RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 PSMB11A5LHX3 300 aa11.92□□□□□ -0.5
NPHP4-205ENST00000466897 NPIPB5A8MRT5 1133 aa11.92□□□□□ -0.5
NPHP4-205ENST00000466897 H3BUA1 57 aa11.92□□□□□ -0.5
NPHP4-205ENST00000466897 IGHG4P01861 327 aa11.92□□□□□ -0.5
NPHP4-205ENST00000466897 CHRNA7P36544 502 aa11.92□□□□□ -0.5
NPHP4-205ENST00000466897 SPCS3P61009 180 aa11.92□□□□□ -0.5
NPHP4-205ENST00000466897 ASPHD1Q5U4P2 390 aa11.92□□□□□ -0.5
NPHP4-205ENST00000466897 UNQ5815/PRO19632Q6UWF5 114 aa11.92□□□□□ -0.5
NPHP4-205ENST00000466897 KLHDC1Q8N7A1 406 aa11.92□□□□□ -0.5
NPHP4-205ENST00000466897 LFNGQ8NES3 379 aa11.92□□□□□ -0.5
NPHP4-205ENST00000466897 OR5M8Q8NGP6 311 aa11.92□□□□□ -0.5
NPHP4-205ENST00000466897 MDFIQ99750 246 aa11.92□□□□□ -0.5
NPHP4-205ENST00000466897 FAM103A1Q9BTL3 118 aaKnown RBP11.92□□□□□ -0.5
NPHP4-205ENST00000466897 HSPB7Q9UBY9 170 aa11.92□□□□□ -0.5
NPHP4-205ENST00000466897 ALG5Q9Y673 324 aa11.92□□□□□ -0.5
NPHP4-205ENST00000466897 IGLC7A0M8Q6 106 aa11.91□□□□□ -0.5
NPHP4-205ENST00000466897 G3V318 75 aa11.91□□□□□ -0.5
NPHP4-205ENST00000466897 IGLV1-40P01703 118 aa11.91□□□□□ -0.5
NPHP4-205ENST00000466897 CRYGCP07315 174 aa11.91□□□□□ -0.5
NPHP4-205ENST00000466897 MYOD1P15172 320 aa11.91□□□□□ -0.5
NPHP4-205ENST00000466897 ECSCRQ19T08 205 aa11.91□□□□□ -0.5
NPHP4-205ENST00000466897 KLK9Q2XQG4 91 aa11.91□□□□□ -0.5
NPHP4-205ENST00000466897 CENPVQ7Z7K6 275 aaPredicted RBP11.91□□□□□ -0.5
NPHP4-205ENST00000466897 TTC9CQ8N5M4 171 aa11.91□□□□□ -0.5
NPHP4-205ENST00000466897 RNF152Q8N8N0 203 aa11.91□□□□□ -0.5
NPHP4-205ENST00000466897 FAM110DQ8TAY7 271 aaPredicted RBP11.91□□□□□ -0.5
NPHP4-205ENST00000466897 WFDC12Q8WWY7 111 aa11.91□□□□□ -0.5
NPHP4-205ENST00000466897 FYTTD1Q96QD9 318 aaKnown RBP11.91□□□□□ -0.5
NPHP4-205ENST00000466897 LINC00527Q9UJ94 153 aa11.91□□□□□ -0.5
NPHP4-205ENST00000466897 KLK9Q9UKQ9 250 aa11.91□□□□□ -0.5
NPHP4-205ENST00000466897 MPTX1A8MV57 137 aa11.9□□□□□ -0.5
NPHP4-205ENST00000466897 IFNA17P01571 189 aa11.9□□□□□ -0.5
NPHP4-205ENST00000466897 OPN1MWP04001 364 aa11.9□□□□□ -0.5
NPHP4-205ENST00000466897 ELANEP08246 267 aa11.9□□□□□ -0.5
NPHP4-205ENST00000466897 OPN1MW2P0DN77 364 aa11.9□□□□□ -0.5
NPHP4-205ENST00000466897 OPN1MW3P0DN78 364 aa11.9□□□□□ -0.5
NPHP4-205ENST00000466897 TNFRSF9Q07011 255 aa11.9□□□□□ -0.5
NPHP4-205ENST00000466897 FOXE3Q13461 319 aa11.9□□□□□ -0.5
NPHP4-205ENST00000466897 TEX38Q6PEX7 206 aa11.9□□□□□ -0.5
NPHP4-205ENST00000466897 UXS1Q8NBZ7 420 aa11.9□□□□□ -0.5
NPHP4-205ENST00000466897 OR4D5Q8NGN0 318 aa11.9□□□□□ -0.5
NPHP4-205ENST00000466897 OR1S1Q8NH92 325 aa11.9□□□□□ -0.5
NPHP4-205ENST00000466897 PLEKHA3Q9HB20 300 aa11.9□□□□□ -0.5
NPHP4-205ENST00000466897 WSB1Q9Y6I7 421 aa11.9□□□□□ -0.5
NPHP4-205ENST00000466897 HMX3A6NHT5 357 aa11.89□□□□□ -0.51
NPHP4-205ENST00000466897 SSNA1O43805 119 aa11.89□□□□□ -0.51
NPHP4-205ENST00000466897 LY86O95711 162 aa11.89□□□□□ -0.51
NPHP4-205ENST00000466897 CTRB1P17538 263 aa11.89□□□□□ -0.51
NPHP4-205ENST00000466897 PSMB8P28062 276 aa11.89□□□□□ -0.51
NPHP4-205ENST00000466897 PSMB6P28072 239 aa11.89□□□□□ -0.51
NPHP4-205ENST00000466897 WT1-ASQ06250 92 aa11.89□□□□□ -0.51
NPHP4-205ENST00000466897 IAH1Q2TAA2 248 aaPredicted RBP11.89□□□□□ -0.51
NPHP4-205ENST00000466897 CTRB2Q6GPI1 263 aa11.89□□□□□ -0.51
NPHP4-205ENST00000466897 GSG1LQ6UXU4 331 aa11.89□□□□□ -0.51
NPHP4-205ENST00000466897 ZBTB8BQ8NAP8 495 aaPredicted RBP11.89□□□□□ -0.51
NPHP4-205ENST00000466897 ZNF114Q8NC26 417 aa11.89□□□□□ -0.51
NPHP4-205ENST00000466897 OR4X2Q8NGF9 303 aa11.89□□□□□ -0.51
NPHP4-205ENST00000466897 OR10C1Q96KK4 312 aa11.89□□□□□ -0.51
NPHP4-205ENST00000466897 SOX15O60248 233 aa11.88□□□□□ -0.51
NPHP4-205ENST00000466897 FBXO24O75426 580 aa11.88□□□□□ -0.51
NPHP4-205ENST00000466897 MED6O75586 246 aa11.88□□□□□ -0.51
NPHP4-205ENST00000466897 AREGP15514 252 aa11.88□□□□□ -0.51
NPHP4-205ENST00000466897 ID3Q02535 119 aa11.88□□□□□ -0.51
NPHP4-205ENST00000466897 OR2C3Q8N628 320 aa11.88□□□□□ -0.51
NPHP4-205ENST00000466897 OR5AU1Q8NGC0 362 aa11.88□□□□□ -0.51
NPHP4-205ENST00000466897 OR10W1Q8NGF6 305 aa11.88□□□□□ -0.51
NPHP4-205ENST00000466897 OR1L6Q8NGR2 347 aa11.88□□□□□ -0.51
NPHP4-205ENST00000466897 MYOZ3Q8TDC0 251 aa11.88□□□□□ -0.51
NPHP4-205ENST00000466897 C2orf50Q96LR7 162 aa11.88□□□□□ -0.51
NPHP4-205ENST00000466897 SLA2Q9H6Q3 261 aa11.88□□□□□ -0.51
NPHP4-205ENST00000466897 C5orf51A6NDU8 294 aa11.87□□□□□ -0.51
NPHP4-205ENST00000466897 CCSO14618 274 aa11.87□□□□□ -0.51
NPHP4-205ENST00000466897 NKX2-1P43699 371 aaPredicted RBP11.87□□□□□ -0.51
NPHP4-205ENST00000466897 ERHP84090 104 aaKnown RBP11.87□□□□□ -0.51
NPHP4-205ENST00000466897 IL15RAQ13261 267 aa11.87□□□□□ -0.51
NPHP4-205ENST00000466897 C2orf68Q2NKX9 166 aa11.87□□□□□ -0.51
NPHP4-205ENST00000466897 BSXQ3C1V8 233 aa11.87□□□□□ -0.51
NPHP4-205ENST00000466897 ZNF329Q86UD4 541 aa11.87□□□□□ -0.51
NPHP4-205ENST00000466897 HINT2Q9BX68 163 aa11.87□□□□□ -0.51
NPHP4-205ENST00000466897 ENY2Q9NPA8 101 aa11.87□□□□□ -0.51
NPHP4-205ENST00000466897 TRBV9A0A0B4J1U6 114 aa11.86□□□□□ -0.51
NPHP4-205ENST00000466897 C13orf42A0A1B0GVH6 325 aa11.86□□□□□ -0.51
NPHP4-205ENST00000466897 HAX1O00165 279 aa11.86□□□□□ -0.51
NPHP4-205ENST00000466897 GOSR2O14653 212 aa11.86□□□□□ -0.51
NPHP4-205ENST00000466897 CYB5BO43169 146 aa11.86□□□□□ -0.51
NPHP4-205ENST00000466897 APELAP0DMC3 54 aa11.86□□□□□ -0.51
NPHP4-205ENST00000466897 OR13C7P0DN81 318 aa11.86□□□□□ -0.51
NPHP4-205ENST00000466897 HIST1H1BP16401 226 aaKnown RBP11.86□□□□□ -0.51
NPHP4-205ENST00000466897 HOXA1P49639 335 aaPredicted RBP11.86□□□□□ -0.51
NPHP4-205ENST00000466897 ATP5IP56385 69 aaPredicted RBP11.86□□□□□ -0.51
NPHP4-205ENST00000466897 CYCSP99999 105 aaKnown RBP11.86□□□□□ -0.51
NPHP4-205ENST00000466897 SRSF4Q08170 494 aaKnown RBP11.86□□□□□ -0.51
NPHP4-205ENST00000466897 CXorf66Q5JRM2 361 aaPredicted RBP11.86□□□□□ -0.51
NPHP4-205ENST00000466897 C10orf99Q6UWK7 81 aa11.86□□□□□ -0.51
NPHP4-205ENST00000466897 OR5T1Q8NG75 326 aa11.86□□□□□ -0.51
NPHP4-205ENST00000466897 OR1P1Q8NH06 330 aa11.86□□□□□ -0.51
NPHP4-205ENST00000466897 DTD1Q8TEA8 209 aa11.86□□□□□ -0.51
NPHP4-205ENST00000466897 ASB13Q8WXK3 278 aa11.86□□□□□ -0.51
NPHP4-205ENST00000466897 CITED1Q99966 193 aa11.86□□□□□ -0.51
NPHP4-205ENST00000466897 ZNF747Q9BV97 191 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms