12
VPS13A-209ENST00000467124 DOK5Q9P104 306 aa1.78□□□□□ -2.12
VPS13A-209ENST00000467124 FBXO5Q9UKT4 447 aa1.78□□□□□ -2.12
VPS13A-209ENST00000467124 IGHV3-64A0A075B6Q5 118 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 IGHV1-18A0A0C4DH31 117 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 HMSDA8MTL9 139 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 LY6LH3BQJ8 138 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 NOS1APO75052 506 aaPredicted RBP1.77□□□□□ -2.13
VPS13A-209ENST00000467124 IGHV3-7P01780 117 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 RPS4Y1P22090 263 aaKnown RBP1.77□□□□□ -2.13
VPS13A-209ENST00000467124 HIST1H2BOP23527 126 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 PSMB8P28062 276 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 HIST1H2BBP33778 126 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 HIST1H2BDP58876 126 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 HIST1H2BCP62807 126 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 MRPS25P82663 173 aaKnown RBP1.77□□□□□ -2.13
VPS13A-209ENST00000467124 EDDM3AQ14507 147 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 HIST2H2BEQ16778 126 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.77□□□□□ -2.13
VPS13A-209ENST00000467124 DCANP1Q8TF63 244 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 DNAJC9Q8WXX5 260 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 HIST1H2BHQ93079 126 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 TSPAN32Q96QS1 320 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 HIST1H2BNQ99877 126 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 HIST1H2BMQ99879 126 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 CXCL16Q9H2A7 254 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 IDI2-AS1Q9NZ38 188 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 RSL24D1Q9UHA3 163 aaKnown RBP1.77□□□□□ -2.13
VPS13A-209ENST00000467124 RALGAPA2Q2PPJ7 1873 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 ITGB4P16144 1822 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 CACNA1GO43497 2377 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 ICE1Q9Y2F5 2266 aa1.77□□□□□ -2.13
VPS13A-209ENST00000467124 RTEL1-TNFRSF6BF6WH68 1400 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 NCKAP5O14513 1909 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 ZNF532Q9HCE3 1301 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 IGLV3-9A0A075B6K5 115 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 A0A0D9SEW6 157 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 EXOC1LA0A1B0GW35 172 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 hADV38S2A0JD32 116 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 DPRXA6NFQ7 191 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 FABP5P3A8MUU1 101 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 ZNF705FA8MVS1 300 aaPredicted RBP1.76□□□□□ -2.13
VPS13A-209ENST00000467124 SLC22A1O15245 554 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 PDE6DO43924 150 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 TRGC1P0CF51 173 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 SMIM17P0DL12 118 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms