RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 P2RX4Q99571 388 aa10.66□□□□□ -0.7
LIMD1-203ENST00000465039 NDUFA4L2Q9NRX3 87 aa10.66□□□□□ -0.7
LIMD1-203ENST00000465039 NOTCH1P46531 2555 aa10.65□□□□□ -0.7
LIMD1-203ENST00000465039 A0A0B4J2A0 478 aa10.65□□□□□ -0.7
LIMD1-203ENST00000465039 A0A1W2PRX2 142 aa10.65□□□□□ -0.7
LIMD1-203ENST00000465039 I3L521 148 aa10.65□□□□□ -0.7
LIMD1-203ENST00000465039 IGKV1-5P01602 117 aa10.65□□□□□ -0.7
LIMD1-203ENST00000465039 TRGV3P03979 118 aa10.65□□□□□ -0.7
LIMD1-203ENST00000465039 CTRB1P17538 263 aa10.65□□□□□ -0.7
LIMD1-203ENST00000465039 PSMB6P28072 239 aa10.65□□□□□ -0.7
LIMD1-203ENST00000465039 SUPT4H1P63272 117 aaKnown RBP10.65□□□□□ -0.7
LIMD1-203ENST00000465039 CTRB2Q6GPI1 263 aa10.65□□□□□ -0.7
LIMD1-203ENST00000465039 LRTM2Q8N967 370 aa10.65□□□□□ -0.7
LIMD1-203ENST00000465039 OR4A16Q8NH70 328 aa10.65□□□□□ -0.7
LIMD1-203ENST00000465039 FYTTD1Q96QD9 318 aaKnown RBP10.65□□□□□ -0.7
LIMD1-203ENST00000465039 GPR61Q9BZJ8 451 aa10.65□□□□□ -0.7
LIMD1-203ENST00000465039 COA4Q9NYJ1 87 aa10.65□□□□□ -0.7
LIMD1-203ENST00000465039 SHPKQ9UHJ6 478 aa10.65□□□□□ -0.7
LIMD1-203ENST00000465039 OR51B2Q9Y5P1 312 aa10.65□□□□□ -0.7
LIMD1-203ENST00000465039 TRAV3A0A0B4J244 114 aa10.64□□□□□ -0.71
LIMD1-203ENST00000465039 A0A1B0GW64 132 aa10.64□□□□□ -0.71
LIMD1-203ENST00000465039 CGB1A6NKQ9 187 aa10.64□□□□□ -0.71
LIMD1-203ENST00000465039 CCL24O00175 119 aa10.64□□□□□ -0.71
LIMD1-203ENST00000465039 LYRM1O43325 122 aa10.64□□□□□ -0.71
LIMD1-203ENST00000465039 OR8U8P0C7N1 319 aa10.64□□□□□ -0.71
LIMD1-203ENST00000465039 AKR1C4P17516 323 aa10.64□□□□□ -0.71
LIMD1-203ENST00000465039 BTCP35070 178 aa10.64□□□□□ -0.71
LIMD1-203ENST00000465039 HSPE1P61604 102 aaKnown RBP10.64□□□□□ -0.71
LIMD1-203ENST00000465039 PRCDQ00LT1 54 aa10.64□□□□□ -0.71
LIMD1-203ENST00000465039 TMEM187Q14656 261 aa10.64□□□□□ -0.71
LIMD1-203ENST00000465039 SP6Q3SY56 376 aa10.64□□□□□ -0.71
LIMD1-203ENST00000465039 PDLIM3Q53GG5 364 aaPredicted RBP10.64□□□□□ -0.71
LIMD1-203ENST00000465039 ETV3LQ6ZN32 361 aa10.64□□□□□ -0.71
LIMD1-203ENST00000465039 C8orf86Q6ZUL3 223 aa10.64□□□□□ -0.71
LIMD1-203ENST00000465039 LGI3Q8N145 548 aa10.64□□□□□ -0.71
LIMD1-203ENST00000465039 LINC00482Q8N8I6 264 aa10.64□□□□□ -0.71
LIMD1-203ENST00000465039 OR5T1Q8NG75 326 aa10.64□□□□□ -0.71
LIMD1-203ENST00000465039 ATP6V0BQ99437 205 aa10.64□□□□□ -0.71
LIMD1-203ENST00000465039 MCRIP2Q9BUT9 160 aaKnown RBP10.64□□□□□ -0.71
LIMD1-203ENST00000465039 ALX4Q9H161 411 aaPredicted RBP10.64□□□□□ -0.71
LIMD1-203ENST00000465039 THYN1Q9P016 225 aa10.64□□□□□ -0.71
LIMD1-203ENST00000465039 TEX50A0A1B0GTY4 177 aa10.63□□□□□ -0.71
LIMD1-203ENST00000465039 C13orf42A0A1B0GVH6 325 aa10.63□□□□□ -0.71
LIMD1-203ENST00000465039 E7EUB6 86 aa10.63□□□□□ -0.71
LIMD1-203ENST00000465039 PLA2G10O15496 165 aa10.63□□□□□ -0.71
LIMD1-203ENST00000465039 UPK1BO75841 260 aa10.63□□□□□ -0.71
LIMD1-203ENST00000465039 ZNF616Q08AN1 781 aa10.63□□□□□ -0.71
LIMD1-203ENST00000465039 ASAH1Q13510 395 aa10.63□□□□□ -0.71
LIMD1-203ENST00000465039 TMEM268Q5VZI3 342 aa10.63□□□□□ -0.71
LIMD1-203ENST00000465039 LCNL1Q6ZST4 164 aa10.63□□□□□ -0.71
LIMD1-203ENST00000465039 TMED4Q7Z7H5 227 aa10.63□□□□□ -0.71
LIMD1-203ENST00000465039 SELENOHQ8IZQ5 122 aaKnown RBP10.63□□□□□ -0.71
LIMD1-203ENST00000465039 ZNF114Q8NC26 417 aa10.63□□□□□ -0.71
LIMD1-203ENST00000465039 OR52E5Q8NH55 327 aa10.63□□□□□ -0.71
LIMD1-203ENST00000465039 RNASE11Q8TAA1 199 aaKnown RBP10.63□□□□□ -0.71
LIMD1-203ENST00000465039 RCC1LQ96I51 464 aaKnown RBP10.63□□□□□ -0.71
LIMD1-203ENST00000465039 RAX2Q96IS3 184 aa10.63□□□□□ -0.71
LIMD1-203ENST00000465039 ZNF355PQ9NSJ1 428 aa10.63□□□□□ -0.71
LIMD1-203ENST00000465039 SLC25A6P12236 298 aa10.62□□□□□ -0.71
LIMD1-203ENST00000465039 AREGP15514 252 aa10.62□□□□□ -0.71
LIMD1-203ENST00000465039 CCR6P51684 374 aa10.62□□□□□ -0.71
LIMD1-203ENST00000465039 RAB25P57735 213 aa10.62□□□□□ -0.71
LIMD1-203ENST00000465039 RHOGP84095 191 aa10.62□□□□□ -0.71
LIMD1-203ENST00000465039 NMSQ5H8A3 153 aa10.62□□□□□ -0.71
LIMD1-203ENST00000465039 MZT2BQ6NZ67 158 aa10.62□□□□□ -0.71
LIMD1-203ENST00000465039 ZNF343Q6P1L6 599 aa10.62□□□□□ -0.71
LIMD1-203ENST00000465039 LHFPL5Q8TAF8 219 aa10.62□□□□□ -0.71
LIMD1-203ENST00000465039 PDCD10Q9BUL8 212 aa10.62□□□□□ -0.71
LIMD1-203ENST00000465039 GNB4Q9HAV0 340 aa10.62□□□□□ -0.71
LIMD1-203ENST00000465039 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.62□□□□□ -0.71
LIMD1-203ENST00000465039 IGLV11-55A0A075B6I3 123 aa10.61□□□□□ -0.71
LIMD1-203ENST00000465039 A0A0B4J293 547 aa10.61□□□□□ -0.71
LIMD1-203ENST00000465039 HMX3A6NHT5 357 aa10.61□□□□□ -0.71
LIMD1-203ENST00000465039 RBMXL2O75526 392 aaKnown RBP10.61□□□□□ -0.71
LIMD1-203ENST00000465039 SFT2D2O95562 160 aa10.61□□□□□ -0.71
LIMD1-203ENST00000465039 HSPB1P04792 205 aaKnown RBP10.61□□□□□ -0.71
LIMD1-203ENST00000465039 ZP3P21754 424 aa10.61□□□□□ -0.71
LIMD1-203ENST00000465039 VAMP1P23763 118 aa10.61□□□□□ -0.71
LIMD1-203ENST00000465039 WT1-ASQ06250 92 aa10.61□□□□□ -0.71
LIMD1-203ENST00000465039 SLC35G3Q8N808 338 aa10.61□□□□□ -0.71
LIMD1-203ENST00000465039 OR1N2Q8NGR9 330 aa10.61□□□□□ -0.71
LIMD1-203ENST00000465039 OR1P1Q8NH06 330 aa10.61□□□□□ -0.71
LIMD1-203ENST00000465039 CXorf58Q96LI9 332 aa10.61□□□□□ -0.71
LIMD1-203ENST00000465039 MS4A10Q96PG2 267 aa10.61□□□□□ -0.71
LIMD1-203ENST00000465039 FANCD2OSQ96PS1 177 aa10.61□□□□□ -0.71
LIMD1-203ENST00000465039 PLEKHA3Q9HB20 300 aa10.61□□□□□ -0.71
LIMD1-203ENST00000465039 RANGRFQ9HD47 186 aaPredicted RBP10.61□□□□□ -0.71
LIMD1-203ENST00000465039 TMED3Q9Y3Q3 217 aa10.61□□□□□ -0.71
LIMD1-203ENST00000465039 F11RQ9Y624 299 aaKnown RBP10.61□□□□□ -0.71
LIMD1-203ENST00000465039 A0A1B0GU03 582 aa10.6□□□□□ -0.71
LIMD1-203ENST00000465039 DBX1A6NMT0 343 aa10.6□□□□□ -0.71
LIMD1-203ENST00000465039 LINC01619G3V211 115 aa10.6□□□□□ -0.71
LIMD1-203ENST00000465039 WIPF1O43516 503 aa10.6□□□□□ -0.71
LIMD1-203ENST00000465039 SULT1A3P0DMM9 295 aa10.6□□□□□ -0.71
LIMD1-203ENST00000465039 SULT1A4P0DMN0 295 aa10.6□□□□□ -0.71
LIMD1-203ENST00000465039 OR13C7P0DN81 318 aa10.6□□□□□ -0.71
LIMD1-203ENST00000465039 DEFA4P12838 97 aa10.6□□□□□ -0.71
LIMD1-203ENST00000465039 CD33P20138 364 aa10.6□□□□□ -0.71
LIMD1-203ENST00000465039 MECP2P51608 486 aaKnown RBP10.6□□□□□ -0.71
LIMD1-203ENST00000465039 SPCS3P61009 180 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms